Collection of a docker images for bioinformatics. Large part of them (with debian/ prefix) are autogenerated using packages from Debian-Med (NeuroDebian contributes some there) in an image-per-package style

A review (wiki) by CWL project of approaches for "userspace containers" to solve the use case of running pipelines established using more recent (primarily) debian environments on HPC installations. Mentions projects such as proot, fakechroot, psuedo

A system for automating deployment, operations, and scaling of containerized applications originating from Google. It handles scheduling onto nodes in a compute cluster and actively manages workloads to ensure that their state matches the users declared intentions. Although with a primary accent on web services, I think it (or its ideas) could be of good use for managing collections of the execution environments. There is a nice FLOSS weekly podcast https://twit.tv/shows/floss-weekly/episodes/351 which introduces the platform and its abilities.

Approach similar to CDE (http://www.pgbovine.net/cde.html) for wrapping entirety of the execution environment into a redistributable and possibly reusable (? might not grab all dependencies which weren't excercised in particular analysis) bundle

Framework for unified containers construction

Now dominant container management solution