211 Matching Annotations
  1. Last 7 days
  2. docdrop.org docdrop.org
    Video: Biology beyond the genome | Denis Noble (DocDrop)
    2
    1. stopresetgo 18 May 2024
      four 00:08:25 major common misunderstandings that have infected our understanding of what it is to be a living system

      for - molecular biology - paradigm shift - living system - 4 common misunderstandings - book - Understanding Living Systems - 4 common misunderstandings

      4 common misunderstandings of living systems - 1. The central dogma of molecular biology - one way causation - Genes (DNA) to - proteins to - organism - 2. The Weismann Barrier - 3. DNA as self-replicator - 4. Separation of Replicator (DNA) and Vehicle (Living cell) are completely separate

      molecular biology - paradigm shift - Denis Noble living system - 4 common misunderstandings book - Understanding Living Systems - 4 common misunderstandings
    2. stopresetgo 18 May 2024
      biology Beyond The 00:00:19 genome

      for - book - Biology Beyond the Genome - author - scientist - biologist - Denis Noble - book - Understanding Living Systems

      Denis Noble book - Biology Beyond the Genome book - Understanding Living Systems
    Visit annotations in context

    Tags

    Annotators

    URL

    docdrop.org/video/bzXFSufDDn8/
  3. Feb 2024
  4. www.biorxiv.org www.biorxiv.org
    Canalisation and plasticity on the developmental manifold of Caenorhabditis elegans
    1
    1. EMBOpress 24 Feb 2024

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology biophysics
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2023.04.14.536891v2
  5. Dec 2023
  6. www.biorxiv.org www.biorxiv.org
    Paralog dispensability shapes homozygous deletion patterns in tumor genomes
    1
    1. EMBOpress 13 Dec 2023

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology cancer biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2022.06.20.496722v3
  7. www.biorxiv.org www.biorxiv.org
    Detecting Cell Contact-dependent Gene Expression from Spatial Transcriptomics Data
    1
    1. EMBOpress 12 Dec 2023

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology bioinformatics
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2022.02.16.480673v2
  8. www.biorxiv.org www.biorxiv.org
    Multi-omic network analysis identified betacellulin as a novel target of omega-3 fatty acid attenuation of western diet-induced nonalcoholic steatohepatitis
    1
    1. EMBOpress 12 Dec 2023

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress EMBO Molecular Medicine systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2022.10.03.510635v2
  9. Nov 2023
  10. www.biorxiv.org www.biorxiv.org
    Dimensionality reduction methods for extracting functional networks from large-scale CRISPR screens
    1
    1. EMBOpress 21 Nov 2023

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology bioinformatics
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2023.02.22.529573v2
  11. Sep 2023
  12. www.biorxiv.org www.biorxiv.org
    Predictability of the community-function landscape in wine yeast ecosystems
    1
    1. EMBOpress 02 Sep 2023

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology microbiology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2022.12.15.520418v1
  13. www.biorxiv.org www.biorxiv.org
    Robust dimethyl-based multiplex-DIA workflow doubles single-cell proteome depth via a reference channel
    1
    1. EMBOpress 01 Sep 2023

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2022.12.02.518917v1
  14. Aug 2023
  15. www.biorxiv.org www.biorxiv.org
    A metabolic map of the DNA damage response identifies PRDX1 in nuclear ROS scavenging and aspartate synthesis
    1
    1. EMBOpress 30 Aug 2023

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology molecular biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2022.08.01.500855v1
  16. www.biorxiv.org www.biorxiv.org
    Principles for Systematic Optimization of an Orthogonal Translation System with Enhanced Biological Tolerance
    1
    1. EMBOpress 04 Aug 2023

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology synthetic biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2021.05.20.444985v1
  17. www.biorxiv.org www.biorxiv.org
    Consistency across multi-omics layers in a drug-perturbed gut microbial community
    1
    1. EMBOpress 02 Aug 2023

