58 Matching Annotations
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  2. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Mutational Signatures and Clonal Hematopoiesis in Intestinal Metaplasia across Countries with Varying Stomach Cancer Incidence
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    pmc.ncbi.nlm.nih.gov/articles/PMC13056296/
  3. Jan 2026
  4. www.sciencedirect.com www.sciencedirect.com
    Spatial transcriptomics reveals altered communities and drivers of aberrant epithelia and pro-fibrotic fibroblasts in interstitial lung diseases
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    sciencedirect.com/science/article/pii/S2666979X25003222
  5. Aug 2024
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    Moving Toward Findable, Accessible, Interoperable, Reusable Practices in Epidemiologic Research
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    academic.oup.com/aje/article/192/6/995/7048632
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    Babesia microti Variant With Multiple Resistance Mutations Detected in an Immunocompromised Patient Receiving Atovaquone Prophylaxis
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    academic.oup.com/ofid/article/10/3/ofad097/7055919
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    Neuropathological features of SARS-CoV-2 delta and omicron variants
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    academic.oup.com/jnen/article/82/4/283/7058984
  9. genomemedicine.biomedcentral.com genomemedicine.biomedcentral.com
    Interplay of Mendelian and polygenic risk factors in Arab breast cancer patients
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    genomemedicine.biomedcentral.com/articles/10.1186/s13073-023-01220-4
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    Regulation of human interferon signaling by transposon exonization
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    biorxiv.org/content/10.1101/2023.09.11.557241v1
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    Mpox Viral Lineage Analysis and Technique Development Using Next Generation Sequencing Approach
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    academic.oup.com/jid/advance-article/doi/10.1093/infdis/jiad504/7424306
  12. Mar 2024
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    PANOPLY: a cloud-based platform for automated and reproducible proteogenomic data analysis
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    ncbi.nlm.nih.gov/pmc/articles/PMC8791030/
  14. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Pathogen genomics in public health laboratories: successes, challenges, and lessons learned from California’s SARS-CoV-2 Whole-Genome Sequencing Initiative, California COVIDNet
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    ncbi.nlm.nih.gov/pmc/articles/PMC10327507/
  15. Dec 2023
  16. www.nature.com www.nature.com
    DNA methylation QTL mapping across diverse human tissues provides molecular links between genetic variation and complex traits
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    nature.com/articles/s41588-022-01248-z
  17. www.biorxiv.org www.biorxiv.org
    High-dimensional phenotyping to define the genetic basis of cellular morphology
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    biorxiv.org/content/10.1101/2023.01.09.522731v1
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    Scalable Nanopore sequencing of human genomes provides a comprehensive view of haplotype-resolved variation and methylation
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    nature.com/articles/s41592-023-01993-x
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    TP53-mediated clonal hematopoiesis confers increased risk for incident atherosclerotic disease
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    nature.com/articles/s44161-022-00206-6
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    Jasmine and Iris: population-scale structural variant comparison and analysis
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    nature.com/articles/s41592-022-01753-3
  21. journals.plos.org journals.plos.org
    Sequencing-based fine-mapping and in silico functional characterization of the 10q24.32 arsenic metabolism efficiency locus across multiple arsenic-exposed populations
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    journals.plos.org/plosgenetics/article
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    Compressed phenotypic screens for complex multicellular models and high-content assays
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    biorxiv.org/content/10.1101/2023.01.23.525189v1
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    Systematically characterizing the roles of E3-ligase family members in inflammatory responses with massively parallel Perturb-seq
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    biorxiv.org/content/10.1101/2023.01.23.525198v1
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    A panel-agnostic strategy ‘HiPPo’ improves diagnostic efficiency in the UK Genome Medicine Service
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    ncbi.nlm.nih.gov/pmc/articles/PMC9915838/
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    High-depth sequencing characterization of viral dynamics across tissues in fatal COVID-19 reveals compartmentalized infection
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    nature.com/articles/s41467-022-34256-y
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    Evaluation of the portability of computable phenotypes with natural language processing in the eMERGE network
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    nature.com/articles/s41598-023-27481-y
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    Rapid Lineage Assignment of Severe Acute Respiratory Syndrome Coronavirus 2 Cases through Automated Library Preparation, Sequencing, and Bioinformatic Analysis
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    sciencedirect.com/science/article/pii/S1525157823000211
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    A single-cell map of antisense oligonucleotide activity in the brain
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    biorxiv.org/content/10.1101/2023.02.14.528473v1
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    Genome-Wide Identification of Variants Associated with Antifungal Drug Resistance
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    link.springer.com/protocol/10.1007/978-1-0716-3155-3_7
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    Comparing genomic variant identification protocols for Candida auris
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    ncbi.nlm.nih.gov/pmc/articles/PMC10210944/
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    Clinical and Echocardiographic Diversity Associated With Physical Fitness in the Project Baseline Health Study: Implications for Heart Failure Staging
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    sciencedirect.com/science/article/pii/S1071916423001495
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    Single duplex DNA sequencing with CODEC detects mutations with high sensitivity
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    Applications of single-cell RNA sequencing in drug discovery and development
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    Genome-wide Association Identifies Novel Etiological Insights Associated with Parkinson’s Disease in African and African Admixed Populations
