- Nov 2022
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www.parcoursnumeriques-pum.ca www.parcoursnumeriques-pum.ca
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RDF DBPedia
Bien que DBPedia soit encore actif, le projet Wikidata a quelque peu remplacé ce projet
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www.wikidata.org www.wikidata.org
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ArtículoHDBIOcolores
Zotero
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URL
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www.canva.com www.canva.com
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EmmanuelFloresArellano
InstitucionalizacionBIocolores InformacionInstitucionalBiocolores
NOTAS
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Queremos explorar la distintas maneras en las que podemos estructurar información sobre la institucionalización de la biología del Color. Hasta el momento hemos usado Airtable y Wikidata. Cuál es la diferencia entre estas dos maneras de organizar la información? Cuáles son las ventajas y desventajas de cada una?
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Cómo organizamos la información sobre las siguientes fuentes: https://twitter.com/tibe_biopolis el congreso, los participantes y los productos https://twitter.com/i/lists/1345045033750130688 los investigadores, laboratorios y proyectos https://twitter.com/search?q=%23ColSci&src=hashtag_click&f=live mensajes
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Qué tipos de preguntas podemos responder
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Cuáles tipos de visualizaciones podemos realizar
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Para nacionalidad, género, origen, etc... en algunos casos podemos saber detalles en varios casos a partir de la información que publican en su perfil, esto nos podría tener una idea de la participación de minorías por ejemplo
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Que sigue en tu proyecto hacia dónde quieres avanzar? curación, procesamiento, visualización u otro?
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Qué pasará con la migración de académicos a Mastodon, alguien ya genero una cuenta ahí?
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www.youtube.com www.youtube.com
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SeminrioBIoinformacion
EmmanuelFloresArellano
InstitucionalizacionBiocolores
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orcid.org orcid.org
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identificador_autor,kit_software_biblioteca,kit/perfiles_autor,kit_orcid
https://www.wikidata.org/wiki/Property:P496
https://twitter.com/ORCID_Org @ORCID_Org
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dbtgr.hgc.jp dbtgr.hgc.jp
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DataBase
NARid: https://www.oxfordjournals.org/nar/database/summary/808
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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URL
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manteia.igbmc.fr manteia.igbmc.frManteia1
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Manteia
NARid: https://www.oxfordjournals.org/nar/database/summary/1712
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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URL
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microsporidiadb.org microsporidiadb.org
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Search for
NARid: https://www.oxfordjournals.org/nar/database/summary/1422
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Unicellular eukaryotes genome databases
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URL
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www.wormqtl-hd.org www.wormqtl-hd.org
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WormQTL
NARid: https://www.oxfordjournals.org/nar/database/summary/1714
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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genomecrispr.dkfz.de genomecrispr.dkfz.de
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GenomeCRISPR
NARid: https://www.oxfordjournals.org/nar/database/summary/1958
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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URL
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bioinformatics.psb.ugent.be bioinformatics.psb.ugent.be
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access point
NARid: https://www.oxfordjournals.org/nar/database/summary/1752
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Unicellular eukaryotes genome databases
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antismash-db.secondarymetabolites.org antismash-db.secondarymetabolites.org
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antiSMASH
NARid: https://www.oxfordjournals.org/nar/database/summary/1949
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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archive.har.mrc.ac.uk archive.har.mrc.ac.uk
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National Mouse Archive
NARid: https://www.oxfordjournals.org/nar/database/summary/1369
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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proteininformationresource.org proteininformationresource.org
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BioThesaurus
NARid: https://www.oxfordjournals.org/nar/database/summary/915
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Genome annotation terms, ontologies and nomenclature
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www.diark.org www.diark.org
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diArk
NARid: https://www.oxfordjournals.org/nar/database/summary/1172
NARCategory: Genomics Databases (non-vertebrate) Subcategory: General genomics databases
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www.biodiversitylibrary.org www.biodiversitylibrary.org
