75 Matching Annotations
  1. May 2022
  2. nceas.github.io nceas.github.io
    Reproducible Analysis With R
    1
    1. dnkennedy 13 May 2022
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    nceas.github.io/sasap-training/materials/reproducible_research_in_r_fairbanks/
  3. Jun 2021
  4. neurodatascience.github.io neurodatascience.github.io
    QLSC 612 - Fundamentals for Neuro Data Science
    1
    1. dnkennedy 25 Jun 2021

      Fundamentals for Neuro Data Science

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    neurodatascience.github.io/QLS612-Overview/
  5. May 2021
  6. www.youtube.com www.youtube.com
    SEM 1: Confirmatory Factor Analysis (2021)
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    1. dnkennedy 21 May 2021

      Nice set of videos.

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    youtube.com/playlist
  7. Dec 2020
  8. fair-software.nl fair-software.nl
    FAIR Research Software
    1
    1. dnkennedy 14 Dec 2020
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    fair-software.nl/home
  9. Jul 2020
  10. frictionlessdata.io frictionlessdata.io
    Frictionless Data
    1
    1. dnkennedy 09 Jul 2020
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    frictionlessdata.io/
  11. gael-varoquaux.info gael-varoquaux.info
    Of software and Science. Reproducible science: what, why, and how -- Gaël Varoquaux: computer / data / brain science
    1
    1. dnkennedy 07 Jul 2020
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    gael-varoquaux.info/programming/of-software-and-science-reproducible-science-what-why-and-how.html
  12. Jun 2020
  13. www.utmb.edu www.utmb.edu
    Home | Center for Large Data Research and Data Sharing in Rehabilitation | UTMB Home
    1
    1. dnkennedy 17 Jun 2020
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    utmb.edu/cldr
  14. vsoch.github.io vsoch.github.io
    Data Containers
    1
    1. dnkennedy 15 Jun 2020
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    vsoch.github.io//2020/data-containers/
  15. nidm.scicrunch.io:7200 nidm.scicrunch.io:7200
    GraphDB Workbench
    1
    1. dnkennedy 11 Jun 2020
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    nidm.scicrunch.io:7200/
  16. May 2020
  17. www.pachyderm.com www.pachyderm.com
    Pachyderm
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    1. dnkennedy 11 May 2020
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    pachyderm.com/
  18. Feb 2020
  19. handbook.datalad.org handbook.datalad.org
    The Princeton Handbook for Reproducible Neuroimaging — The Princeton Handbook for Reporducible Neuroimaging
    1
    1. dnkennedy 13 Feb 2020
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    handbook.datalad.org/
  20. Nov 2019
  21. opensource.googleblog.com opensource.googleblog.com
    Improving Developer Experience for Writing Structured Data
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    1. dnkennedy 18 Nov 2019
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    opensource.googleblog.com/2019/11/improving-developer-experience-for.html
  22. Sep 2019
  23. handbook.datalad.org handbook.datalad.org
    Writing a reproducible paper — The DataLad Handbook
    1
    1. dnkennedy 14 Sep 2019
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    handbook.datalad.org/en/latest/usecases/reproducible-paper.html
  24. Jul 2019
  25. opensciencemooc.eu opensciencemooc.eu
    Open Science MOOC
    1
    1. dnkennedy 26 Jul 2019
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    opensciencemooc.eu/
  26. Feb 2019
  27. sibis.sri.com sibis.sri.com
    ABCD Challenge (MICCIA 2019)
    1
    1. dnkennedy 21 Feb 2019
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    sibis.sri.com/abcd-np-challenge/
  28. Jan 2019
  29. lossofconfidence.com lossofconfidence.com
    Loss-of-Confidence Project
    1
    1. dnkennedy 09 Jan 2019
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    lossofconfidence.com/
  30. Nov 2018
  31. www.narps.info www.narps.info
    #narps - Neuroimaging Analysis Replication and Prediction Study
