PD/Pathogenic-10
CasePD/Pathogenic-10: 2 weeks diagnosis
HPOsFreeText: GAA activity 5.5 (nmol · h−1 · mg−1), Mean percentage of normal 7.8%
GenotypingMethod: Newborn Screening Panels
Variant1: NM_000152.4:c.271G>A (p.Asp91Asn)
ClinVar: 4020 https://www.ncbi.nlm.nih.gov/clinvar/variation/4020/
gnomAD: European (Non-Finnish) 0.03291, Overall 0.02049 http://gnomad.broadinstitute.org/variant/17-78078656-G-A
Variant2: NM_000152.4:c.2161G>T (p.Glu721Ter)
CAID: CA401370611 https://reg.clinicalgenome.org/redmine/projects/registry/genboree_registry/allele?hgvs=NM_000152.4%3Ac.2161G%3ET
gnomAD: Not in gnomAD
Variant3: NM_000152.4:c.2237G>T (p.Trp746Leu)
ClinVar: 284776 https://www.ncbi.nlm.nih.gov/clinvar/variation/284776/
gnomAD: European (Non-Finnish) 1.244e-4, Overall 7.798e-5 http://gnomad.broadinstitute.org/variant/17-78090814-G-T
CaseAddInfo: Patient has one pseudodeficency allele and one pathogenic allele, Nomenclature claims Variant 2 and 3 are in cis