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3 Matching Annotations
  1. Sep 2018
  2. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Differential analyses for RNA-seq: transcript-level estimates improve gene-level inferences
    1
    1. rschulz 13 Sep 2018
      in Public
      Differential analyses for RNA-seq: transcript-level estimates improve gene-level inferences
      RNAseq TPM salmon transcript-length edgeR tximport R bioconductor
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    Tags

    • RNAseq
    • salmon
    • transcript-length
    • bioconductor
    • edgeR
    • tximport
    • R
    • TPM

    Annotators

    • rschulz

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC4712774/
  3. Feb 2018
  4. haroldpimentel.wordpress.com haroldpimentel.wordpress.com
    In RNA-Seq, 2 != 2: Between-sample normalization
    1
    1. rschulz 19 Feb 2018
      in Public
      In RNA-Seq, 2 != 2: Between-sample normalization
      RNAseq normalisation DESeq FPKM TPM
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    Tags

    • RNAseq
    • FPKM
    • normalisation
    • DESeq
    • TPM

    Annotators

    • rschulz

    URL

    haroldpimentel.wordpress.com/2014/12/08/in-rna-seq-2-2-between-sample-normalization/
  5. haroldpimentel.wordpress.com haroldpimentel.wordpress.com
    What the FPKM? A review of RNA-Seq expression units
    1
    1. rschulz 07 Feb 2018
      in Public
      A review of RNA-Seq expression units
      RNAseq TPM FPKM effectiveLength kallisto
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    Tags

    • RNAseq
    • FPKM
    • TPM
    • effectiveLength
    • kallisto

    Annotators

    • rschulz

    URL

    haroldpimentel.wordpress.com/2014/05/08/what-the-fpkm-a-review-rna-seq-expression-units/
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