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https://github.com/lmichan/BioDBS
tw:@BioDivLibrary
https://twitter.com/BioDivLibrary
wd:https://www.wikidata.org/wiki/Q172266
https://github.com/lmichan/BioDBS
wd:https://www.wikidata.org/wiki/Q172266
tw:https://twitter.com/BioDivLibrary
biodiversidad
RRID:SCR_008969
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www.pseudomonas.com www.pseudomonas.com
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Pseudomonas Genome Database
NARid: https://www.oxfordjournals.org/nar/database/summary/733
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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Annotators
URL
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www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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HomoloGene
NARid: https://www.oxfordjournals.org/nar/database/summary/605
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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URL
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bacdive.dsmz.de bacdive.dsmz.de
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BacDive
NARid: https://www.oxfordjournals.org/nar/database/summary/1694
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Taxonomy and identification
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URL
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proconsortium.org proconsortium.org
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PRO
NARid: https://www.oxfordjournals.org/nar/database/summary/1327
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Genome annotation terms, ontologies and nomenclature
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www.mousephenotype.org www.mousephenotype.org
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IMPC data
NARid: https://www.oxfordjournals.org/nar/database/summary/1071 https://www.oxfordjournals.org/nar/database/summary/1711
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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Viral Genome Sequences
NARid: https://www.oxfordjournals.org/nar/database/summary/602 https://www.oxfordjournals.org/nar/database/summary/909
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Viral genome databases
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URL
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bioinfo-mml.sjtu.edu.cn bioinfo-mml.sjtu.edu.cnICEberg1
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ICEberg 2.0
NARid: https://www.oxfordjournals.org/nar/database/summary/1506
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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fungidb.org fungidb.orgFungiDB1
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Search for.
NARid: https://www.oxfordjournals.org/nar/database/summary/1509
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Fungal genome databases
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URL
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gowiki.tamu.edu gowiki.tamu.eduGONUTS1
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GONUTS
NARid: https://www.oxfordjournals.org/nar/database/summary/1561
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Genome annotation terms, ontologies and nomenclature
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prophecy.lundberg.gu.se prophecy.lundberg.gu.se
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PROPHECY Database
NARid: https://www.oxfordjournals.org/nar/database/summary/730
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Fungal genome databases
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H²DB
NARid: https://www.oxfordjournals.org/nar/database/summary/1637
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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hbvdb.lyon.inserm.fr hbvdb.lyon.inserm.fr
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The specialized Hepatitis B Virus
NARid: https://www.oxfordjournals.org/nar/database/summary/1618
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Viral genome databases
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URL
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BacWGSTdb
NARid: https://www.oxfordjournals.org/nar/database/summary/1867
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Taxonomy and identification
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URL
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eugenes.org eugenes.org
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euGenes
NARid: https://www.oxfordjournals.org/nar/database/summary/396
NARCategory: Human and other Vertebrate Genomes
Subcategory: Model organisms, comparative genomics
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URL
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chlamdb.ch chlamdb.ch
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Chlamydiae Database
NARid: https://www.oxfordjournals.org/nar/database/summary/2005
Category: Genomics Databases (non-vertebrate)
Subcategory: Prokaryotic genome databases
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URL
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www.effectors.org www.effectors.org
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EffectiveDB
NARid: https://www.oxfordjournals.org/nar/database/summary/1409
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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URL
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ontobee.org ontobee.orgOntobee1
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Ontobee
NARid: https://www.oxfordjournals.org/nar/database/summary/1938
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Genome annotation terms, ontologies and nomenclature
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Annotators
URL
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dictybase.org dictybase.org