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology microbiology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2023.01.03.519475v1
  18. Jul 2023
  19. www.biorxiv.org www.biorxiv.org
    Antibody reliability influences observed mRNA-protein correlations in tumour samples
    1
    1. EMBOpress 13 Jul 2023

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Life Science Alliance systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2022.12.23.521733v1
  20. www.biorxiv.org www.biorxiv.org
    N-terminal proteoforms may engage in different protein complexes
    1
    1. EMBOpress 13 Jul 2023

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Life Science Alliance systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2023.01.17.524352v2
  21. www.biorxiv.org www.biorxiv.org
    A tissue-aware machine learning framework enhances the mechanistic understanding and genetic diagnosis of Mendelian and rare diseases
    1
    1. EMBOpress 07 Jul 2023

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology genetics
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2021.02.16.430825v1
  22. Jun 2023
  23. www.biorxiv.org www.biorxiv.org
    Missense variant interaction scanning reveals a critical role of the FERM-F3 domain for tumor suppressor protein NF2 conformation and function
    1
    1. EMBOpress 28 Jun 2023

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Life Science Alliance systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2022.12.11.519953v2
  24. www.biorxiv.org www.biorxiv.org
    Updated benchmarking of variant effect predictors using deep mutational scanning
    1
    1. EMBOpress 27 Jun 2023

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology bioinformatics
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2022.11.19.517196v1
  25. www.biorxiv.org www.biorxiv.org
    A case of mistaken identity: structurally similar ligand inhibits Thymidylate Kinase causing reversible filamentation of E. coli
    1
    1. EMBOpress 10 Jun 2023

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology microbiology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/738823v4
  26. www.biorxiv.org www.biorxiv.org
    Highly multiplexed quantitative phosphosite assay for biology and preclinical studies
    1
    1. EMBOpress 10 Jun 2023

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology cancer biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.12.08.415281v1
  27. www.biorxiv.org www.biorxiv.org
    Systems-level transcriptional regulation of Caenorhabditis elegans metabolism
    1
    1. EMBOpress 02 Jun 2023

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2022.11.08.515576v1
  28. May 2023
  29. www.biorxiv.org www.biorxiv.org
    A stimulus-contingent positive feedback loop enables IFN-β dose-dependent activation of pro-inflammatory genes
    1
    1. EMBOpress 24 May 2023

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology immunology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/lookup/doi/10.1101/2022.08.11.503561
  30. www.biorxiv.org www.biorxiv.org
    Automated assembly of molecular mechanisms at scale from text mining and curated databases
    1
    1. EMBOpress 24 May 2023

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/lookup/doi/10.1101/2022.08.30.505688
  31. www.biorxiv.org www.biorxiv.org
    Transcription factor expression is the main determinant of variability in gene co-activity
    1
    1. EMBOpress 24 May 2023

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology bioinformatics
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/lookup/doi/10.1101/2022.10.11.511770
  32. www.biorxiv.org www.biorxiv.org
    Mapping single-cell responses to population-level dynamics during antibiotic treatment
    1
    1. EMBOpress 24 May 2023

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology microbiology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/lookup/doi/10.1101/2022.11.18.517151
  33. Apr 2023
  34. www.biorxiv.org www.biorxiv.org
    Combined measurements of proteome and cell turnover reveal the influences of tissue context and pathological aging on protein and organelle lifetimes
    1
    1. EMBOpress 20 Apr 2023

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2022.04.24.488979v3
  35. www.biorxiv.org www.biorxiv.org
    Analysis of context-specific KRAS-effectors (sub)complexes in Caco-2 cells
    1
    1. EMBOpress 11 Apr 2023

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Life Science Alliance systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2022.08.15.503960v1
  36. Mar 2023
  37. www.biorxiv.org www.biorxiv.org
    A spatial model of the plant circadian clock reveals design principles for coordinated timing under noisy environments
    1
    1. EMBOpress 15 Mar 2023

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology plant biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.09.13.294785v2
  38. www.biorxiv.org www.biorxiv.org
    Protein Complexes in Bacillus subtilis by AI-assisted structural proteomics
    1
    1. EMBOpress 09 Mar 2023

