6 Matching Annotations
  1. Jul 2018
    1. On 2017 Feb 05, Stuart RAY commented:

      I appreciate Prof Pybus' response, and have no objection to this use of the "Simplot" name; I was just providing context.


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    2. On 2017 Feb 01, Oliver Pybus commented:

      I named the method "Deep Simplot" in homage to the very popular Simplot program. I apologise to Prof Ray and his colleagues for (i) not seeking their permission to use this term and (ii) not citing the original Simplot paper. To avoid confusion I recommend that, in future, the method described by our paper is referred to as "deep divergence plotting". My thanks to Prof Ray for bringing this issue to my attention.


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    3. On 2017 Jan 31, Stuart RAY commented:

      As the author of Simplot (Lole KS, 1999) I infer that the "Deep Simplot" method described was named after Simplot; it also shares characteristic display elements (as seen in figure 3b). Of course, the bootscanning approach that I implemented in Simplot was pioneered by Mika Salminen et al (Salminen MO, 1995, which is cited by Iles et al.).


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  2. Feb 2018
    1. On 2017 Jan 31, Stuart RAY commented:

      As the author of Simplot (Lole KS, 1999) I infer that the "Deep Simplot" method described was named after Simplot; it also shares characteristic display elements (as seen in figure 3b). Of course, the bootscanning approach that I implemented in Simplot was pioneered by Mika Salminen et al (Salminen MO, 1995, which is cited by Iles et al.).


      This comment, imported by Hypothesis from PubMed Commons, is licensed under CC BY.

    2. On 2017 Feb 01, Oliver Pybus commented:

      I named the method "Deep Simplot" in homage to the very popular Simplot program. I apologise to Prof Ray and his colleagues for (i) not seeking their permission to use this term and (ii) not citing the original Simplot paper. To avoid confusion I recommend that, in future, the method described by our paper is referred to as "deep divergence plotting". My thanks to Prof Ray for bringing this issue to my attention.


      This comment, imported by Hypothesis from PubMed Commons, is licensed under CC BY.

    3. On 2017 Feb 05, Stuart RAY commented:

      I appreciate Prof Pybus' response, and have no objection to this use of the "Simplot" name; I was just providing context.


      This comment, imported by Hypothesis from PubMed Commons, is licensed under CC BY.