principal
Key Points:
- A principal responsibility of the clinical microbiology laboratory is to determine which antimicrobial agents inhibit a specific bacterial isolate.
- Two general approaches to susceptibility testing are phenotypic testing (exposure of the bacterial isolate to antibiotics) and genotypic testing (detection of resistance genes).
- Phenotypic testing can determine a categorical response (susceptible, resistant, intermediate, or susceptible dose-dependent) or the minimal inhibitory concentration (MIC), the lowest concentration of antibiotic that inhibits visible bacterial growth.
- Determining the minimal bactericidal concentration (MBC) involves subculturing the tubes in which no growth is seen to find the lowest antibiotic concentration that reduces the number of viable bacteria by 99.9%.
- Quantitative susceptibility testing using microbroth dilution in microwell plates or other miniaturized testing platforms is common in clinical laboratories.
- Genotypic tests are accurate when few genes highly likely cause resistance to specific antibiotics. They can provide results faster than phenotypic tests.
- FDA-approved genotypic tests are available for methicillin resistance in S. aureus, vancomycin resistance in Enterococcus species, and carbapenem resistance in enteric gram-negative bacilli.
- With the advent of many new agents for treating yeasts and systemic fungal infections, susceptibility testing of yeasts and fungi has increased. It can be specific for species rather than for genera.
- Mold susceptibility testing remains technically challenging and time-consuming and is usually performed in commercial or reference laboratories. For most antifungals, an MIC is reported, but for echinocandins, a minimum effective concentration (MEC) is reported.
| Testing Type | Methodology | Utility | Limitations | |--------------|-------------|---------|-------------| | Phenotypic Susceptibility Testing | Exposure of bacterial isolate to antibiotics and measurement of the effect on growth | Determines the response of bacteria to various antibiotics | May not capture all forms of resistance | | Genotypic Susceptibility Testing | Detection of resistance genes | Provides quick results, often a day or two faster than phenotypic tests | Accurate only when few genes are known to confer resistance to specific antibiotics | | MIC Determination | Finding the lowest concentration of antibiotic that inhibits visible bacterial growth | Used for precision in antibiotic therapy | None | | MBC Determination | Subculturing to find the lowest antibiotic concentration that reduces bacterial count by 99.9% | Gives an understanding of the bactericidal effect of antibiotics | Time-consuming | | Quantitative Susceptibility Testing | Microbroth dilution in microwell plates or other miniaturized testing platforms | Widely used in clinical laboratories | None | | Susceptibility Testing of Yeasts and Fungi | Similar to bacterial susceptibility testing but with additional parameters | Needed with the advent of new antifungal agents | Mold susceptibility testing is challenging and time-consuming |