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology molecular biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2022.07.26.501605v3
  39. Feb 2023
  40. www.biorxiv.org www.biorxiv.org
    Mechanistic model of MAPK signaling reveals how allostery and rewiring contribute to drug resistance
    1
    1. EMBOpress 17 Feb 2023

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2022.02.17.480899v1
  41. www.biorxiv.org www.biorxiv.org
    Constricted migration contributes to persistent 3D genome structure changes associated with an invasive phenotype in melanoma cells
    1
    1. EMBOpress 14 Feb 2023

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress EMBO reports systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/856583v3
  42. www.biorxiv.org www.biorxiv.org
    Evolution of genome fragility enables microbial division of labor
    1
    1. EMBOpress 14 Feb 2023

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology evolutionary biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2021.06.04.447040v5
  43. Jan 2023
  44. www.biorxiv.org www.biorxiv.org
    A toolbox for systematic discovery of stable and transient protein interactors in baker's yeast
    1
    1. EMBOpress 31 Jan 2023

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology molecular biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2022.04.27.489741v1
  45. www.biorxiv.org www.biorxiv.org
    Pan-Cancer landscape of protein activities identifies drivers of signalling dysregulation and patient survival
    1
    1. EMBOpress 28 Jan 2023

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology cancer biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2021.06.09.447741v1
  46. www.biorxiv.org www.biorxiv.org
    Adaptation of bacterial proteome reveals a key role of the cell envelope in starvation survival
    1
    1. EMBOpress 24 Jan 2023

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2022.05.18.492425v2
  47. Dec 2022
  48. www.biorxiv.org www.biorxiv.org
    Epithelial-mesenchymal transition is the main driver of intrinsic metabolism in cancer cell lines
    1
    1. EMBOpress 01 Dec 2022

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2021.11.02.466992v1
  49. Nov 2022
  50. www.biorxiv.org www.biorxiv.org
    Heterogeneity of the Cancer Cell Line Metabolic Landscape
    1
    1. EMBOpress 21 Nov 2022

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology cancer biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2021.08.19.456093v1
  51. www.biorxiv.org www.biorxiv.org
    The molecular architecture of cell cycle arrest
    1
    1. EMBOpress 21 Nov 2022

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology cell biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2022.04.27.489684v1
  52. www.biorxiv.org www.biorxiv.org
    Systematic multi-level analysis of an organelle proteome reveals new peroxisomal functions
    1
    1. EMBOpress 21 Nov 2022

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology cell biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2021.12.08.471723v2
  53. www.biorxiv.org www.biorxiv.org
    Growth-mediated negative feedback shapes quantitative antibiotic response
    1
    1. EMBOpress 21 Nov 2022

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology microbiology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.12.28.424579v2
  54. www.biorxiv.org www.biorxiv.org
    Changes in chromatin accessibility are not concordant with transcriptional changes for single-factor perturbations
    1
    1. EMBOpress 21 Nov 2022

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology bioinformatics
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2022.02.03.478981v1
  55. www.biorxiv.org www.biorxiv.org
    Vesalius: Tissue anatomy from spatial transcriptomic data.
    1
    1. EMBOpress 21 Nov 2022

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology genomics
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2021.08.13.456235v3
  56. www.biorxiv.org www.biorxiv.org
    CellRegMap: A statistical framework for mapping context-specific regulatory variants using scRNA-seq
    1
    1. EMBOpress 21 Nov 2022

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology bioinformatics
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2021.09.01.458524v1
  57. www.biorxiv.org www.biorxiv.org
    Quantifying the phenotypic information in mRNA abundance
    1
    1. EMBOpress 21 Nov 2022

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2022.02.23.481668v1
  58. www.biorxiv.org www.biorxiv.org
    Species richness determines C. difficile invasion outcome in synthetic human gut communities
    1
    1. EMBOpress 21 Nov 2022

