1,108 Matching Annotations
  1. Aug 2021
  2. www.biorxiv.org www.biorxiv.org
    Tunable phenotypic variability through an autoregulatory alternative sigma factor circuit
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    1. EMBOpress 13 Aug 2021

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    biorxiv.org/content/10.1101/2020.06.18.158790v1
  3. www.biorxiv.org www.biorxiv.org
    TNF stimulation primarily modulates transcriptional burst size of NF-κB-regulated genes
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    1. EMBOpress 13 Aug 2021

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    biorxiv.org/content/10.1101/2020.11.16.384297v1
  4. www.biorxiv.org www.biorxiv.org
    Modeling Genetic Epileptic Encephalopathies using Brain Organoids
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    1. EMBOpress 11 Aug 2021

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    biorxiv.org/content/10.1101/2020.08.23.263236v1
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    Non-canonical proline-tyrosine interactions with multiple host proteins regulate Ebola virus infection
    1
    1. EMBOpress 10 Aug 2021

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    biorxiv.org/content/10.1101/2020.05.19.102954v1
  6. Jul 2021
  7. www.biorxiv.org www.biorxiv.org
    A polycomb-independent role of EZH2 in TGFβ1-damaged epithelium triggers a fibrotic cascade with mesenchymal cells
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    1. EMBOpress 29 Jul 2021

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    biorxiv.org/content/10.1101/2020.07.29.225300v1
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    Edem1 activity in the fat body regulates insulin signalling and metabolic homeostasis in Drosophila
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    1. EMBOpress 28 Jul 2021

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    biorxiv.org/lookup/doi/10.1101/671305
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    Precise transcriptional control of cellular quiescence by BRAVO/WOX5 complex in Arabidopsis roots
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    1. EMBOpress 28 Jul 2021

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    biorxiv.org/lookup/doi/10.1101/2020.07.15.203638
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    HMGB1 as a rheostat of chromatin topology and RNA homeostasis on the path to senescence
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    1. EMBOpress 28 Jul 2021

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    biorxiv.org/lookup/doi/10.1101/540146
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    A genome-scale yeast library with inducible expression of individual genes
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    1. EMBOpress 20 Jul 2021

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    biorxiv.org/content/10.1101/2020.12.30.424776v2
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    Diverse natural variants suppress mutations in hundreds of essential genes
    1
    1. EMBOpress 17 Jul 2021

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    biorxiv.org/content/10.1101/2020.11.24.395855v2
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    Behavioral fingerprints predict insecticide and anthelmintic mode of action
    1
    1. EMBOpress 17 Jul 2021

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    biorxiv.org/content/10.1101/2021.01.27.428391v1
  14. www.biorxiv.org www.biorxiv.org
    Nse5/6 inhibits the Smc5/6 ATPase to facilitate DNA substrate selection.
    1
    1. EMBOpress 17 Jul 2021

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    biorxiv.org/content/10.1101/2021.02.09.430422v1
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    JSTA: joint cell segmentation and cell type annotation for spatial transcriptomics
    1
    1. EMBOpress 17 Jul 2021

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    biorxiv.org/content/10.1101/2020.09.18.304147v1
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    Characterization of histone inheritance patterns in the Drosophila female germline
    1
    1. EMBOpress 17 Jul 2021

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    biorxiv.org/content/10.1101/2020.08.18.255455v1
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    Primary platinum resistance and immune exclusion in ovarian carcinomas with high expression of the homologous recombination mediator RAD51
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    1. EMBOpress 17 Jul 2021

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    biorxiv.org/content/10.1101/2020.06.09.137612v1
  18. www.biorxiv.org www.biorxiv.org
    http://biorxiv.org/cgi/content/short/2020.11.21.392639
    1
    1. EMBOpress 17 Jul 2021

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    biorxiv.org/content/10.1101/2020.11.21.392639v1
  19. www.biorxiv.org www.biorxiv.org
    Integrative profiling of early host chromatin accessibility responses in human neutrophils with sensitive pathogen detection.
    1
    1. EMBOpress 16 Jul 2021

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    biorxiv.org/content/10.1101/2020.04.28.066829v1
  20. www.biorxiv.org www.biorxiv.org
    A phosphoproteomic approach reveals that PKD3 controls phenylalanine and tyrosine metabolism
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    1. EMBOpress 16 Jul 2021

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    biorxiv.org/content/10.1101/2020.07.20.211474v1
  21. www.biorxiv.org www.biorxiv.org
    Stepwise transmigration cascade of T and B cells through the perivascular channel in lymph node high endothelial venules
    1
    1. EMBOpress 16 Jul 2021

