DataBase
NARid: https://www.oxfordjournals.org/nar/database/summary/808
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
261 Matching Annotations
- Nov 2022
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dbtgr.hgc.jp dbtgr.hgc.jp
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manteia.igbmc.fr manteia.igbmc.frManteia1
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Manteia
NARid: https://www.oxfordjournals.org/nar/database/summary/1712
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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microsporidiadb.org microsporidiadb.org
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Search for
NARid: https://www.oxfordjournals.org/nar/database/summary/1422
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Unicellular eukaryotes genome databases
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www.wormqtl-hd.org www.wormqtl-hd.org
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WormQTL
NARid: https://www.oxfordjournals.org/nar/database/summary/1714
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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genomecrispr.dkfz.de genomecrispr.dkfz.de
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GenomeCRISPR
NARid: https://www.oxfordjournals.org/nar/database/summary/1958
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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bioinformatics.psb.ugent.be bioinformatics.psb.ugent.be
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access point
NARid: https://www.oxfordjournals.org/nar/database/summary/1752
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Unicellular eukaryotes genome databases
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antismash-db.secondarymetabolites.org antismash-db.secondarymetabolites.org
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antiSMASH
NARid: https://www.oxfordjournals.org/nar/database/summary/1949
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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archive.har.mrc.ac.uk archive.har.mrc.ac.uk
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National Mouse Archive
NARid: https://www.oxfordjournals.org/nar/database/summary/1369
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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proteininformationresource.org proteininformationresource.org
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BioThesaurus
NARid: https://www.oxfordjournals.org/nar/database/summary/915
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Genome annotation terms, ontologies and nomenclature
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www.diark.org www.diark.org
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diArk
NARid: https://www.oxfordjournals.org/nar/database/summary/1172
NARCategory: Genomics Databases (non-vertebrate) Subcategory: General genomics databases
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www.pseudomonas.com www.pseudomonas.com
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Pseudomonas Genome Database
NARid: https://www.oxfordjournals.org/nar/database/summary/733
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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HomoloGene
NARid: https://www.oxfordjournals.org/nar/database/summary/605
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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bacdive.dsmz.de bacdive.dsmz.de
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BacDive
NARid: https://www.oxfordjournals.org/nar/database/summary/1694
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Taxonomy and identification
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proconsortium.org proconsortium.org
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PRO
NARid: https://www.oxfordjournals.org/nar/database/summary/1327
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Genome annotation terms, ontologies and nomenclature
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www.mousephenotype.org www.mousephenotype.org
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IMPC data
NARid: https://www.oxfordjournals.org/nar/database/summary/1071 https://www.oxfordjournals.org/nar/database/summary/1711
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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Viral Genome Sequences
NARid: https://www.oxfordjournals.org/nar/database/summary/602 https://www.oxfordjournals.org/nar/database/summary/909
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Viral genome databases
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bioinfo-mml.sjtu.edu.cn bioinfo-mml.sjtu.edu.cnICEberg1
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ICEberg 2.0
NARid: https://www.oxfordjournals.org/nar/database/summary/1506
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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fungidb.org fungidb.orgFungiDB1
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Search for.
NARid: https://www.oxfordjournals.org/nar/database/summary/1509
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Fungal genome databases
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gowiki.tamu.edu gowiki.tamu.eduGONUTS1
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GONUTS
NARid: https://www.oxfordjournals.org/nar/database/summary/1561
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Genome annotation terms, ontologies and nomenclature
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prophecy.lundberg.gu.se prophecy.lundberg.gu.se
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PROPHECY Database
NARid: https://www.oxfordjournals.org/nar/database/summary/730
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Fungal genome databases
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H²DB
NARid: https://www.oxfordjournals.org/nar/database/summary/1637
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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hbvdb.lyon.inserm.fr hbvdb.lyon.inserm.fr
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The specialized Hepatitis B Virus
NARid: https://www.oxfordjournals.org/nar/database/summary/1618
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Viral genome databases
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BacWGSTdb
NARid: https://www.oxfordjournals.org/nar/database/summary/1867
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Taxonomy and identification
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eugenes.org eugenes.org
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euGenes
NARid: https://www.oxfordjournals.org/nar/database/summary/396
NARCategory: Human and other Vertebrate Genomes
Subcategory: Model organisms, comparative genomics
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chlamdb.ch chlamdb.ch
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Chlamydiae Database
NARid: https://www.oxfordjournals.org/nar/database/summary/2005