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dictyBase
NARid: https://www.oxfordjournals.org/nar/database/summary/446
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Unicellular eukaryotes genome databases
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Annotators
URL
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LPSN
NARid: https://www.oxfordjournals.org/nar/database/summary/1697
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Taxonomy and identification
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URL
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www.bacterio.net www.bacterio.net
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LPSN
NARid: https://www.oxfordjournals.org/nar/database/summary/1697
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Taxonomy and identification
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URL
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hamap.expasy.org hamap.expasy.org
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HAMAP
NARid: https://www.oxfordjournals.org/nar/database/summary/1210
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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URL
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arxiv.org arxiv.org
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MinervaMaríaRomeroPérez
FernandoMoctezumaSoto
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www.ebi.ac.uk www.ebi.ac.uk
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cicblade.dep.usal.es:8080 cicblade.dep.usal.es:8080
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www.ebi.ac.uk www.ebi.ac.uk
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data.4dnucleome.org data.4dnucleome.org
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wan-bioinfo.shinyapps.io wan-bioinfo.shinyapps.ioGESS1
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https://github.com/lmichan/BioDBS
nar:https://academic.oup.com/nar/article/49/D1/D1/6059975
wd:https://www.wikidata.org/wiki/Q110584966
dc:subject: "COVID-19"
dc:date: 2021
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www.biomedical-web.com www.biomedical-web.com
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platform to discover potential drugs and targets of COVID-19 at whole transcriptome scale
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www.ebi.ac.uk www.ebi.ac.uk
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ega-archive.org ega-archive.org
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regprecise.lbl.gov regprecise.lbl.gov
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web.expasy.org web.expasy.org
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www.gabipd.org www.gabipd.org
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narid:https://www.oxfordjournals.org/nar/database/summary/672 narCategory:Plant databases Subcategory:General plant databases
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www.datascaraebaeoidea.net www.datascaraebaeoidea.net
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www.ebi.ac.uk www.ebi.ac.uk
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www.uniprot.org www.uniprot.orgUniProt1
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bioinfo.life.hust.edu.cn bioinfo.life.hust.edu.cn
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zfin.org zfin.org
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ardb.cbcb.umd.edu ardb.cbcb.umd.edu
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hpscreg.eu hpscreg.eu
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ngdc.cncb.ac.cn ngdc.cncb.ac.cn
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bio-annotation.cn bio-annotation.cn
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pedro.org.au pedro.org.au
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aopwiki.org aopwiki.orgAOP-Wiki1
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research.bioinformatics.udel.edu research.bioinformatics.udel.eduiPTMnet1
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www.metagenassist.ca www.metagenassist.ca
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web.expasy.org web.expasy.org
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www.antweb.org www.antweb.orgAntweb1
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www.disprot.org www.disprot.orgDisProt1
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narid:https://www.oxfordjournals.org/nar/database/summary/447
wd:https://www.wikidata.org/wiki/Q5281152
tw:https://twitter.com/DisProt_db/status/1505842904199319552
fuente de información:unicamente_lliteratura
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www.cuilab.cn www.cuilab.cn
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proteininformationresource.org proteininformationresource.org
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clingen.igib.res.in clingen.igib.res.in
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medlineplus.gov medlineplus.gov
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covid-19.ensembl.org covid-19.ensembl.org
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bionumbers.hms.harvard.edu bionumbers.hms.harvard.edu
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floresta.eead.csic.es floresta.eead.csic.es
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parasite.wormbase.org parasite.wormbase.org
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www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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https://github.com/lmichan/BioDBS
wd:https://www.wikidata.org/wiki/Q901755
narid:https://www.oxfordjournals.org/nar/database/summary/7
Type: Nucleotide Sequence Databases
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URL
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go.drugbank.com go.drugbank.com
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cov3d.ibbr.umd.edu cov3d.ibbr.umd.eduCoV3D1
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https://github.com/lmichan/BioDBS