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    biorxiv.org/content/10.1101/2020.12.20.423079v1
  22. www.biorxiv.org www.biorxiv.org
    Dynamic association of IκBα to chromatin is regulated by acetylation and cleavage of histone H4
    1
    1. EMBOpress 16 Jul 2021

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    biorxiv.org/content/10.1101/2021.02.15.431217v1
  23. www.biorxiv.org www.biorxiv.org
    Targeting the SHP2 phosphatase promotes vascular damage and inhibition of tumor growth
    1
    1. EMBOpress 16 Jul 2021

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    biorxiv.org/content/10.1101/2020.10.06.327882v1
  24. www.biorxiv.org www.biorxiv.org
    A highly conserved binding pocket on PP2A-B56 is required for shugoshin binding and cohesion protection
    1
    1. EMBOpress 16 Jul 2021

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    biorxiv.org/content/10.1101/2020.12.18.423432v1
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    Proteomics characterisation of the L929 cell supernatant and its role in BMDM differentiation
    1
    1. EMBOpress 14 Jul 2021

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    biorxiv.org/content/10.1101/2020.08.20.259515v2
  26. www.biorxiv.org www.biorxiv.org
    Fast but not furious: a streamlined selection method for genome edited cells
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    1. EMBOpress 14 Jul 2021

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    biorxiv.org/content/10.1101/2021.01.22.427783v1
  27. www.biorxiv.org www.biorxiv.org
    Dynamic closed states of a ligand-gated ion channel captured by cryo-EM and simulations
    1
    1. EMBOpress 14 Jul 2021

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    biorxiv.org/content/10.1101/2021.01.04.425171v1
  28. www.biorxiv.org www.biorxiv.org
    Microglia show differential transcriptomic response to Aβ peptide aggregates ex vivo and in vivo
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    1. EMBOpress 14 Jul 2021

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    biorxiv.org/content/10.1101/2021.03.02.433544v1
  29. www.biorxiv.org www.biorxiv.org
    PML-Dependent Memory of Type I Interferon Treatment Results in a Restricted Form of HSV Latency
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    1. EMBOpress 14 Jul 2021

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    biorxiv.org/content/10.1101/2021.02.03.429616v1
  30. www.biorxiv.org www.biorxiv.org
    Increased levels of the mitochondrial import factor Mia40 prevent the aggregation of polyQ proteins in the cytosol
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    1. EMBOpress 14 Jul 2021

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    biorxiv.org/content/10.1101/2021.02.02.429331v1
  31. www.biorxiv.org www.biorxiv.org
    Amphipathic Bax core dimer forms part of apoptotic pore wall in the mitochondrial membrane
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    1. EMBOpress 14 Jul 2021

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    biorxiv.org/content/10.1101/2020.12.18.423546v1
  32. www.biorxiv.org www.biorxiv.org
    http://biorxiv.org/cgi/content/short/2020.12.23.424169
    1
    1. EMBOpress 14 Jul 2021

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    biorxiv.org/content/10.1101/2020.12.23.424169v1
  33. www.biorxiv.org www.biorxiv.org
    Quantifying signal persistence in the T cell signaling network using an optically controllable antigen receptor
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    1. EMBOpress 14 Jul 2021

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    biorxiv.org/content/10.1101/2020.10.30.362194v1
  34. www.biorxiv.org www.biorxiv.org
    IL-13 deficiency exacerbates lung damage and impairs epithelial-derived type 2 molecules during nematode infection
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    1. EMBOpress 13 Jul 2021

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    biorxiv.org/content/10.1101/2020.10.14.337949v1
  35. www.biorxiv.org www.biorxiv.org
    Differential homeostatic regulation of glycinergic and GABAergic nanocolumns at mixed inhibitory synapses
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    1. EMBOpress 13 Jul 2021

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    biorxiv.org/content/10.1101/2020.11.23.372383v1
  36. www.biorxiv.org www.biorxiv.org
    Aurora Kinase A proximity interactome reveals centriolar satellites as regulators of its function during primary cilium biogenesis
    1
    1. EMBOpress 09 Jul 2021

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    biorxiv.org/content/10.1101/2020.11.05.370320v1
  37. www.biorxiv.org www.biorxiv.org
    A cryo-EM structure of metazoan TRAPPIII, the multisubunit complex that activates the GTPase Rab1
    1
    1. EMBOpress 09 Jul 2021

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    biorxiv.org/content/10.1101/2020.12.17.423307v1
  38. www.biorxiv.org www.biorxiv.org
    Human IFITM3 restricts Chikungunya virus and Mayaro virus infection and is susceptible to virus-mediated counteraction
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    1. EMBOpress 02 Jul 2021