Category: Genomics Databases (non-vertebrate)
Subcategory: Prokaryotic genome databases
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www.effectors.org www.effectors.org
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EffectiveDB
NARid: https://www.oxfordjournals.org/nar/database/summary/1409
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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ontobee.org ontobee.orgOntobee1
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Ontobee
NARid: https://www.oxfordjournals.org/nar/database/summary/1938
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Genome annotation terms, ontologies and nomenclature
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URL
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dictybase.org dictybase.org
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dictyBase
NARid: https://www.oxfordjournals.org/nar/database/summary/446
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Unicellular eukaryotes genome databases
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LPSN
NARid: https://www.oxfordjournals.org/nar/database/summary/1697
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Taxonomy and identification
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www.bacterio.net www.bacterio.net
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LPSN
NARid: https://www.oxfordjournals.org/nar/database/summary/1697
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Taxonomy and identification
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hamap.expasy.org hamap.expasy.org
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HAMAP
NARid: https://www.oxfordjournals.org/nar/database/summary/1210
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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URL
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- Oct 2022
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subtiwiki.uni-goettingen.de subtiwiki.uni-goettingen.de
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Subti-Apps
NARid: https://www.oxfordjournals.org/nar/database/summary/110 https://www.oxfordjournals.org/nar/database/summary/1563
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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web.stanford.edu web.stanford.edu
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CauloBrowser
NARid: https://www.oxfordjournals.org/nar/database/summary/1865
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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www.inetbio.org www.inetbio.org
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MouseNetV2
NARid: https://www.oxfordjournals.org/nar/database/summary/1877
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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superfly.crg.eu superfly.crg.eu
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SuperFly
NARid: https://www.oxfordjournals.org/nar/database/summary/1796
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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pave.niaid.nih.gov pave.niaid.nih.govPaVE1
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the papillomavirus episteme
NARid: https://www.oxfordjournals.org/nar/database/summary/1619
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Viral genome databases
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mage.genoscope.cns.fr mage.genoscope.cns.fr
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MicroScope
NARid: https://www.oxfordjournals.org/nar/database/summary/1666
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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www.wdcm.org www.wdcm.org
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WFCC
NARid: https://www.oxfordjournals.org/nar/database/summary/1954
NAR Category: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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oikoarrays.biology.uiowa.edu oikoarrays.biology.uiowa.edu
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database
NARid: https://www.oxfordjournals.org/nar/database/summary/1639
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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pede.dna.affrc.go.jp pede.dna.affrc.go.jp
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database site
NARid: https://www.oxfordjournals.org/nar/database/summary/556
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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www.ridom.de www.ridom.de
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Ridom
NARid: https://www.oxfordjournals.org/nar/database/summary/299
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Taxonomy and identification
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hieranoidb.sbc.su.se hieranoidb.sbc.su.se
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HieranoiDB
NARid: https://www.oxfordjournals.org/nar/database/summary/1959
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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gold.jgi.doe.gov gold.jgi.doe.gov
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Genomes Online Database
NARid: https://www.oxfordjournals.org/nar/database/summary/2110
NARCategory: Genomics Databases (non-vertebrate) Subcategory: General genomics databases
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www.mg-rast.org www.mg-rast.orgMG-RAST1
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for programmatic access visit our API site
NARid: https://www.oxfordjournals.org/nar/database/summary/1860
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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www.ebi.ac.uk www.ebi.ac.uk
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Gene Ontology Annotation
NARid: https://www.oxfordjournals.org/nar/database/summary/389
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Genome annotation terms, ontologies and nomenclature
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viralzone.expasy.org viralzone.expasy.org
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VIRALZONE
NARid: https://www.oxfordjournals.org/nar/database/summary/1337
NAR Category: Genomics Databases (non-vertebrate) Subcategory: Viral genome databases
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www.microbesonline.org www.microbesonline.org
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Add genomes
NARid: https://www.oxfordjournals.org/nar/database/summary/1358
NAR Category: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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www.phytopathdb.org www.phytopathdb.org
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PhytoPath
NARid: https://www.oxfordjournals.org/nar/database/summary/1868
NARCategory: Genomics Databases (non-vertebrate) Subcategory: General genomics databases
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tolweb.org tolweb.org
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Tree of Life