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2021.03.23.436677v1
  59. www.biorxiv.org www.biorxiv.org
    Optogenetic actuator/biosensor circuits for large-scale interrogation of ERK dynamics identify sources of MAPK signaling robustness.
    1
    1. EMBOpress 21 Nov 2022

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2021.07.27.453955v2
  60. www.biorxiv.org www.biorxiv.org
    Proteome-scale amino-acid resolution footprinting of protein-binding sites in the intrinsically disordered regions of the human proteome
    1
    1. EMBOpress 21 Nov 2022

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology biochemistry
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2021.04.13.439572v1
  61. www.biorxiv.org www.biorxiv.org
    Growth-dependent heterogeneity in the DNA damage response in Escherichia coli
    1
    1. EMBOpress 21 Nov 2022

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology cell biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2021.05.06.442821v2
  62. www.biorxiv.org www.biorxiv.org
    Dynamic human liver proteome atlas reveals functional insights into disease pathways
    1
    1. EMBOpress 21 Nov 2022

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2022.01.28.478194v1
  63. www.biorxiv.org www.biorxiv.org
    Reproducibility in systems biology modelling
    1
    1. EMBOpress 21 Nov 2022

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.08.07.239855v1
  64. May 2022
  65. www.biorxiv.org www.biorxiv.org
    Diauxic lags explain unexpected coexistence in multi-resource environments
    1
    1. EMBOpress 27 May 2022

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology ecology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2021.08.09.455603v2
  66. www.biorxiv.org www.biorxiv.org
    Differential impact of TNFRSF co-stimulation on CD8+ T cell cytokine production by feedback control of surface receptor expression
    1
    1. EMBOpress 07 May 2022

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology immunology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2021.07.02.450833v1
  67. www.biorxiv.org www.biorxiv.org
    Single Cell Variability of CRISPR-Cas Interference and Adaptation
    1
    1. EMBOpress 04 May 2022

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology microbiology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2021.07.21.453200v1
  68. Apr 2022
  69. www.biorxiv.org www.biorxiv.org
    Unique features of transcription termination and initiation at closely spaced tandem human genes
    1
    1. EMBOpress 23 Apr 2022

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology genomics
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2021.09.10.459726v1
  70. www.biorxiv.org www.biorxiv.org
    Physical and functional interactome atlas of human receptor tyrosine kinases
    1
    1. EMBOpress 22 Apr 2022

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress EMBO reports systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2021.09.17.460748v1
  71. www.biorxiv.org www.biorxiv.org
    Conserved exchange of paralog proteins during neuronal differentiation
    1
    1. EMBOpress 08 Apr 2022

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Life Science Alliance systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2021.07.22.453347v1
  72. Mar 2022
  73. www.biorxiv.org www.biorxiv.org
    GROWTH-RATE DEPENDENT AND NUTRIENT-SPECIFIC GENE EXPRESSION RESOURCE ALLOCATION IN FISSION YEAST
    1
    1. EMBOpress 22 Mar 2022

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Life Science Alliance systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2021.03.16.435638v1
  74. www.biorxiv.org www.biorxiv.org
    Ultra-high sensitivity mass spectrometry quantifies single-cell proteome changes upon perturbation
    1
    1. EMBOpress 22 Mar 2022

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.12.22.423933v2
  75. www.biorxiv.org www.biorxiv.org
    A human kinase yeast array for the identification of kinases modulating phosphorylation-dependent protein-protein interactions
    1
    1. EMBOpress 22 Mar 2022

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2021.11.18.469002v1
  76. www.biorxiv.org www.biorxiv.org
    https://biorxiv.org/cgi/content/10.1101/2021.09.01.458647
    1
    1. EMBOpress 09 Mar 2022

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology genomics
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2021.09.01.458647v1
  77. Feb 2022
  78. www.biorxiv.org www.biorxiv.org
    Structured decomposition improves systems serology prediction and interpretation
    1
    1. EMBOpress 19 Feb 2022