wd:https://www.wikidata.org/wiki/Q110577226
narid:https://www.oxfordjournals.org/nar/database/summary/2224
dc_subject:"COVID-19"
dc_date:2021
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URL
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www.wikidata.org www.wikidata.org
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www.ebi.ac.uk www.ebi.ac.uk
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matrixdb.univ-lyon1.fr matrixdb.univ-lyon1.frMatrixDB1
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www.wildflower.org www.wildflower.org
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t-cov.hse.ru t-cov.hse.ru
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https://github.com/lmichan/BioDBS
nar:https://academic.oup.com/nar/article/50/D1/D1/6495890
wd:https://www.wikidata.org/wiki/Q110607528
NOTAS:
Falta agregar el artículo de la fuente a wikidata 10.1093/nar/gkab701
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URL
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covirus.cc covirus.cc
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https://github.com/lmichan/BioDBS
nar:https://academic.oup.com/nar/article/49/D1/D1/6059975
wd:https://www.wikidata.org/wiki/Q110584892
nar:Aparece en el artículo pero no lo encuentro en la base de datos
dc_subject: "COVID-19"
dc_date: 2021
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www.wikipathways.org www.wikipathways.org
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www.marinespecies.org www.marinespecies.org
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www.oxfordjournals.org www.oxfordjournals.org
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users.dcc.uchile.cl users.dcc.uchile.cl
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Claude Shannon
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docs.google.com docs.google.com
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MinervaMaríaRomeroPérez
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www.wikidata.org www.wikidata.org
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MinervaMaríaRomeroPérez
Esta es una nueva propiedad de wikidata que puede servirnos
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URL
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- Oct 2022
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www.youtube.com www.youtube.com
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github.com github.com
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Registro de la biología del color en Wikidata 1) vertebrados: felinos, colibríes, equinos y peces, 2) Pigmentos, 3) institucionalización, 4) color charts y días de interés https://github.com/lmichan/BiocoloresWikidata agosto 2021-Actualidad. Licencia Creative Commons (CC 4.0).
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comunidad.cienciaabierta.info comunidad.cienciaabierta.info
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Delia González Marín, Minerva María Romero Pérez, Yessica Galicia Pérez, Jacqueline Paredes Sánchez, Maripaz Mejía Elizalde y Layla Michán. 2022. Infografía Biología del color y Wikidata. Congreso Iberoamericano: Ciencia abierta, 23 y 24 de noviembre 2022. https://comunidad.cienciaabierta.info/t/ciencia-abierta-biologia-del-color-y-wikidata/177. Licencia Creative Commons (CC 4.0)
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DeliaGonzálezMarín
MinervaMaríaRomeroPérez
YessicaGaliciaPérez
JacquelineParedesSánchez
MaripazMejíaElizalde
LaylaMichánAguirre
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www.wikidata.org www.wikidata.org
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NubiaGetsemaníCasillasLópez
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www.wikidata.org www.wikidata.org
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Proyecto de Wikidata Bases de datos de biociencias
LaylaMichánAguirre
MinervaMaríaRomeroPérez
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docs.google.com docs.google.com
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MinervaMaríaRomeroPérez
🖍Mis notas
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Es enorme el trabajo que has realizado, felicidades‼️
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Está genial lo que están haciendo con los colibríes
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Hoy vimos cómo poner colores a organismos en Wikidata @wikidata para hacer mapas de conocimiento usando SPARQL: 🐯Felinos 🐠Peces 🐎Caballos 🦚Colibríes
SeminarioBioinformacion
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docs.google.com docs.google.com
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Michán, L. Wikidata e Investigación, Semana por la Despenalización del aborto. 2022. 29 de septiembre 2022, 16:00 a 17:00 hrs. https://www.facebook.com/EquidadFCUNAM/videos/1232180804230917/, https://docs.google.com/presentation/d/1paaZSn5zTaXLNgcgQfexaempPpCGFsgca0eC-2N7rHc/edit?usp=sharing
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www.wikidata.org www.wikidata.orgchestnut1
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WikidataBiocolores
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query.wikidata.org query.wikidata.org
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WikidataBiocolores
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Annotators
URL
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www.wikidata.org www.wikidata.org
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ColorColibries
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Annotators
URL
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www.wikidata.org www.wikidata.org
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WikidataBiocolores
Asurveyofcolorchartsforbiologicaldescriptions
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stylo.ecrituresnumeriques.ca stylo.ecrituresnumeriques.ca
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à savoir son wikidata.