NARid: https://www.oxfordjournals.org/nar/database/summary/301
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Taxonomy and identification
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www.mgc.ac.cn www.mgc.ac.cn
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virulence factor database
NARid: https://www.oxfordjournals.org/nar/database/summary/760
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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www.informatics.jax.org www.informatics.jax.org
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MGI
NARid: https://www.oxfordjournals.org/nar/database/summary/124
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Model organisms, comparative genomics
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identifiers.org identifiers.org
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Identifiers.org
NARid: https://www.oxfordjournals.org/nar/database/summary/1502
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Genome annotation terms, ontologies and nomenclature
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URL
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www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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Using BioProject
NARid: https://www.oxfordjournals.org/nar/database/summary/916
NARCategory: Genomics Databases (non-vertebrate) Subcategory: General genomics databases
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origin.tubic.org origin.tubic.orgDEG1
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Essential genes
NARid: https://www.oxfordjournals.org/nar/database/summary/445
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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bioinfo-mml.sjtu.edu.cn bioinfo-mml.sjtu.edu.cnSecReT41
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SecReT4
NARid: https://www.oxfordjournals.org/nar/database/summary/1576
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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www.iith.ac.in www.iith.ac.inEK3D1
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EK3D
NARid: https://www.oxfordjournals.org/nar/database/summary/1866
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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mycocosm.jgi.doe.gov mycocosm.jgi.doe.govMycocosm1
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Search for JGI Data
NARid: https://www.oxfordjournals.org/nar/database/summary/1704
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Fungal genome databases
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hgtree.snu.ac.kr hgtree.snu.ac.krHGTree1
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HGTree database
NARid: https://www.oxfordjournals.org/nar/database/summary/1862
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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geneontology.org geneontology.org
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GO Consortium
NARid: https://www.oxfordjournals.org/nar/database/summary/487
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Genome annotation terms, ontologies and nomenclature
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funsimmat.bioinf.mpi-inf.mpg.de funsimmat.bioinf.mpi-inf.mpg.de
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FunSimMat
NARid: https://www.oxfordjournals.org/nar/database/summary/1075
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Genome annotation terms, ontologies and nomenclature
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www.infrafrontier.eu www.infrafrontier.eu
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INFRAFRONTIER
NARid: https://www.oxfordjournals.org/nar/database/summary/1370
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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URL
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- Sep 2022
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github.com github.com
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http://www.mir2disease.org
NARid: https://www.oxfordjournals.org/nar/database/summary/1234
NARCategory: RNA sequence databases
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www.pathbase.net www.pathbase.netPathbase1
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Pathbase
NARid: https://www.oxfordjournals.org/nar/database/summary/554
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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URL
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cistrome.org cistrome.org
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Home
NARid: https://www.oxfordjournals.org/nar/database/summary/1957
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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statistics
stats
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veupathdb.org veupathdb.org
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VEuPathDB
NARid: https://www.oxfordjournals.org/nar/database/summary/969
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Unicellular eukaryotes genome databases
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URL
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ophid.utoronto.ca ophid.utoronto.ca
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Search Drug-Gene Interactions
NARid: https://www.oxfordjournals.org/nar/database/summary/1623
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Fungal genome databases
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URL
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tisdb.human.cornell.edu tisdb.human.cornell.eduTIS_base1
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translation initiation sites
NARid: https://www.oxfordjournals.org/nar/database/summary/1713
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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URL
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v3.ogee.info v3.ogee.infoOGEE1
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OGEE
NARid: https://www.oxfordjournals.org/nar/database/summary/1527
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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img.jgi.doe.gov img.jgi.doe.gov
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IMG/M
NARid: https://www.wikidata.org/wiki/Q113986847
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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URL
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img.jgi.doe.gov img.jgi.doe.gov
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Integrated Microbial Genomes
NARid: https://www.oxfordjournals.org/nar/database/summary/828
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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genolist.pasteur.fr genolist.pasteur.fr
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GenoList
NARid: https://www.oxfordjournals.org/nar/database/summary/1077
NARCategory: Genomics Databases (non-vertebrate) Subcategory: General genomics databases