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology immunology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2021.01.03.425138v2
  79. www.biorxiv.org www.biorxiv.org
    Major functional bias for mitochondrial complexes in genome-wide CRISPR screens
    1
    1. EMBOpress 19 Feb 2022

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.08.31.273730v1
  80. Jan 2022
  81. www.biorxiv.org www.biorxiv.org
    Trade-offs in adaptation to glycolysis and gluconeogenesis result in a preferential flux direction in central metabolism
    1
    1. EMBOpress 21 Jan 2022

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2021.05.07.443112v3
  82. Dec 2021
  83. www.biorxiv.org www.biorxiv.org
    Modeling population size independent tissue epigenomes by ChIL-seq with single-thin sections
    1
    1. EMBOpress 16 Dec 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology molecular biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.12.18.423434v1
  84. www.biorxiv.org www.biorxiv.org
    A Genome-Scale TF-DNA Interaction Network of Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
    1
    1. EMBOpress 16 Dec 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2021.05.13.443927v1
  85. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    https://biorxiv.org/cgi/content/10.1101/2021.01.27.428543
    1
    1. EMBOpress 01 Dec 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC7852273/
  86. Nov 2021
  87. www.biorxiv.org www.biorxiv.org
    Cell-to-cell and type-to-type heterogeneity of signaling networks: Insights from the crowd
    1
    1. EMBOpress 30 Nov 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology bioinformatics
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2021.03.23.436603v2
  88. Oct 2021
  89. www.biorxiv.org www.biorxiv.org
    Exploring amino acid functions in a deep mutational landscape
    1
    1. EMBOpress 30 Oct 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/lookup/doi/10.1101/2020.05.26.116756
  90. Sep 2021
  91. www.biorxiv.org www.biorxiv.org
    Evaluating the Simple Arrhenius Equation for the Temperature Dependence of Complex Developmental Processes
    1
    1. EMBOpress 30 Sep 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.07.17.208777v1
  92. Aug 2021
  93. www.biorxiv.org www.biorxiv.org
    Single-cell transcriptomics reveals immune response of intestinal cell types to viral infection
    1
    1. EMBOpress 13 Aug 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.08.19.255893v1
  94. www.biorxiv.org www.biorxiv.org
    Identification of Covalent Modifications Regulating Immune Signaling Complex Composition and Phenotype
    1
    1. EMBOpress 13 Aug 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.11.16.384750v1
  95. www.biorxiv.org www.biorxiv.org
    Tunable phenotypic variability through an autoregulatory alternative sigma factor circuit
    1
    1. EMBOpress 13 Aug 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.06.18.158790v1
  96. www.biorxiv.org www.biorxiv.org
    TNF stimulation primarily modulates transcriptional burst size of NF-κB-regulated genes
    1
    1. EMBOpress 13 Aug 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.11.16.384297v1
  97. Jul 2021
  98. www.biorxiv.org www.biorxiv.org
    Precise transcriptional control of cellular quiescence by BRAVO/WOX5 complex in Arabidopsis roots
    1
    1. EMBOpress 28 Jul 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology plant biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/lookup/doi/10.1101/2020.07.15.203638
  99. www.biorxiv.org www.biorxiv.org
    HMGB1 as a rheostat of chromatin topology and RNA homeostasis on the path to senescence
    1
    1. EMBOpress 28 Jul 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology genomics
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/lookup/doi/10.1101/540146
  100. www.biorxiv.org www.biorxiv.org
    A genome-scale yeast library with inducible expression of individual genes
    1
    1. EMBOpress 20 Jul 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology synthetic biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.12.30.424776v2
  101. www.biorxiv.org www.biorxiv.org
    Diverse natural variants suppress mutations in hundreds of essential genes
    1
    1. EMBOpress 17 Jul 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology genetics
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.11.24.395855v2
  102. www.biorxiv.org www.biorxiv.org
    Behavioral fingerprints predict insecticide and anthelmintic mode of action
    1
    1. EMBOpress 17 Jul 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2021.01.27.428391v1
  103. www.biorxiv.org www.biorxiv.org
    JSTA: joint cell segmentation and cell type annotation for spatial transcriptomics
    1
