The proband (II-9)
CaseII-9: Male, 38 years diagnosis, China, Asian
DiseaseAssertion: Hypertrophic cardiomyopathy
FamilyInfo: Proband's father (I-1) and mother (I-2) had histories of mild episodes of dizziness, no other symptoms reported in the other family members
CasePresentingHPOs: HP:0001279, HP:0001712, HP:0001639 (Syncope, Left ventricular hypertrophy, Hypertrophic cardiomyopathy)
HPOsFreeText: Heart rate 62 bpm, PR interval 172 ms, QRS complex duration 88 ms, Diffuse repolarization changes with a late-onset inverted T-wave pattern, LVMI 109.55 g/m2, MLVWT 24 mm, Ejection Fraction 70%
CaseNotHPOs: HP:0030148 (Heart murmur)
NotHPOsFreeText: N/A
CaseAddInfo: N/A
CasePreviousTesting: See Table 1
CaseGenotypingMethod: Genomic DNA was extracted from blood and amplified. It was then subjected to a sequencing panel with an Illumina sequencer based on the 96 genes related to cardiac function. All readings were aligned, with any variants confirmed by Sanger sequencing and filtered for pathogenicity.
Variant: NM_000257.3:c.5151T>A (p.His1717Gln)
CAID: CA389036862 https://reg.clinicalgenome.org/redmine/projects/registry/genboree_registry/allele?hgvs=NM_000257.3%3Ac.5151T%3EA
gnomAD: Not in gnomAD
Multiple Gene Variants:
KCNQ1 Variant
Variant: NM_000218.2:c.568C>T (p.Arg190Trp)
ClinVar: 53070 https://www.ncbi.nlm.nih.gov/clinvar/variation/53070/
gnomAD: Latino 2.896e-5, Overall 4.011e-6 https://gnomad.broadinstitute.org/variant/11-2591948-C-T
MYLK2 Variant
Variant: NM_033118.3:c.970A>G (p.Lys324Glu)
ClinVar: CA408526793 https://reg.clinicalgenome.org/redmine/projects/registry/genboree_registry/allele?hgvs=NM_033118.3%3Ac.970A%3EG
gnomAD: African 6.453e-5, Overall 4.087e-6 https://gnomad.broadinstitute.org/variant/20-30412153-A-G
TMEM70 Variant
Variant: NM_017866.5:c.440T>C (p.Ile147Thr)
ClinVar: 571761 https://www.ncbi.nlm.nih.gov/clinvar/variation/571761/
gnomAD: East Asian 4.893e-4, Overall 3.579e-5 https://gnomad.broadinstitute.org/variant/8-74893513-T-C