    1
    1. dnkennedy 01 Nov 2018
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    narps.info/
  32. Sep 2018
  33. wholetale.org wholetale.org
    The Whole Tale
    1
    1. dnkennedy 24 Sep 2018
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    wholetale.org//
  34. Aug 2018
  35. braininstitute.ca braininstitute.ca
    Brain-CODE | Ontario Brain Institute
    1
    1. dnkennedy 07 Aug 2018
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    braininstitute.ca/research-data-sharing/brain-code
  36. Apr 2018
  37. data2paper.org data2paper.org
    Data2paper
    1
    1. dnkennedy 09 Apr 2018
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    data2paper.org/
  38. www.cell.com www.cell.com
    STAR Methods: Cell Press
    1
    1. dnkennedy 09 Apr 2018
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    cell.com/star-methods
  39. mdc.lagotto.io mdc.lagotto.io
    Making Data Count – Home page for the Data Level Metrics Project
    1
    1. dnkennedy 09 Apr 2018
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    mdc.lagotto.io/
  40. Mar 2018
  41. research-software.org research-software.org
    Research Software Citation: Cite and Make Citable
    1
    1. dnkennedy 07 Mar 2018
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    research-software.org/citation/
  42. Jan 2018
  43. www.nlm.nih.gov www.nlm.nih.gov
    NIH Data Sharing Repositories
    1
    1. dnkennedy 26 Jan 2018
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    nlm.nih.gov/NIHbmic/nih_data_sharing_repositories.html
  44. github.com github.com
    NDAR/data-access-notebook
    1
    1. dnkennedy 24 Jan 2018
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    github.com/NDAR/data-access-notebook
  45. openrefine.org openrefine.org
    OpenRefine
    1
    1. dnkennedy 19 Jan 2018
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    openrefine.org/
  46. neurodata.io neurodata.io
    Neurodata
    1
    1. dnkennedy 16 Jan 2018
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    neurodata.io/
  47. mindcontrol-hbn.herokuapp.com mindcontrol-hbn.herokuapp.com
    Mindcontrol
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    1. dnkennedy 16 Jan 2018
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    mindcontrol-hbn.herokuapp.com/
  48. timvanmourik.github.io timvanmourik.github.io
    Hi! I am a PORCUPINE
    1
    1. dnkennedy 16 Jan 2018
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    timvanmourik.github.io/Porcupine/
  49. Oct 2017
  50. elifesciences.org elifesciences.org
    Reproducible Document Stack – supporting the next-generation research article
    1
    1. dnkennedy 10 Oct 2017
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    elifesciences.org/labs/7dbeb390/reproducible-document-stack-supporting-the-next-generation-research-article
  51. Aug 2017
  52. fairsharing.org fairsharing.org
    FAIRsharing
    1
    1. dnkennedy 22 Aug 2017
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    fairsharing.org/
  53. Jun 2017
  54. jea.acm.org jea.acm.org
    ACM JEA
    1
    1. dnkennedy 04 Jun 2017
      RCR: Replicated Computational Results Initiaitve
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    jea.acm.org/rcr_initiative.cfm
  55. toms.acm.org toms.acm.org
    ACM TOMS
    1
    1. dnkennedy 04 Jun 2017
      Replicated Computational Results (RCR)
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    toms.acm.org/replicated-computational-results.cfm
  56. www.ieee.org www.ieee.org
    IEEE The Future of Research Curation and Research Reproducibility<!--[if gte mso 9]><xml> <o:OfficeDocumentSettings> <o:AllowPNG /> </o:OfficeDocumentSettings> </xml><![endif]--><!--[if gte mso 9]><xml> <w:WordDocument> <w:View>Normal</w:View> <w:Zoom>0</w:Zoom> <w:TrackMoves /> <w:TrackFormatting /> <w:PunctuationKerning /> <w:ValidateAgainstSchemas /> <w:SaveIfXMLInvalid>false</w:SaveIfXMLInvalid> <w:IgnoreMixedContent>false</w:IgnoreMixedContent> <w:AlwaysShowPlaceholderText>false</w:AlwaysShowPlaceholderText> <w:DoNotPromoteQF /> <w:LidThemeOther>EN-US</w:LidThemeOther> <w:LidThemeAsian>X-NONE</w:LidThemeAsian> <w:LidThemeComplexScript>X-NONE</w:LidThemeComplexScript> <w:Compatibility> <w:BreakWrappedTables /> <w:SnapToGridInCell /> <w:WrapTextWithPunct /> <w:UseAsianBreakRules /> <w:DontGrowAutofit /> <w:SplitPgBreakAndParaMark /> <w:EnableOpenTypeKerning /> <w:DontFlipMirrorIndents /> <w:OverrideTableStyleHps /> </w:Compatibility> <m:mathPr> <m:mathFont m:val=
