3 Matching Annotations
  1. Last 7 days
    1. Disease: Von-willebrand Disorder

      Patient: 21 yo, female, Italian descent

      Variant: VWF NM_000552.5 c:C3379 > T p.(P1127S), homozygous

      Heterozygous and Homozygous polymorphic variant in exon 25

      Phenotypes: Bleeding Score System (BSS) = 3 minor bruising normal menstrual bleeding

      Family: (father paternity confirmed) Father suffered from rectorrhagia for rectal polyps Mother (same variant, heterozygous) has heavy menstrual bleeding, epistaxis events up to age 30, BBS= 2

      Present in dbSNP (rs139579968) MAF in European pop = 0.0001-0.0004

      Present in gnomAD, said to be present in 2 transcripts in VWF 40 alleles are present

      Predictions: listed with PolyPhen-2 and SIFT = probably damaging to protein expression/function

      CADD (score =33) and REVEL(score = 0.748) suggest deleterious effect of pathogenic variant

      I-TASSER showed large difference in 3D configuration of sequences differing by a single amino acid.

  2. Jul 2017