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URL
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nhprtr.org nhprtr.org
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NHPRTR
NARid: https://www.oxfordjournals.org/nar/database/summary/1638
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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services.cbib.u-bordeaux.fr services.cbib.u-bordeaux.frMG 3.01
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MolliGen
NARid: https://www.oxfordjournals.org/nar/database/summary/534
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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www.treefam.org www.treefam.org
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TreeFam
NARid: https://www.oxfordjournals.org/nar/database/summary/875
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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Annotators
URL
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www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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RefSeq
NARid: https://www.oxfordjournals.org/nar/database/summary/126
NARCategory: Genomics Databases (non-vertebrate)
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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URL
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supfam.org supfam.org
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dcGO
NARid: https://www.oxfordjournals.org/nar/database/summary/1616
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Genome annotation terms, ontologies and nomenclature
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Annotators
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www.yeastrc.org www.yeastrc.org
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Yeast Resource Center
NARid: https://www.oxfordjournals.org/nar/database/summary/763
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Fungal genome databases
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URL
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www.inetbio.org www.inetbio.org
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YeastNet
NARid: https://www.oxfordjournals.org/nar/database/summary/1705
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Fungal genome databases
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Annotators
URL
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www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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Genome
NARid: https://www.oxfordjournals.org/nar/database/summary/458
NARCategory: Genomics Databases (non-vertebrate) Subcategory: General genomics databases
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URL
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iubmb.qmul.ac.uk iubmb.qmul.ac.uk
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Recommendations
NARid: https://www.oxfordjournals.org/nar/database/summary/513
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Genome annotation terms, ontologies and nomenclature
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igrcid.ibms.sinica.edu.tw igrcid.ibms.sinica.edu.tw
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IGRhCellID
NARid: https://www.oxfordjournals.org/nar/database/summary/1416
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Genome annotation terms, ontologies and nomenclature
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gencolors.leibniz-fli.de gencolors.leibniz-fli.de
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GenColors
NARid: https://www.oxfordjournals.org/nar/database/summary/1668
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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URL
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research.nhgri.nih.gov research.nhgri.nih.gov
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Zebrafish Insertion Collection
NARid: https://www.oxfordjournals.org/nar/database/summary/1640
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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URL
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research.bioinformatics.udel.edu research.bioinformatics.udel.edu
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free resource
NARid: https://www.oxfordjournals.org/nar/database/summary/129
NARCategory: Genomics Databases (non-vertebrate)
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meta.microbesonline.org meta.microbesonline.org
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metaMicrobesOnline
NARid: https://www.oxfordjournals.org/nar/database/summary/1620
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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URL
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tdrtargets.org tdrtargets.org
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TDR Targets
NARid: https://www.oxfordjournals.org/nar/database/summary/1178
NARategory: Genomics Databases (non-vertebrate) Subcategory: General genomics databases
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pbil.univ-lyon1.fr pbil.univ-lyon1.fr
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PhEVER
NARid: https://www.oxfordjournals.org/nar/database/summary/1432
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Viral genome databases
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www.genomicus.bio.ens.psl.eu www.genomicus.bio.ens.psl.eu
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Genomicus
NARid: https://www.oxfordjournals.org/nar/database/summary/121 https://www.oxfordjournals.org/nar/database/summary/1669
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Model organisms, comparative genomics
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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www.genome.wisc.edu www.genome.wisc.edu
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essential genes in E. coli
NARid: https://www.oxfordjournals.org/nar/database/summary/462
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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hpo.jax.org hpo.jax.org
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The Human Phenotype Ontology
NARid: https://www.oxfordjournals.org/nar/database/summary/1692
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Genome annotation terms, ontologies and nomenclature
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Annotators
URL
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www.treebase.org www.treebase.org
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TreeBASE
NARid: https://www.oxfordjournals.org/nar/database/summary/906
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Genome annotation terms, ontologies and nomenclature
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mgan.geni-act.org mgan.geni-act.orgMGAN1
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MGAN
NARid: https://www.oxfordjournals.org/nar/database/summary/1017