couac
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subtiwiki.uni-goettingen.de subtiwiki.uni-goettingen.de
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Subti-Apps
NARid: https://www.oxfordjournals.org/nar/database/summary/110 https://www.oxfordjournals.org/nar/database/summary/1563
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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web.stanford.edu web.stanford.edu
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CauloBrowser
NARid: https://www.oxfordjournals.org/nar/database/summary/1865
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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www.inetbio.org www.inetbio.org
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MouseNetV2
NARid: https://www.oxfordjournals.org/nar/database/summary/1877
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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Annotators
URL
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superfly.crg.eu superfly.crg.eu
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SuperFly
NARid: https://www.oxfordjournals.org/nar/database/summary/1796
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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Annotators
URL
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pave.niaid.nih.gov pave.niaid.nih.govPaVE1
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the papillomavirus episteme
NARid: https://www.oxfordjournals.org/nar/database/summary/1619
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Viral genome databases
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Annotators
URL
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mage.genoscope.cns.fr mage.genoscope.cns.fr
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MicroScope
NARid: https://www.oxfordjournals.org/nar/database/summary/1666
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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www.wdcm.org www.wdcm.org
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WFCC
NARid: https://www.oxfordjournals.org/nar/database/summary/1954
NAR Category: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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Annotators
URL
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oikoarrays.biology.uiowa.edu oikoarrays.biology.uiowa.edu
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database
NARid: https://www.oxfordjournals.org/nar/database/summary/1639
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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pede.dna.affrc.go.jp pede.dna.affrc.go.jp
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database site
NARid: https://www.oxfordjournals.org/nar/database/summary/556
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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URL
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www.ridom.de www.ridom.de
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Ridom
NARid: https://www.oxfordjournals.org/nar/database/summary/299
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Taxonomy and identification
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URL
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hieranoidb.sbc.su.se hieranoidb.sbc.su.se
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HieranoiDB
NARid: https://www.oxfordjournals.org/nar/database/summary/1959
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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URL
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gold.jgi.doe.gov gold.jgi.doe.gov
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Genomes Online Database
NARid: https://www.oxfordjournals.org/nar/database/summary/2110
NARCategory: Genomics Databases (non-vertebrate) Subcategory: General genomics databases
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www.mg-rast.org www.mg-rast.orgMG-RAST1
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for programmatic access visit our API site
NARid: https://www.oxfordjournals.org/nar/database/summary/1860
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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URL
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www.ebi.ac.uk www.ebi.ac.uk
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Gene Ontology Annotation
NARid: https://www.oxfordjournals.org/nar/database/summary/389
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Genome annotation terms, ontologies and nomenclature
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URL
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viralzone.expasy.org viralzone.expasy.org
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VIRALZONE
NARid: https://www.oxfordjournals.org/nar/database/summary/1337
NAR Category: Genomics Databases (non-vertebrate) Subcategory: Viral genome databases
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Annotators
URL
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www.microbesonline.org www.microbesonline.org
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Add genomes
NARid: https://www.oxfordjournals.org/nar/database/summary/1358
NAR Category: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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URL
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www.phytopathdb.org www.phytopathdb.org
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PhytoPath
NARid: https://www.oxfordjournals.org/nar/database/summary/1868
NARCategory: Genomics Databases (non-vertebrate) Subcategory: General genomics databases
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Annotators
URL
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tolweb.org tolweb.org
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Tree of Life
NARid: https://www.oxfordjournals.org/nar/database/summary/301
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Taxonomy and identification
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www.mgc.ac.cn www.mgc.ac.cn
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virulence factor database
NARid: https://www.oxfordjournals.org/nar/database/summary/760
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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URL
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www.informatics.jax.org www.informatics.jax.org
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MGI
NARid: https://www.oxfordjournals.org/nar/database/summary/124
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Model organisms, comparative genomics
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URL
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identifiers.org identifiers.org
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Identifiers.org
NARid: https://www.oxfordjournals.org/nar/database/summary/1502