    1
    1. dnkennedy 04 Jun 2017
      The Future of Research Curation and Research Reproducibility
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    ieee.org/publications_standards/publications/ieee_workshops/research_reproducibility.html
  57. www.software.ac.uk www.software.ac.uk
    The Software Sustainability Institute | Software Sustainability Institute
    1
    1. dnkennedy 02 Jun 2017
      The Software Sustainability Institute
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    software.ac.uk/software-sustainability-institute
  58. Apr 2017
  59. openmediascholarship.org openmediascholarship.org
    Open Media Scholarship | open access in media studies
    1
    1. dnkennedy 01 Apr 2017
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    openmediascholarship.org/
  60. Feb 2017
  61. github.com github.com
    systemslab/popper
    1
    1. dnkennedy 10 Feb 2017
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    github.com/systemslab/popper/wiki/Intro-to-Popper
  62. www.mcgill.ca www.mcgill.ca
    The Open MEG Archive (OMEGA) | McConnell Brain Imaging Centre - McGill University
    1
    1. dnkennedy 01 Feb 2017
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    mcgill.ca/bic/resources/omega
  63. Jan 2017
  64. ga4gh.org ga4gh.org
    ga4gh
    1
    1. dnkennedy 25 Jan 2017
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    ga4gh.org/
  65. dev.openanatomy.org dev.openanatomy.org
    The Open Anatomy Project
    1
    1. dnkennedy 11 Jan 2017
      ReproNim HAWG ReproNim:Resource INCF
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    dev.openanatomy.org/
  66. ohif.org ohif.org
    OHIF Website
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    1. dnkennedy 11 Jan 2017
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    ohif.org/
  67. clowder.ncsa.illinois.edu clowder.ncsa.illinois.edu
    Clowder
    1
    1. dnkennedy 10 Jan 2017
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    clowder.ncsa.illinois.edu/clowder/
  68. browndog.ncsa.illinois.edu browndog.ncsa.illinois.edu
    NCSA Brown Dog
    1
    1. dnkennedy 10 Jan 2017
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    browndog.ncsa.illinois.edu/
  69. Dec 2016
  70. github.com github.com
    boutiques/boutiques
    1
    1. dnkennedy 20 Dec 2016
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    github.com/boutiques/boutiques
  71. boutiques.github.io boutiques.github.io
    boutiques: A cross-platform application repository for data analysis platforms
    1
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    boutiques.github.io/
  72. www.frontiersin.org www.frontiersin.org
    Frontiers |
    1
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    frontiersin.org/10.3389/conf.fnins.2015.91.00012/event_abstract
  73. benchling.com benchling.com
    Benchling · Better tools, faster research
    1
    1. dnkennedy 07 Dec 2016
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    benchling.com/
  74. joss.theoj.org joss.theoj.org
    The Journal of Open Source Software
    1
    1. dnkennedy 02 Dec 2016
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    joss.theoj.org/
  75. Nov 2016
  76. github.com github.com
    recipy/recipy
    1
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    github.com/recipy/recipy
  77. repod.pon.edu.pl repod.pon.edu.pl
    Welcome - RepOD
    1
    1. dnkennedy 03 Nov 2016
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    repod.pon.edu.pl/
  78. Sep 2016
  79. camh-scwg.github.io camh-scwg.github.io
    Exploring data with R tutorial
    1
    1. dnkennedy 22 Sep 2016