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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Online Mendelian Inheritance in Animals
NARid: https://www.oxfordjournals.org/nar/database/summary/548
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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4virology.net 4virology.net
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VBRC
NARid: https://www.oxfordjournals.org/nar/database/summary/725
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Viral genome databases
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gigadb.org gigadb.orgGigaDB1
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Dataset types
NARid: https://www.oxfordjournals.org/nar/database/summary/1992
NARCategory: Genomics Databases (non-vertebrate) Subcategory: General genomics databases
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www.brenda-enzymes.org www.brenda-enzymes.org
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Text-based queries
NARid: https://www.oxfordjournals.org/nar/database/summary/1301
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Genome annotation terms, ontologies and nomenclature
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ngdc.cncb.ac.cn ngdc.cncb.ac.cniDog1
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iDog
NARid: https://www.oxfordjournals.org/nar/database/summary/1798
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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- Aug 2022
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www.tbdb.org www.tbdb.org
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Gene ressources
NARid: https://www.oxfordjournals.org/nar/database/summary/1203
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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Consensus CDS
NARid: https://www.oxfordjournals.org/nar/database/summary/35 https://www.oxfordjournals.org/nar/database/summary/911
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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ww25.ecoliwiki.net ww25.ecoliwiki.net
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Ecoliwiki.net
NARid: https://www.oxfordjournals.org/nar/database/summary/1562
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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cryptodb.org cryptodb.orgCryptoDB1
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Resources
NARid: https://www.oxfordjournals.org/nar/database/summary/439
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Unicellular eukaryotes genome databases
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Shigella is a group of Gram-negative
NARid: https://www.oxfordjournals.org/nar/database/summary/865
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www.yeastgenome.org www.yeastgenome.org
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Saccharomyces Genome Database (SGD)
NARid: https://www.oxfordjournals.org/nar/database/summary/357
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Fungal genome databases
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www.patricbrc.org www.patricbrc.orgPATRIC1
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PATRIC
NARid: https://www.oxfordjournals.org/nar/database/summary/1000
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compbio.soe.ucsc.edu compbio.soe.ucsc.edu
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This site contains
NARid: https://www.oxfordjournals.org/nar/database/summary/342
NARCategory: Nucleotide Sequence Databases Subcategory: Gene structure, introns and exons, splice sites
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Fungal genome databases
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viperdb.scripps.edu viperdb.scripps.edu
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Highlights
NARid: https://www.oxfordjournals.org/nar/database/summary/761
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toxodb.org toxodb.orgToxoDB1
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VEuPathDB
NARid: https://www.oxfordjournals.org/nar/database/summary/359
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www.diatomics.biologie.ens.fr www.diatomics.biologie.ens.fr
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Diatoms are eukaryotic
NARid: https://www.oxfordjournals.org/nar/database/summary/662
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www.glycosciences.de www.glycosciences.de
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Glycosciences.DB
NARid: https://www.oxfordjournals.org/nar/database/summary/300
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www.glycosciences.de www.glycosciences.de
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database
NARid: https://www.oxfordjournals.org/nar/database/summary/988
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www.glycosciences.de www.glycosciences.de
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Glycosciences.de
NARId: https://www.oxfordjournals.org/nar/database/summary/652
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www.genome3d.eu www.genome3d.eu
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genome3d
NARid: https://www.oxfordjournals.org/nar/database/summary/1614
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bioinformatics.ramapo.edu bioinformatics.ramapo.edu
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GRSDB2
NARid: https://www.oxfordjournals.org/nar/database/summary/820
NARCategory: RNA sequence databases
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caps.ncbs.res.in caps.ncbs.res.inIMOTdb1
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iMOTdb
NARid: https://www.oxfordjournals.org/nar/database/summary/829
NARCategory: Structure Databases Subcategory: Protein structure NARCategory: Metabolic and Signaling Pathways Subcategory: Protein-protein interactions
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dorina.mdc-berlin.de dorina.mdc-berlin.dedoRiNA1
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doRiNA
NARid: https://www.oxfordjournals.org/nar/database/summary/1463
NARCategory: RNA sequence databases
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polyasite.unibas.ch polyasite.unibas.ch
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portal to the curated
NARid: https://www.oxfordjournals.org/nar/database/summary/2004
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mirdb.org mirdb.org
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miRDB
NARid: https://www.oxfordjournals.org/nar/database/summary/1760 https://www.oxfordjournals.org/nar/database/summary/2070
NARCategory: RNA sequence databases
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brp.kfshrc.edu.sa brp.kfshrc.edu.sa
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AU-Rich
NARid: https://www.oxfordjournals.org/nar/database/summary/34 NARCategory: Nucleotide Sequence Databases
https://www.oxfordjournals.org/nar/database/summary/232 NARCategory: RNA sequence databases
wd: https://www.wikidata.org/wiki/Q113587472
