BIDS_DIR= /PATH-TO-YOUR-DATA-DIRECTORY/
There should be no space after the "=".
BIDS_DIR= /PATH-TO-YOUR-DATA-DIRECTORY/
There should be no space after the "=".
base_dir, 'masks', 'csf.nii.gz'
Maybe we should use a local file or a file on DBIC, instead of the ".." one? There is one mask in /dartfs/rc/lab/D/DBIC/DBIC/psych160/masks
fmriprep singularity containers
should be free surfer license key?
--annex all
The --annex flag doesn't seem to work for Windows 11 and Ubuntu 22.04 (WSL2)