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Genome annotation terms, ontologies and nomenclature
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URL
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www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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Using BioProject
NARid: https://www.oxfordjournals.org/nar/database/summary/916
NARCategory: Genomics Databases (non-vertebrate) Subcategory: General genomics databases
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URL
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origin.tubic.org origin.tubic.orgDEG1
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Essential genes
NARid: https://www.oxfordjournals.org/nar/database/summary/445
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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bioinfo-mml.sjtu.edu.cn bioinfo-mml.sjtu.edu.cnSecReT41
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SecReT4
NARid: https://www.oxfordjournals.org/nar/database/summary/1576
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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www.iith.ac.in www.iith.ac.inEK3D1
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EK3D
NARid: https://www.oxfordjournals.org/nar/database/summary/1866
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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URL
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mycocosm.jgi.doe.gov mycocosm.jgi.doe.govMycocosm1
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Search for JGI Data
NARid: https://www.oxfordjournals.org/nar/database/summary/1704
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Fungal genome databases
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hgtree.snu.ac.kr hgtree.snu.ac.krHGTree1
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HGTree database
NARid: https://www.oxfordjournals.org/nar/database/summary/1862
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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URL
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www.wikidata.org www.wikidata.org
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lmichanCV⭐️Perfiles
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geneontology.org geneontology.org
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GO Consortium
NARid: https://www.oxfordjournals.org/nar/database/summary/487
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Genome annotation terms, ontologies and nomenclature
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Annotators
URL
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funsimmat.bioinf.mpi-inf.mpg.de funsimmat.bioinf.mpi-inf.mpg.de
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FunSimMat
NARid: https://www.oxfordjournals.org/nar/database/summary/1075
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Genome annotation terms, ontologies and nomenclature
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URL
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www.infrafrontier.eu www.infrafrontier.eu
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INFRAFRONTIER
NARid: https://www.oxfordjournals.org/nar/database/summary/1370
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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URL
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www.wikidata.org www.wikidata.org
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978-3-518-58742-3
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www.wikidata.org www.wikidata.org
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978-3-518-12735-3
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www.wikidata.org www.wikidata.org
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docs.google.com docs.google.com
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Lista de consultas SPARQL Sobre bases de datos
MinervaMaríaRomeroPérez
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docs.google.com docs.google.com
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Manual de curación usando Open Refine
MinervaMaríaRomeroPérez
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docs.google.com docs.google.com
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Manual de curación usando Quick Statements
MinervaMaríaRomeroPérez
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drive.google.com drive.google.com
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Seminario Bioinformación: El wikiproyecto bases de datos de biociencias
MinervaMaríaRomeroPérez
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cradle.toolforge.org cradle.toolforge.orgCradle1
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Formulario de wikidata para bases de datos de Biociencias
MinervaMaríaRomeroPérez
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Annotators
URL
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docs.google.com docs.google.com
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Manual Biodatabases Wikidata
MinervaMaríaRomeroPérez
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- Sep 2022
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github.com github.com
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http://www.mir2disease.org
NARid: https://www.oxfordjournals.org/nar/database/summary/1234
NARCategory: RNA sequence databases
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Annotators
URL
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www.wikidata.org www.wikidata.org
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Annotators
URL
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www.wikidata.org www.wikidata.org
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Annotators
URL
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rnacentral.org rnacentral.org
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RNAcentral
NARid: https://www.oxfordjournals.org/nar/database/summary/1766
NARCategory: RNA sequence databases
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URL
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bioinfo.life.hust.edu.cn bioinfo.life.hust.edu.cn
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LNCediting
NARid: https://www.oxfordjournals.org/nar/database/summary/1919
NARCategory: RNA sequence databases
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rssf.i2bc.paris-saclay.fr rssf.i2bc.paris-saclay.fr
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RNA Sequence, Structure and Function
NARid: https://www.oxfordjournals.org/nar/database/summary/1466
NARCategory: RNA sequence databases
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rfam.org rfam.org
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Rfam
NARid: https://www.oxfordjournals.org/nar/database/summary/382 https://www.oxfordjournals.org/nar/database/summary/51
NARCategory: RNA sequence databases