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mpd.bioinf.uni-sb.de mpd.bioinf.uni-sb.de
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Enter
NARid: https://www.oxfordjournals.org/nar/database/summary/1921 https://www.oxfordjournals.org/nar/database/summary/2071
NARCategory: RNA sequence databases
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dashr1.lisanwanglab.org dashr1.lisanwanglab.org
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DASHR
NARid: https://www.oxfordjournals.org/nar/database/summary/1840
NARCategory: RNA sequence databases
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trna.bioinf.uni-leipzig.de trna.bioinf.uni-leipzig.de
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Introduction
NARid: https://www.oxfordjournals.org/nar/database/summary/251
NARCategory: RNA sequence databases
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srv00.recas.ba.infn.it srv00.recas.ba.infn.it
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REDIportal
NARid: https://www.oxfordjournals.org/nar/database/summary/1962
NARCategory: RNA sequence databases
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greengenes.lbl.gov greengenes.lbl.gov
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Index
NARid: https://www.oxfordjournals.org/nar/database/summary/878
NARCategory: RNA sequence databases
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dianalab.e-ce.uth.gr dianalab.e-ce.uth.gr
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Total Entries: 1080276
stats
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120.110.158.132:8787 120.110.158.132:8787YM500v31
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YM500
NARid: https://www.oxfordjournals.org/nar/database/summary/1601
NARCategory: RNA sequence databases
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www.rna-society.org www.rna-society.orgHome1
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ViRBase
NARid: https://www.oxfordjournals.org/nar/database/summary/1791
NARCategory: RNA sequence databases
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konulab.fen.bilkent.edu.tr konulab.fen.bilkent.edu.tr
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database
NARid: https://www.oxfordjournals.org/nar/database/summary/1455
NARCategory: RNA sequence databases
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www.mirbase.org www.mirbase.orgmiRBase1
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miRBase
NARid: https://www.oxfordjournals.org/nar/database/summary/529
NARCategory: RNA sequence databases
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www.iresite.org www.iresite.org
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IRESite
NARid: https://www.oxfordjournals.org/nar/database/summary/831
NARCategory: RNA sequence databases
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snoopy.med.miyazaki-u.ac.jp snoopy.med.miyazaki-u.ac.jp
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snOPY
NARid: https://www.oxfordjournals.org/nar/database/summary/1750
NARCategory: RNA sequence databases
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bio-bigdata.hrbmu.edu.cn bio-bigdata.hrbmu.edu.cn
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LincSNP 3.0
NARid: https://www.oxfordjournals.org/nar/database/summary/1918
NARCategory: RNA sequence databases
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deny.tsinghua.edu.cn deny.tsinghua.edu.cn提示1
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登录服务
NARid: https://www.oxfordjournals.org/nar/database/summary/984
NARCategory: RNA sequence databases
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111.198.139.65 111.198.139.65POSTAR31
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POSTAR3
NARid: https://www.oxfordjournals.org/nar/database/summary/1922 https://www.oxfordjournals.org/nar/database/summary/2049
NARCategory: RNA sequence databases
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crdd.osdd.net crdd.osdd.net
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VIRsiRNAdb
NARid: https://www.oxfordjournals.org/nar/database/summary/1467
NARCategory: RNA sequence databases
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genome.bioch.virginia.edu genome.bioch.virginia.edu
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tRFs
NARid: https://www.oxfordjournals.org/nar/database/summary/1770
NARCategory: RNA sequence databases
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starbase.sysu.edu.cn starbase.sysu.edu.cn
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starBase
NARid: https://www.oxfordjournals.org/nar/database/summary/1447
NARCategory: RNA sequence databases
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lncipedia.org lncipedia.org
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LNCipedia
NARid: https://www.oxfordjournals.org/nar/database/summary/1599 https://www.oxfordjournals.org/nar/database/summary/2040
NARCategory: RNA sequence databases
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diana.e-ce.uth.gr diana.e-ce.uth.gr
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database
NARid: https://www.oxfordjournals.org/nar/database/summary/1598
NARCategory: RNA sequence databases
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pirnabank.ibab.ac.in pirnabank.ibab.ac.in
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piRNABank
NARid: https://www.oxfordjournals.org/nar/database/summary/1114
NARCategory: RNA sequence databases
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www.ezlab.org www.ezlab.org
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Bioinformatics
NARid:https://www.oxfordjournals.org/nar/database/summary/1232
NARCategory: RNA sequence databases
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people.biochem.umass.edu people.biochem.umass.edu
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3D RIBOSOMAL MODIFICATION MAPS DATABASE
NARid: https://www.oxfordjournals.org/nar/database/summary/1041
NARCategory: RNA sequence databases
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combio.pl combio.pl
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5S rRNA Database
NARid: https://www.oxfordjournals.org/nar/database/summary/230
NARCategory: RNA sequence databases
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rhesus.amu.edu.pl rhesus.amu.edu.pl
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miRNEST
NARid: https://www.oxfordjournals.org/nar/database/summary/1465
NARCategory: RNA sequence databases
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www.rna-society.org www.rna-society.org
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RNALocate
NARid: https://www.oxfordjournals.org/nar/database/summary/1925
NARCategory: RNA sequence databases
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mirgator.kobic.re.kr mirgator.kobic.re.kr
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miRGator
NARid: https://www.oxfordjournals.org/nar/database/summary/1098
NARCategory: RNA sequence databases