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    biorxiv.org/content/10.1101/2020.09.11.292946v1
  39. www.biorxiv.org www.biorxiv.org
    Vaccinia virus hijacks ESCRT-mediated multivesicular body formation for virus egress
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    1. EMBOpress 01 Jul 2021

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    biorxiv.org/content/10.1101/2020.07.15.203935v1
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    A dynamic and spatially periodic micro-pattern of HES5 expression underlies the probability of neuronal differentiation in the mouse spinal cord
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    1. EMBOpress 01 Jul 2021

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    biorxiv.org/content/10.1101/2020.08.03.234369v2
  41. Jun 2021
  42. www.biorxiv.org www.biorxiv.org
    Aneuploid cells activate NF-κB to promote their immune clearance by NK cells
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    1. EMBOpress 30 Jun 2021

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    biorxiv.org/content/10.1101/2020.06.25.172239v1
  43. www.biorxiv.org www.biorxiv.org
    CyclinD1 controls development of cerebellar granule cell progenitors through phosphorylation and stabilization of ATOH1
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    1. EMBOpress 15 Jun 2021

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    biorxiv.org/content/10.1101/2020.03.27.010926v1
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    CDC50A dependent phosphatidylserine exposure induces inhibitory post-synapse elimination by microglia
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    1. EMBOpress 15 Jun 2021

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    biorxiv.org/content/10.1101/2020.04.25.060616v1
  45. www.biorxiv.org www.biorxiv.org
    Integrated requirement of non-specific and sequence-specific DNA binding in MYC-driven transcription
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    1. EMBOpress 10 Jun 2021

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    biorxiv.org/content/10.1101/2020.05.04.076190v2
  46. www.biorxiv.org www.biorxiv.org
    Sequence analysis allows functional annotation of tyrosine recombinases in prokaryotic genomes
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    1. EMBOpress 08 Jun 2021

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    biorxiv.org/content/10.1101/542381v1
  47. www.biorxiv.org www.biorxiv.org
    Subepidermal blisters are healed by wedge-shaped keratinocytes of hair follicle origin
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    1. EMBOpress 08 Jun 2021

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    biorxiv.org/content/10.1101/2020.04.08.032326v2
  48. www.biorxiv.org www.biorxiv.org
    Pancreatic Cancer Intrinsic PI3Kα Activity accelerates Metastasis and rewires Macrophage Component
    1
    1. EMBOpress 08 Jun 2021

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    biorxiv.org/content/10.1101/2020.09.23.307884v1
  49. May 2021
  50. www.biorxiv.org www.biorxiv.org
    http://biorxiv.org/cgi/content/short/2020.08.10.243220
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    1. EMBOpress 29 May 2021

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    biorxiv.org/content/10.1101/2020.08.10.243220v2
  51. www.biorxiv.org www.biorxiv.org
    Somatic transposition in the Drosophila intestine occurs in active chromatin and is associated with tumor suppressor gene inactivation
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    1. EMBOpress 26 May 2021

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    biorxiv.org/content/10.1101/2020.07.10.166629v1
  52. www.biorxiv.org www.biorxiv.org
    REPRESSION BY HDAC3 AND DAX1 MEDIATES LINEAGE RESTRICTION OF EMBRYONIC STEM CELLS
    1
    1. EMBOpress 20 May 2021

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    biorxiv.org/content/10.1101/2020.09.10.291013v1
  53. www.biorxiv.org www.biorxiv.org
    Gametic specialization of centromeric histone paralogs in Drosophila virilis
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    1. EMBOpress 19 May 2021

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    biorxiv.org/content/10.1101/530295v1
  54. www.biorxiv.org www.biorxiv.org
    On the Relation of Gene Essentiality to Intron Structure: A Computational and Deep Learning Approach
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    1. EMBOpress 19 May 2021

