On 2015 Feb 23, ROSS LAZARUS commented:

In case anyone actually reads these, the tool factory has been upgraded to allow multiple input files, arbitrary user editable parameters and to support reproducible research through locking execution to a specific R/Perl/Python package dependency (must exist in the toolshed and be installed on the development Galaxy) - the tool factory 2 project website has moved to https://github.com/galaxyproject/tools-iuc/tree/master/tools/tool_factory_2 - support of the original tool factory at the bitbucket site will also continue but most users will probably want to move to the more flexible TF2.

On 2015 Feb 23, ROSS LAZARUS commented:

In case anyone actually reads these, the tool factory has been upgraded to allow multiple input files, arbitrary user editable parameters and to support reproducible research through locking execution to a specific R/Perl/Python package dependency (must exist in the toolshed and be installed on the development Galaxy) - the tool factory 2 project website has moved to https://github.com/galaxyproject/tools-iuc/tree/master/tools/tool_factory_2 - support of the original tool factory at the bitbucket site will also continue but most users will probably want to move to the more flexible TF2.