LITERATURE CITED1. Arama E, Agapite J,
References are extremely long. Author put a lot of background research into this before ever creating full work.
LITERATURE CITED1. Arama E, Agapite J,
References are extremely long. Author put a lot of background research into this before ever creating full work.
4.1.1.4. P5 specificity.
Complex sub-titles prove that there are many parts to this article, not just abstract, literature review, etc.
In this method, called PROTOMAP, ex-tract from healthy or apoptotic cells is fraction-ated by sodium dodecyl sulfate-polyacrylamidegel electrophoresis. Each of several gel slicesis digested with trypsin, and the resulting pep-tides are identified by liquid chromatographyMS/MS.
Even with a large biology background in High School, I only understood a few words from this. The language is especially aimed towards very experienced backgrounds in the field.
0 Research Article Estimating the reproducibility of psychological science Open Science Collaboration*,†+ Author Affiliations*All authors with their affiliations appear at the end of this paper.↵†Corresponding author. E-mail: nosek@virginia.edu Science 28 Aug 2015:Vol. 349, Issue 6251, DOI: 10.1126/science.aac4716 All authors with their affiliations appear at the end of this paper. Article Figures & Data Info & Metrics eLetters PDF Empirically analyzing empirical evidenceOne of the central goals in any scientific endeavor is to understand causality. Experiments that seek to demonstrate a cause/effect relation most often manipulate the postulated causal factor. Aarts et al. describe the replication of 100 experiments reported in papers published in 2008 in three high-ranking psychology journals. Assessing whether the replication and the original experiment yielded the same result according to several criteria, they find that about one-third to one-half of the original findings were also observed in the replication study.Science, this issue 10.1126/science.aac4716Structured AbstractINTRODUCTIONReproducibility is a defining feature of science, but the extent to which it characterizes current research is unknown. Scientific claims should not gain credence because of the status or authority of their originator but by the replicability of their supporting evidence. Even research of exemplary quality may have irreproducible empirical findings because of random or systematic error.RATIONALEThere is concern about the rate and predictors of reproducibility, but limited evidence. Potentially problematic practices include selective reporting, selective analysis, and insufficient specification of the conditions necessary or sufficient to obtain the results. Direct replication is the attempt to recreate the conditions believed sufficient for obtaining a previously observed finding and is the means of establishing reproducibility of a finding with new data. We conducted a large-scale, collaborative effort to obtain an initial estimate of the reproducibility of psychological science.RESULTSWe conducted replications of 100 experimental and correlational studies published in three psychology journals using high-powered designs and original materials when available. There is no single standard for evaluating replication success. Here, we evaluated reproducibility using significance and P values, effect sizes, subjective assessments of replication teams, and meta-analysis of effect sizes. The mean effect size (r) of the replication effects (Mr = 0.197, SD = 0.257) was half the magnitude of the mean effect size of the original effects (Mr = 0.403, SD = 0.188), representing a substantial decline. Ninety-seven percent of original studies had significant results (P < .05). Thirty-six percent of replications had significant results; 47% of original effect sizes were in the 95% confidence interval of the replication effect size; 39% of effects were subjectively rated to have replicated the original result; and if no bias in original results is assumed, combining original and replication results left 68% with statistically significant effects. Correlational tests suggest that replication success was better predicted by the strength of original evidence than by characteristics of the original and replication teams.CONCLUSIONNo single indicator sufficiently describes replication success, and the five indicators examined here are not the only ways to evaluate reproducibility. Nonetheless, collectively these results offer a clear conclusion: A large portion of replications produced weaker evidence for the original findings despite using materials provided by the original authors, review in advance for methodological fidelity, and high statistical power to detect the original effect sizes. Moreover, correlational evidence is consistent with the conclusion that variation in the strength of initial evidence (such as original P value) was more predictive of replication success than variation in the characteristics of the teams conducting the research (such as experience and expertise). The latter factors certainly can influence replication success, but they did not appear to do so here.Reproducibility is not well understood because the incentives for individual scientists prioritize novelty over replication. Innovation is the engine of discovery and is vital for a productive, effective scientific enterprise. However, innovative ideas become old news fast. Journal reviewers and editors may dismiss a new test of a published idea as unoriginal. The claim that “we already know this” belies the uncertainty of scientific evidence. Innovation points out paths that are possible; replication points out paths that are likely; progress relies on both. Replication can increase certainty when findings are reproduced and promote innovation when they are not. This project provides accumulating evidence for many findings in psychological research and suggests that there is still more work to do to verify whether we know what we think we know. <img class="fragment-image" src="https://d2ufo47lrtsv5s.cloudfront.net/content/sci/349/6251/aac4716/F1.medium.gif"/> Download high-res image Open in new tab Download Powerpoint Original study effect size versus replication effect size (correlation coefficients).Diagonal line represents replication effect size equal to original effect size. Dotted line represents replication effect size of 0. Points below the dotted line