    1. EMBOpress 17 Jul 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.09.18.304147v1
  104. www.biorxiv.org www.biorxiv.org
    Quantifying signal persistence in the T cell signaling network using an optically controllable antigen receptor
    1
    1. EMBOpress 14 Jul 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology biochemistry
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.10.30.362194v1
  105. www.biorxiv.org www.biorxiv.org
    A dynamic and spatially periodic micro-pattern of HES5 expression underlies the probability of neuronal differentiation in the mouse spinal cord
    1
    1. EMBOpress 01 Jul 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology developmental biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.08.03.234369v2
  106. Jun 2021
  107. www.biorxiv.org www.biorxiv.org
    Sequence analysis allows functional annotation of tyrosine recombinases in prokaryotic genomes
    1
    1. EMBOpress 08 Jun 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology evolutionary biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/542381v1
  108. May 2021
  109. www.biorxiv.org www.biorxiv.org
    Spurious regulatory connections dictate the expression-fitness landscape of translation factors
    1
    1. EMBOpress 19 May 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology biophysics
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.11.27.400200v1
  110. www.biorxiv.org www.biorxiv.org
    hu.MAP 2.0: Integration of over 15,000 proteomic experiments builds a global compendium of human multiprotein assemblies
    1
    1. EMBOpress 19 May 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.09.15.298216v1
  111. www.biorxiv.org www.biorxiv.org
    http://biorxiv.org/cgi/content/short/2020.10.21.348854
    1
    1. EMBOpress 19 May 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology immunology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.10.21.348854v1
  112. www.biorxiv.org www.biorxiv.org
    Multidimensional Chromatin Regulation of Cell Lineage Differentiation in a Metazoan Embryo
    1
    1. EMBOpress 06 May 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology developmental biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.05.18.101584v1
  113. www.biorxiv.org www.biorxiv.org
    CODEX, a neural network approach to explore signaling dynamics landscapes
    1
    1. EMBOpress 05 May 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology cell biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/lookup/doi/10.1101/2020.08.05.237842
  114. www.biorxiv.org www.biorxiv.org
    Proteome constraints reveal targets for improving microbial fitness in nutrient-rich environments
    1
    1. EMBOpress 04 May 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.10.15.340554v1
  115. Apr 2021
  116. www.biorxiv.org www.biorxiv.org
    CASB: A concanavalin A-based sample barcoding strategy for single-cell sequencing
    1
    1. EMBOpress 24 Apr 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology genomics
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.10.15.340844v1
  117. www.biorxiv.org www.biorxiv.org
    Urinary proteome profiling for stratifying patients with familial Parkinsons disease
    1
    1. EMBOpress 07 Apr 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress EMBO Molecular Medicine systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.08.09.243584v1
  118. www.biorxiv.org www.biorxiv.org
    Integrated intra- and intercellular signaling knowledge for multicelullar omics analysis
    1
    1. EMBOpress 05 Apr 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.08.03.221242v2
  119. www.biorxiv.org www.biorxiv.org
    Identifying Modules of Cooperating Cancer Drivers
    1
    1. EMBOpress 05 Apr 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology cancer biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.06.29.168229v1
  120. www.biorxiv.org www.biorxiv.org
    The genotype-phenotype landscape of an allosteric protein
    1
    1. EMBOpress 05 Apr 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology synthetic biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.07.10.197574v1
  121. www.biorxiv.org www.biorxiv.org
    The genotype-phenotype landscape of an allosteric protein
    1
    1. EMBOpress 05 Apr 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology biophysics
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.09.30.320812v1
  122. www.biorxiv.org www.biorxiv.org
    Multi-modal meta-analysis of cancer cell line omics profiles identifies ECHDC1 as a novel breast tumor suppressor
    1
    1. EMBOpress 02 Apr 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology cancer biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.01.31.929372v1