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    ncbi.nlm.nih.gov/pmc/articles/PMC10312852/
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    Mechanism-guided quantification of LINE-1 reveals p53 regulation of both retrotransposition and transcription
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    biorxiv.org/content/10.1101/2023.05.11.539471v1
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    B-cell-specific checkpoint molecules that regulate anti-tumour immunity
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    TheiaEuk: a species-agnostic bioinformatics workflow for fungal genomic characterization
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    Moving beyond the desktop: prospects for practical bioimage analysis via the web
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    ncbi.nlm.nih.gov/pmc/articles/PMC10409478/
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    High-throughput complement component 4 genomic sequence analysis with C4Investigator
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    onlinelibrary.wiley.com/doi/full/10.1111/tan.15273
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    Exposure of iPSC-derived human microglia to brain substrates enables the generation and manipulation of diverse transcriptional states in vitro
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    nature.com/articles/s41590-023-01558-2
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    Club-like cells in proliferative inflammatory atrophy of the prostate
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    pathsocjournals.onlinelibrary.wiley.com/doi/full/10.1002/path.6149
  42. www.mdpi.com www.mdpi.com
    Transient SARS-CoV-2 RNA-Dependent RNA Polymerase Mutations after Remdesivir Treatment for Chronic COVID-19 in Two Transplant Recipients: Case Report and Intra-Host Viral Genomic Investigation
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    mdpi.com/2076-2607/11/8/2096
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    Single-nucleotide variant calling in single-cell sequencing data with Monopogen
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    nature.com/articles/s41587-023-01873-x
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    GATK-gCNV enables the discovery of rare copy number variants from exome sequencing data
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    Serratia marcescens Outbreak at a Correctional Facility: Environmental Sampling, Laboratory Analyses and Genomic Characterization to Assess Sources and Persistence
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    mdpi.com/1660-4601/20/17/6709
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    TSC2 inactivation, low mutation burden and high macrophage infiltration characterise hepatic angiomyolipomas
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    onlinelibrary.wiley.com/doi/full/10.1111/his.15005
  47. www.biorxiv.org www.biorxiv.org
    Resolution of ring chromosomes, Robertsonian translocations, and complex structural variants from long-read sequencing and telomere-to-telomere assembly
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    biorxiv.org/content/10.1101/2023.09.07.555775v1
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    Genomic Surveillance Reveals the Rapid Expansion of the XBB Lineage among Circulating SARS-CoV-2 Omicron Lineages in Southeastern Wisconsin, USA
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    mdpi.com/1999-4915/15/9/1940
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    TIM-4 Identifies Effector B Cells Expressing An IL-23-Driven Proinflammatory Cytokine Module That Promotes Immune Responses
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    biorxiv.org/content/10.1101/2023.09.22.558524v1
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    Implementation of California COVIDNet – a multi-sector collaboration for statewide SARS-CoV-2 genomic surveillance
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    ncbi.nlm.nih.gov/pmc/articles/PMC10627185/
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    Multitissue H3K27ac profiling of GTEx samples links epigenomic variation to disease
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    pmc.ncbi.nlm.nih.gov/articles/PMC10562256/
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    Leading the pack: Best practices in comparative canine cancer genomics to inform human oncology
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    onlinelibrary.wiley.com/doi/full/10.1111/vco.12935
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    Contribution and therapeutic implications of retroelement insertions in ataxia telangiectasia
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    sciencedirect.com/science/article/pii/S000292972300321X
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    Metadata integrity in bioinformatics: Bridging the gap between data and knowledge
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    sciencedirect.com/science/article/pii/S2001037023003616
  55. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Exome copy number variant detection, analysis and classification in a large cohort of families with undiagnosed rare genetic disease
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    ncbi.nlm.nih.gov/pmc/articles/PMC10593084/
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    Community spread of a human monkeypox virus variant with a tecovirimat resistance-associated mutation | Antimicrobial Agents and Chemotherapy
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    journals.asm.org/doi/10.1128/aac.00972-23
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    CD8+ lymphocytes are critical for early control of tuberculosis in macaques
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    pmc.ncbi.nlm.nih.gov/articles/PMC10579699/
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    Single cell transcriptional profiling of benign prostatic hyperplasia reveals a progenitor-like luminal epithelial cell state within an inflammatory microenvironment
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    biorxiv.org/content/10.1101/2023.11.06.565375v1
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    Transcriptional profile of the rat cardiovascular system at single cell resolution
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    biorxiv.org/content/10.1101/2023.11.14.567085v1
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    National Cancer Institute Imaging Data Commons: Toward Transparency, Reproducibility, and Scalability in Imaging Artificial Intelligence
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    pubs.rsna.org/doi/10.1148/rg.230180
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    Giotto Suite: a multi-scale and technology-agnostic spatial multi-omics analysis ecosystem
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    biorxiv.org/content/10.1101/2023.11.26.568752v1
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    Identification of constrained sequence elements across 239 primate genomes
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    The Complete Sequence and Comparative Analysis of Ape Sex Chromosomes
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    biorxiv.org/content/10.1101/2023.11.30.569198v1