were effects in the opposite direction of the original. Density plots are separated by significant (blue) and nonsignificant (red) effects. AbstractReproducibility is a defining feature of science, but the extent to which it characterizes current research is unknown. We conducted replications of 100 experimental and correlational studies published in three psychology journals using high-powered designs and original materials when available. Replication effects were half the magnitude of original effects, representing a substantial decline. Ninety-seven percent of original studies had statistically significant results. Thirty-six percent of replications had statistically significant results; 47% of original effect sizes were in the 95% confidence interval of the replication effect size; 39% of effects were subjectively rated to have replicated the original result; and if no bias in original results is assumed, combining original and replication results left 68% with statistically significant effects. Correlational tests suggest that replication success was better predicted by the strength of original evidence than by characteristics of the original and replication teams.Reproducibility is a core principle of scientific progress (1–6). Scientific claims should not gain credence because of the status or authority of their originator but by the replicability of their supporting evidence. Scientists attempt to transparently describe the methodology and resulting evidence used to support their claims. Other scientists agree or disagree whether the evidence supports the claims, citing theoretical or methodological reasons or by collecting new evidence. Such debates are meaningless, however, if the evidence being debated is not reproducible.Even research of exemplary quality may have irreproducible empirical findings because of random or systematic error. Direct replication is the attempt to recreate the conditions believed sufficient for obtaining a previously observed finding (7, 8) and is the means of establishing reproducibility of a finding with new data. A direct replication may not obtain the original result for a variety of reasons: Known or unknown differences between the replication and original study may moderate the size of an observed effect, the original result could have been a false positive, or the replication could produce a false negative. False positives and false negatives provide misleading information about effects, and failure to identify the necessary and sufficient conditions to reproduce a finding indicates an incomplete theoretical understanding. Direct replication provides the opportunity to assess and improve reproducibility.There is plenty of concern (9–13) about the rate and predictors of reproducibility but limited evidence. In a theoretical analysis, Ioannidis estimated that publishing and analytic practices make it likely that more than half of research results are false and therefore irreproducible (9). Some empirical evidence supports this analysis. In cell biology, two industrial laboratories reported success replicating the original results of landmark findings in only 11 and 25% of the attempted cases, respectively (10, 11). These numbers are stunning but also difficult to interpret because no details are available about the studies, methodology, or results. With no transparency, the reasons for low reproducibility cannot be evaluated.Other investigations point to practices and incentives that may inflate the likelihood of obtaining false-positive results in particular or irreproducible results more generally. Potentially problematic practices include selective reporting, selective analysis, and insufficient specification of the conditions necessary or sufficient to obtain the results (12–23). We were inspired to address the gap in direct empirical evidence about reproducibility. In this Research Article, we report a large-scale, collaborative effort to obtain an initial estimate of the reproducibility of psychological science.MethodStarting in November 2011, we constructed a protocol for selecting and conducting high-quality replications (24). Collaborators joined the project, selected a study for replication from the available studies in the sampling frame, and were guided through the replication protocol. The replication protocol articulated the process of selecting the study and key effect from the available articles, contacting the original authors for study materials, preparing a study protocol and analysis plan, obtaining review of the protocol by the original authors and other members within the present project, registering the protocol publicly, conducting the replication, writing the final report, and auditing the process and analysis for quality control. Project coordinators facilitated each step of the process and maintained the protocol and project resources. Replication materials and data were required to be archived publicly in order to maximize transparency, accountability, and reproducibility of the project (https://osf.io/ezcuj).
Audience seems to be a range of people with experience/knowledge in this topic. Author uses words and abbreviations that would not make sense to the average viewer.
JPSP (n = 59 articles), JEP:LMC (n = 40 articles), and PSCI (n = 68 articles). From this pool of available studies, replications were selected and completed from JPSP (n = 32 studies), JEP:LMC (n = 28 studies), and PSCI (n = 40 studies) and were coded as representing cognitive (n = 43 studies) or social-personality (n = 57 studies) subdisciplines.
Reading becomes extremely confusing once abbreviations have been brought in, as the average reader has no knowledge of what they are.
There is no single standard for evaluating replication success (25). We evaluated reproducibility using significance and P values, effect sizes, subjective assessments of replication teams, and meta-analyses of effect sizes. All five of these indicators contribute information about the relations between the replication and original finding and the cumulative evidence about the effect and were positively correlated with one another (r ranged from 0.22 to 0.96, median r = 0.57).
I find this paragraph interesting, as it explains how there is no way to explain replication success, other than putting as many restraints as possible on each test and comparing them to the original.