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www.smallrnagroup-mainz.de www.smallrnagroup-mainz.de
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smallrnagroup
NARid: https://www.oxfordjournals.org/nar/database/summary/1841
NARCategory: RNA sequence databases
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c1.accurascience.com c1.accurascience.com
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miRNA
NARid: https://www.oxfordjournals.org/nar/database/summary/1278
NARCategory: RNA sequence databases
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ngdc.cncb.ac.cn ngdc.cncb.ac.cn
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LncRNAWiki
NARid: https://www.oxfordjournals.org/nar/database/summary/1768
NARCategory: RNA sequence databases
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tpsic.igcz.poznan.pl tpsic.igcz.poznan.pl
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tRNA database
NARid: https://www.oxfordjournals.org/nar/database/summary/2084
NARCategory: RNA sequence databases
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compgenomics.utsa.edu compgenomics.utsa.edu
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(MeT-DB
NARid: https://www.oxfordjournals.org/nar/database/summary/1771
NARCategory: RNA sequence databases
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sysbio.gzzoc.com sysbio.gzzoc.com
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RPFdb
NARid: https://www.oxfordjournals.org/nar/database/summary/1842
NARCategory: RNA sequence databases
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sysbio.gzzoc.com sysbio.gzzoc.com
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Current curation
stats
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bioinformatics.psb.ugent.be bioinformatics.psb.ugent.be
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the European ribosomal RNA database
NARid: https://www.oxfordjournals.org/nar/database/summary/463
NARCategory: RNA sequence databases
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iimcb.genesilico.pl iimcb.genesilico.pl
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RNA Bricks
NARid: https://www.oxfordjournals.org/nar/database/summary/1688
NARCategory: Structure Databases Subcategory: Nucleic acid structure
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iimcb.genesilico.pl iimcb.genesilico.pl
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Staistics generated
stats
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3did.irbbarcelona.org 3did.irbbarcelona.org3did1
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database of three-dimensional interacting domain
NARid: https://www.oxfordjournals.org/nar/database/summary/633
NARCategory: Structure Databases Subcategory: Protein structure
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prodata.swmed.edu prodata.swmed.edu
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ECOD statistics
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www.ebi.ac.uk www.ebi.ac.uk
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integration
NARid: https://www.oxfordjournals.org/nar/database/summary/1615
NARCategory: Structure Databases
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www.ebi.ac.uk www.ebi.ac.uk
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SIFTS statistics
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cdb.ics.uci.edu cdb.ics.uci.edu
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Molecules
NARid: https://www.oxfordjournals.org/nar/database/summary/1023
NARCategory: Structure Databases Subcategory: Small molecules
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spock.genes.nig.ac.jp spock.genes.nig.ac.jp
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Genomes
NARid: https://www.oxfordjournals.org/nar/database/summary/322
NARCategory: Structure Databases Subcategory: Protein structure
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bioinformatics.charite.de bioinformatics.charite.demVOC 3.01
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mVOC 3.0 Database
NARid: https://www.oxfordjournals.org/nar/database/summary/1687
NARCategory: Structure Databases Subcategory: Small molecules
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- Jun 2022
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jowisz.ifpan.edu.pl jowisz.ifpan.edu.pl
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BSDB
NARid: https://www.oxfordjournals.org/nar/database/summary/1300
NARCategory: Structure Databases
Subcategory: Protein structure
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coiledcoils.chm.bris.ac.uk coiledcoils.chm.bris.ac.uk
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CC+
NARid: https://www.oxfordjournals.org/nar/database/summary/1215
NARCategory: Structure Databases
Subcategory: Protein structure
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pdbtm.enzim.hu pdbtm.enzim.hu
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PDBTM
NARid: https://www.oxfordjournals.org/nar/database/summary/619
NARCategory: Structure Databases
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www.minas.uzh.ch www.minas.uzh.ch
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MINAS
NARid: https://www.oxfordjournals.org/nar/database/summary/1485
NARCategory: Structure Databases
Subcategory: Nucleic acid structure
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swissmodel.expasy.org swissmodel.expasy.org
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SWISS-MODEL Repository
NARid: https://www.oxfordjournals.org/nar/database/summary/585
NARCategory: Structure Databases Subcategory: Protein structure
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caps.ncbs.res.in caps.ncbs.res.inPASS 2.71
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PASS2
NARid: https://www.oxfordjournals.org/nar/database/summary/275
NARCategory: Structure Databases
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sbi.imim.es sbi.imim.esArchDB1
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ArchDB
NARid: https://www.oxfordjournals.org/nar/database/summary/413
NARCategory: Structure Databases
Subcategory: Protein structure
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compbio.buffalo.edu compbio.buffalo.edu
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Decoys 'R' Us
NARid: https://www.oxfordjournals.org/nar/database/summary/385
NARCategory: Structure Databases
Subcategory: Protein structure
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www.genome.jp www.genome.jp
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KEGG GLYCAN
NARid: https://www.oxfordjournals.org/nar/database/summary/486
NARCategory: Structure Databases
Subcategory: Carbohydrates
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possum.cbrc.jp possum.cbrc.jpPoSSuM1
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PoSSuM
NARid: https://www.oxfordjournals.org/nar/database/summary/1499
NARCategory: Structure Databases
Subcategory: Protein structure
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jenalib.leibniz-fli.de jenalib.leibniz-fli.de