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Annotators
URL
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seve.ibmp.unistra.fr seve.ibmp.unistra.frPlantRNA1
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PlantRNA
NARid: https://www.oxfordjournals.org/nar/database/summary/1578
NARCategory: RNA sequence databases
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www.pathbase.net www.pathbase.netPathbase1
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Pathbase
NARid: https://www.oxfordjournals.org/nar/database/summary/554
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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URL
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cistrome.org cistrome.org
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Home
NARid: https://www.oxfordjournals.org/nar/database/summary/1957
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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Annotators
URL
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veupathdb.org veupathdb.org
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VEuPathDB
NARid: https://www.oxfordjournals.org/nar/database/summary/969
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Unicellular eukaryotes genome databases
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Annotators
URL
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ophid.utoronto.ca ophid.utoronto.ca
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Search Drug-Gene Interactions
NARid: https://www.oxfordjournals.org/nar/database/summary/1623
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Fungal genome databases
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Annotators
URL
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tisdb.human.cornell.edu tisdb.human.cornell.eduTIS_base1
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translation initiation sites
NARid: https://www.oxfordjournals.org/nar/database/summary/1713
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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Annotators
URL
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v3.ogee.info v3.ogee.infoOGEE1
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OGEE
NARid: https://www.oxfordjournals.org/nar/database/summary/1527
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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Annotators
URL
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img.jgi.doe.gov img.jgi.doe.gov
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IMG/M
NARid: https://www.wikidata.org/wiki/Q113986847
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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Annotators
URL
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img.jgi.doe.gov img.jgi.doe.gov
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Integrated Microbial Genomes
NARid: https://www.oxfordjournals.org/nar/database/summary/828
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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genolist.pasteur.fr genolist.pasteur.fr
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GenoList
NARid: https://www.oxfordjournals.org/nar/database/summary/1077
NARCategory: Genomics Databases (non-vertebrate) Subcategory: General genomics databases
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Annotators
URL
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nhprtr.org nhprtr.org
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NHPRTR
NARid: https://www.oxfordjournals.org/nar/database/summary/1638
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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URL
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services.cbib.u-bordeaux.fr services.cbib.u-bordeaux.frMG 3.01
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MolliGen
NARid: https://www.oxfordjournals.org/nar/database/summary/534
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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www.treefam.org www.treefam.org
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TreeFam
NARid: https://www.oxfordjournals.org/nar/database/summary/875
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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Annotators
URL
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www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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RefSeq
NARid: https://www.oxfordjournals.org/nar/database/summary/126
NARCategory: Genomics Databases (non-vertebrate)
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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Annotators
URL
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supfam.org supfam.org
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dcGO
NARid: https://www.oxfordjournals.org/nar/database/summary/1616
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Genome annotation terms, ontologies and nomenclature
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Annotators
URL
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www.yeastrc.org www.yeastrc.org
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Yeast Resource Center
NARid: https://www.oxfordjournals.org/nar/database/summary/763
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Fungal genome databases
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Annotators
URL
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www.inetbio.org www.inetbio.org
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YeastNet
NARid: https://www.oxfordjournals.org/nar/database/summary/1705
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Fungal genome databases
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Annotators
URL
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www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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Genome
NARid: https://www.oxfordjournals.org/nar/database/summary/458
NARCategory: Genomics Databases (non-vertebrate) Subcategory: General genomics databases
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Annotators
URL
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blog.dblp.org blog.dblp.org
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whenever you visit a publication details page in dblp, your browser will automatically load further available information from the OpenAlex API. Currently, two pieces of information will be loaded. The first one is a tag cloud of the contained concepts of a paper. OpenAlex uses more than 65k different concepts, extracted from WikiData and arranged hierarchically in a tree. This concept tree is a modified version that is based on the earlier classification work done for the original MAG, and its concepts are identified by an automated classifier that was trained on MAG data.