      Cool R tricks, Thanks, Erin!

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    camh-scwg.github.io/compucool-oct-2016/workshops/explore_with_R.html
  80. neurohackweek.github.io neurohackweek.github.io
    Neurohackweek
    1
    1. dnkennedy 20 Sep 2016
      Summer school
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    neurohackweek.github.io/
  81. Aug 2016
  82. projectreporter.nih.gov projectreporter.nih.gov
    Project Information - NIH RePORTER - NIH Research Portfolio Online Reporting Tools Expenditures and Results
    1
    1. dnkennedy 19 Aug 2016

      Related to ReproNim TR&D2

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    projectreporter.nih.gov/project_description.cfm
  83. Jul 2016
  84. identifiers.org identifiers.org
    Identifiers.org < EMBL-EBI
    1
    1. dnkennedy 29 Jul 2016
      Identifiers.org Identifiers.org is a system providing resolvable persistent URIs used to identify data for the scientific community, with a current focus on the Life Sciences domain. The provision of a resolvable identifiers (URLs) fits well with the Semantic Web vision, and the Linked Data initiative.
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    identifiers.org/
  85. biosharing.org biosharing.org
    BioSharing
    1
    1. dnkennedy 29 Jul 2016
      A curated, searchable portal of inter-related data standards, databases, and policies in the life, environmental and biomedical sciences
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    biosharing.org/
  86. www.w3.org www.w3.org
    Dataset Descriptions: HCLS Community Profile
    1
    1. dnkennedy 29 Jul 2016
      Dataset Descriptions: HCLS Community Profile
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    w3.org/TR/hcls-dataset/
  87. www.nationaldataservice.org www.nationaldataservice.org
    The National Data Service
    1
    1. dnkennedy 27 Jul 2016
      The NationalDATA SERVICE
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    nationaldataservice.org/
  88. opendatabutton.org opendatabutton.org
    Open Data Button
    1
    1. dnkennedy 25 Jul 2016
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    opendatabutton.org/
  89. opennessinitiative.org opennessinitiative.org
    Peer Reviewers' Openness Initiative | Supporting the spread of open research practices
    1
    1. dnkennedy 25 Jul 2016
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    opennessinitiative.org/
  90. brainx.io brainx.io
    Global Brain Workshop
    1
    1. dnkennedy 25 Jul 2016
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    brainx.io/
  91. datamed.org datamed.org
    DataMed | bioCADDIE DDI
    1
    1. dnkennedy 06 Jul 2016
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    datamed.org/index.php
  92. docs.google.com docs.google.com
    Database resources for open science (15 Oct 2015)
    1
    1. dnkennedy 01 Jul 2016

      Spreadsheet of potential data resources for the Open Science Prize

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    docs.google.com/spreadsheets/d/14_oCSKXcDWlcc4UBjLEh2KFidYN7ZBfCMNbz2iXu-2M/edit
  93. Jun 2016
  94. med.stanford.edu med.stanford.edu
    CEDAR | Center for Expanded Data Annotation and Retrieval | Stanford Medicine
    1
    1. dnkennedy 30 Jun 2016
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    med.stanford.edu/cedar.html
  95. aws.amazon.com aws.amazon.com
    AWS Public Data Sets
    1
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    aws.amazon.com/datasets/
  96. github.com github.com
    MRN-Code/coinstac
    1
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    github.com/MRN-Code/coinstac
  97. cos.io cos.io
    COS | TOP Guidelines
    1
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    cos.io/top/
  98. github.com github.com
    nipy/heudiconv
    1
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    github.com/nipy/heudiconv
  99. open-brain-consent.readthedocs.org open-brain-consent.readthedocs.org
    Make open data sharing a no-brainer for ethics committees. — Open Brain Consent 0.0.2.dev documentation
    1
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    open-brain-consent.readthedocs.org/en/latest/
  100. www.openwebfoundation.org www.openwebfoundation.org
    Open Web Foundation
    1
    1. dnkennedy 24 Jun 2016
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    openwebfoundation.org/home
  101. contentmine.org contentmine.org
    ContentMine
    1
    1. dnkennedy 23 Jun 2016
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    contentmine.org/
  102. dumontierlab.stanford.edu dumontierlab.stanford.edu
    Dumontier Laboratory for Biomedical Knowledge Discovery
    1
    1. dnkennedy 12 Jun 2016
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    dumontierlab.stanford.edu/
  103. biocaddie.org biocaddie.org
    bioCADDIE | biomedical and healthCAre Data Discovery and Indexing Ecosystem
    1
    1. dnkennedy 07 Jun 2016
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    biocaddie.org/
  104. ckan.incf.org ckan.incf.org
    About - CKAN
    1
    1. dnkennedy 03 Jun 2016
      About

      INCF DataSpace Powered by CKAN

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    ckan.incf.org/about
  105. datascience.nih.gov datascience.nih.gov
    Commons Home Page | Data Science at NIH
    1
    1. dnkennedy 03 Jun 2016
      The Commons supports biomedical discovery by enabling sharing of digital objects
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    datascience.nih.gov/commons
  106. ckan.org ckan.org
    ckan - The open source data portal software
    1
    1. dnkennedy 03 Jun 2016
      The open source data portal software
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    ckan.org/