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Jena Library of Biological Macromolecules
NARid: https://www.oxfordjournals.org/nar/database/summary/267
NARCategory: Structure Databases
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ndbserver.rutgers.edu ndbserver.rutgers.edu
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NDB
NARid: https://www.oxfordjournals.org/nar/database/summary/272
NARCategory: Structure Databases
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scop.berkeley.edu scop.berkeley.edu
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SCOPe
NARid: https://www.oxfordjournals.org/nar/database/summary/255
NARCategory: Structure Databases
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molmovdb.mbb.yale.edu molmovdb.mbb.yale.edu
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Database
NARid: https://www.oxfordjournals.org/nar/database/summary/262
NARCategory: Structure Databases
Subcategory: Protein structure
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www.imgt.org www.imgt.org
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IMGT®
NARid: https://www.oxfordjournals.org/nar/database/summary/502
NARCategory: Structure Databases
Subcategory: Protein structure
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211.25.251.163 211.25.251.163InterRNA1
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InterRNA
NARid: https://www.oxfordjournals.org/nar/database/summary/1844
NARCategory: Structure Databases
Subcategory: Nucleic acid structure
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pubchem.ncbi.nlm.nih.gov pubchem.ncbi.nlm.nih.gov
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chemical information
NARid: vhttps://www.oxfordjournals.org/nar/database/summary/735
NARCategory: Structure Databases
Subcategory: Small molecules
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modbase.compbio.ucsf.edu modbase.compbio.ucsf.edu
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ModBase
NARid: https://www.oxfordjournals.org/nar/database/summary/331
NARCategory: Structure Databases
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crdd.osdd.net crdd.osdd.net
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Hemolytik
NARid: https://www.oxfordjournals.org/nar/database/summary/1686
NARCategory: Structure Databases
Subcategory: Small molecules
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- May 2022
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www.ccdc.cam.ac.uk www.ccdc.cam.ac.uk
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Cambridge Structural Database
NARid: https://www.oxfordjournals.org/nar/database/summary/261
NARCategory: Structure Databases
Subcategory: Small molecules
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www.bio2byte.be www.bio2byte.be
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Start2Fold
NARid: https://www.oxfordjournals.org/nar/database/summary/1852
NARCategory: Structure Databases
Subcategory: Protein structure
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pcddb.cryst.bbk.ac.uk pcddb.cryst.bbk.ac.uk
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PCDDB
NARid: https://www.oxfordjournals.org/nar/database/summary/1430
NARCategory: Structure Databases
Subcategory: Protein structure
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mmb.irbbarcelona.org mmb.irbbarcelona.org
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BIGNASim
NARid: https://www.oxfordjournals.org/nar/database/summary/1845
NARCategory: Structure Databases
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mmb.irbbarcelona.org mmb.irbbarcelona.org
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ParmBSC1
stats
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upjv.q4md-forcefieldtools.org upjv.q4md-forcefieldtools.org
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R.E.DD.B
NARId: https://www.oxfordjournals.org/nar/database/summary/1127
NARCategory: Structure Databases
Subcategory: Small molecules
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pdbj.org pdbj.org
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Statistics
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repeatsdb.org repeatsdb.org
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RepeatsDB
NARid: https://www.oxfordjournals.org/nar/database/summary/1691
NARCategory: Structure Databases
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www.bioinsilico.org www.bioinsilico.org
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CAPS - Database
NARid: https://www.oxfordjournals.org/nar/database/summary/1489
NARCategory: Structure Databases
Subcategory: Protein structure
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scop.mrc-lmb.cam.ac.uk scop.mrc-lmb.cam.ac.uk
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SCOP
NARid: https://www.oxfordjournals.org/nar/database/summary/282
NARCategory: Structure Databases
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rna.urmc.rochester.edu rna.urmc.rochester.edu
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Nearest Neighbor
NARid: https://www.oxfordjournals.org/nar/database/summary/1349
NARCategory: Structure Databases
Subcategory: Nucleic acid structure
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www.cgl.ucsf.edu www.cgl.ucsf.edu
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Download
NARid: https://www.oxfordjournals.org/nar/database/summary/583
NARCategory: Structure Databases
Subcategory: Protein structure
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pdbj.org pdbj.org
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PDBj
NARid: https://www.oxfordjournals.org/nar/database/summary/1487
NARCategory: Structure Databases
Subcategory: Protein structure
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cluster.physics.iisc.ernet.in cluster.physics.iisc.ernet.in
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Experiment Metho
NARid: https://www.oxfordjournals.org/nar/database/summary/384
NARCategory: Structure Databases
Subcategory: Protein structure
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pisite.sb.ecei.tohoku.ac.jp pisite.sb.ecei.tohoku.ac.jpPiSITE1
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PiSITE
NARid: https://www.oxfordjournals.org/nar/database/summary/1208
NARCategory: Structure Databases
Subcategory: Protein structure
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www.ebi.ac.uk www.ebi.ac.uk
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PDBsum
NARid: https://www.oxfordjournals.org/nar/database/summary/278
NARCategory: Structure Databases
Subcategory: Protein structure
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csdb.glycoscience.ru csdb.glycoscience.ru
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Version 2.
NARid: https://www.oxfordjournals.org/nar/database/summary/1904
NARCategory: Structure Databases Subcategory: Carbohydrates
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Annotators
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