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iubmb.qmul.ac.uk iubmb.qmul.ac.uk
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Recommendations
NARid: https://www.oxfordjournals.org/nar/database/summary/513
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Genome annotation terms, ontologies and nomenclature
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Annotators
URL
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igrcid.ibms.sinica.edu.tw igrcid.ibms.sinica.edu.tw
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IGRhCellID
NARid: https://www.oxfordjournals.org/nar/database/summary/1416
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Genome annotation terms, ontologies and nomenclature
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gencolors.leibniz-fli.de gencolors.leibniz-fli.de
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GenColors
NARid: https://www.oxfordjournals.org/nar/database/summary/1668
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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Annotators
URL
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research.nhgri.nih.gov research.nhgri.nih.gov
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Zebrafish Insertion Collection
NARid: https://www.oxfordjournals.org/nar/database/summary/1640
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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Annotators
URL
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research.bioinformatics.udel.edu research.bioinformatics.udel.edu
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free resource
NARid: https://www.oxfordjournals.org/nar/database/summary/129
NARCategory: Genomics Databases (non-vertebrate)
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meta.microbesonline.org meta.microbesonline.org
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metaMicrobesOnline
NARid: https://www.oxfordjournals.org/nar/database/summary/1620
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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Annotators
URL
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tdrtargets.org tdrtargets.org
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TDR Targets
NARid: https://www.oxfordjournals.org/nar/database/summary/1178
NARategory: Genomics Databases (non-vertebrate) Subcategory: General genomics databases
Tags
Annotators
URL
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pbil.univ-lyon1.fr pbil.univ-lyon1.fr
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PhEVER
NARid: https://www.oxfordjournals.org/nar/database/summary/1432
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Viral genome databases
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www.genomicus.bio.ens.psl.eu www.genomicus.bio.ens.psl.eu
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Genomicus
NARid: https://www.oxfordjournals.org/nar/database/summary/121 https://www.oxfordjournals.org/nar/database/summary/1669
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Model organisms, comparative genomics
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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www.genome.wisc.edu www.genome.wisc.edu
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essential genes in E. coli
NARid: https://www.oxfordjournals.org/nar/database/summary/462
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
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hpo.jax.org hpo.jax.org
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The Human Phenotype Ontology
NARid: https://www.oxfordjournals.org/nar/database/summary/1692
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Genome annotation terms, ontologies and nomenclature
Tags
Annotators
URL
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www.wikidata.org www.wikidata.org
Tags
Annotators
URL
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www.treebase.org www.treebase.org
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TreeBASE
NARid: https://www.oxfordjournals.org/nar/database/summary/906
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Genome annotation terms, ontologies and nomenclature
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mgan.geni-act.org mgan.geni-act.orgMGAN1
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MGAN
NARid: https://www.oxfordjournals.org/nar/database/summary/1017
NARCategory: Genomics Databases (non-vertebrate) Subcategory: Prokaryotic genome databases
Tags
Annotators
URL
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Online Mendelian Inheritance in Animals
NARid: https://www.oxfordjournals.org/nar/database/summary/548
NARCategory: Human and other Vertebrate Genomes Subcategory: Model organisms, comparative genomics
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Annotators
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It should, at the very least, tag the tile as "done", and not expose it as a playable tile again.
that would be if decision was "yes" or "no", I guess.
Does the game provider know who is playing?
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key-value-pairs to pass to the Wikidata API
parece ser bastante libre
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yes=1,
cuando hay varias opciones "yes" (como en los juegos de juanman), cuál se elige con el shortcut?
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