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    Spurious regulatory connections dictate the expression-fitness landscape of translation factors
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    NF45/NF90-mediated rDNA transcription provides a novel target for immunosuppressant development
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    Phosphoproteomics Reveals a Distinct Mode of Mec1/ATR Signaling in Response to DNA End Hyper-Resection
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    The genotype-phenotype landscape of an allosteric protein
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    The genotype-phenotype landscape of an allosteric protein
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    PTP-MEG2 regulates quantal size and fusion pore opening through two distinct structural bases and substrates
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    Different mutant RUNX1 oncoproteins program alternate haematopoietic differentiation trajectories
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    Membrane potential regulates Hedgehog signaling and compartment boundary maintenance in the Drosophila wing disc
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    Using a bistable animal opsin for switchable and scalable optogenetic inhibition of neurons
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    From Chemoproteomic-Detected Amino Acids to Genomic Coordinates: Insights into Precise Multi-omic Data Integration
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    Promoters adopt distinct dynamic manifestations depending on transcription factor context
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    Self-assembly of multi-component mitochondrial nucleoids via phase separation
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    Biofabricating murine and human myo-substitutes for rapid volumetric muscle loss restoration
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    TATA and paused promoters active in differentiated tissues have distinct expression characteristics
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  113. Feb 2021
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    Using single-plant -omics in the field to link maize genes to functions and phenotypes
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    A quantitative analysis of the interplay of environment, neighborhood and cell state in 3D spheroids
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    DOMINO: a novel network-based module detection algorithm with reduced rate offalse calls
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    Causal integration of multi-omics data with prior knowledge to generate mechanistic hypotheses
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    Harmonization and Annotation of Single-cell Transcriptomics data with Deep Generative Models
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    Phosphoproteomics identifies microglial Siglec-F inflammatory response during neurodegeneration
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    CIGAR-seq, a CRISPR/Cas-based method for unbiased screening of novel mRNA modification regulators
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    Dormancy as a spectrum measuring spore’s proximity to death and to replicative life
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    The transcriptome dynamics of single cells during the cell cycle
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    Insulin signaling mediates neurodegeneration in glioma
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    A FIJI Macro for quantifying pattern in extracellular matrix
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    Reduced RNA turnover as a driver of cellular senescence
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    Cyclin A2 localises in the cytoplasm at the S/G2 transition to activate Plk1
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    Htr6 and Sstr3 ciliary targeting relies on both IC3 loops and C-terminal tails
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    IMiDs induce FAM83F degradation via an interaction with CK1α to attenuate Wnt signalling
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    Helicobacter pylori accelerates KRAS-dependent gastric dysplasia
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    SCFCdc4 ubiquitin ligase regulates synaptonemal complex formation during meiosis
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    Fungal mycelia and bacterial thiamine establish a mutualistic growth mechanism
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    Implications for tetraspanin-enriched microdomain assembly based on structures of CD9 with EWI-F
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    Overlapping oriC and centromere-like functions in secondary genome replicons determine their maintenance independent of chromosome I in Deinococcus radiodurans
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    Short duration splice promoting compound enables a tunable mouse model of spinal muscular atrophy
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    The bacterial quorum sensing signal DSF hijacks Arabidopsis thaliana sterol biosynthesis to suppress plant innate immunity
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    Mps2 links Csm4 and Mps3 to form a telomere-associated LINC complex in budding yeast
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    A double role of the Gal80 N-terminus in activation of transcription by Gal4p
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    Altered hematopoietic system and self-tolerance in Bardet-Biedl Syndrome
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    CRYPTOCHROMES confer robustness, not rhythmicity, to circadian timekeeping
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    Selective cross-linking of coinciding protein assemblies by in-gel cross-linking mass-spectrometry
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    In-depth and 3-Dimensional Exploration of the Budding Yeast Phosphoproteome
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    Transient deSUMOylation of IRF2BP proteins controls early transcription in EGFR signaling
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    Epigenetic gene-expression links heart failure to memory impairment
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    Biogenic Amine Neurotransmitters Promote Eicosanoid Production And Protein Homeostasis
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    A multifaceted cellular damage repair and prevention pathway promotes high level tolerance to β-lactam antibiotics
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    Zonal human hepatocytes are differentially permissive to Plasmodium falciparum malaria parasites
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    Targeted attenuation of elevated histone marks at SNCA alleviates α-synuclein in Parkinson's disease
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    Histone methyltransferase DOT1L controls state-specific identity during B cell differentiation
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    Gradual centriole maturation associates with the mitotic surveillance pathway in mouse development
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    Nucleo-plastidic PAP8/pTAC6 couples chloroplast formation with photomorphogenesis
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    Actin filament oxidation by MICAL1 suppresses protections from cofilin-induced disassembly
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    Beclin-1-mediated activation of autophagy improves proximal and distal urea cycle disorders.
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    Tyrosine phosphorylation regulates hnRNPA2 granule protein partitioning & reduces neurodegeneration
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    MicroRNA-574 Regulates FAM210A Expression and Influences Pathological Cardiac Remodeling
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    Modulation of Yorkie activity by alternative splicing is required for developmental stability
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    Structural inventory of native ribosomal ABCE1-43S pre-initiation complexes
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    Translation is required for miRNA-dependent decay of endogenous transcripts.
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    The Mutational Landscape of the SCAN-B Real-World Primary Breast Cancer Transcriptome
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    The innate immune DNA sensor cGAS is a negative regulator of DNA repair hence promotes genome instability and cell death
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    Stage-specific transcriptomes and DNA methylomes indicate an early and transient loss of transposon control in Arabidopsis shoot stem cells
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