  123. www.biorxiv.org www.biorxiv.org
    The circadian oscillator analysed at the single-transcript level
    1
    1. EMBOpress 02 Apr 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.08.26.268201v1
  124. www.biorxiv.org www.biorxiv.org
    From Chemoproteomic-Detected Amino Acids to Genomic Coordinates: Insights into Precise Multi-omic Data Integration
    1
    1. EMBOpress 02 Apr 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.07.03.186007v2
  125. www.biorxiv.org www.biorxiv.org
    Promoters adopt distinct dynamic manifestations depending on transcription factor context
    1
    1. EMBOpress 02 Apr 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/650762v2
  126. www.biorxiv.org www.biorxiv.org
    TATA and paused promoters active in differentiated tissues have distinct expression characteristics
    1
    1. EMBOpress 02 Apr 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology genomics
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.07.15.196493v1
  127. Feb 2021
  128. www.biorxiv.org www.biorxiv.org
    Using single-plant -omics in the field to link maize genes to functions and phenotypes
    1
    1. EMBOpress 25 Feb 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.04.06.027300v1
  129. www.biorxiv.org www.biorxiv.org
    A quantitative analysis of the interplay of environment, neighborhood and cell state in 3D spheroids
    1
    1. EMBOpress 25 Feb 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.07.24.219659v1
  130. www.biorxiv.org www.biorxiv.org
    DOMINO: a novel network-based module detection algorithm with reduced rate offalse calls
    1
    1. EMBOpress 25 Feb 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology bioinformatics
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.03.10.984963v4
  131. www.biorxiv.org www.biorxiv.org
    Causal integration of multi-omics data with prior knowledge to generate mechanistic hypotheses
    1
    1. EMBOpress 25 Feb 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology bioinformatics
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.04.23.057893v1
  132. www.biorxiv.org www.biorxiv.org
    Harmonization and Annotation of Single-cell Transcriptomics data with Deep Generative Models
    1
    1. EMBOpress 25 Feb 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology bioinformatics
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/532895v2
  133. www.biorxiv.org www.biorxiv.org
    Phosphoproteomics identifies microglial Siglec-F inflammatory response during neurodegeneration
    1
    1. EMBOpress 25 Feb 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology neuroscience
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.05.12.090688v1
  134. www.biorxiv.org www.biorxiv.org
    CIGAR-seq, a CRISPR/Cas-based method for unbiased screening of novel mRNA modification regulators
    1
    1. EMBOpress 25 Feb 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology molecular biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.10.03.324715v1
  135. www.biorxiv.org www.biorxiv.org
    Dormancy as a spectrum measuring spore’s proximity to death and to replicative life
    1
    1. EMBOpress 25 Feb 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/747766v2
  136. www.biorxiv.org www.biorxiv.org
    The transcriptome dynamics of single cells during the cell cycle
    1
    1. EMBOpress 25 Feb 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2019.12.23.887570v1
  137. www.biorxiv.org www.biorxiv.org
    Predictive features of gene expression variation reveal a mechanistic link between expression variation and differential expression
    1
    1. EMBOpress 25 Feb 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology genomics
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.02.10.942276v1
  138. www.biorxiv.org www.biorxiv.org
    Oncogenic mutant RAS activity is rescaled by the ERK/MAPK pathway
    1
    1. EMBOpress 25 Feb 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.02.17.952093v1
  139. www.biorxiv.org www.biorxiv.org
    CEN-tools: An integrative platform to identify the contexts of essential genes
    1
    1. EMBOpress 25 Feb 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.05.10.087668v2
  140. www.biorxiv.org www.biorxiv.org
    Genome-wide off-rates reveal how DNA binding dynamics shape transcription factor function
    1
    1. EMBOpress 25 Feb 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology molecular biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.05.03.074815v1
  141. www.biorxiv.org www.biorxiv.org
    Aggregation and Disaggregation Features of the Human Proteome
    1
    1. EMBOpress 25 Feb 2021

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.02.05.931675v1
  142. Oct 2020
  143. www.biorxiv.org www.biorxiv.org
    Programmable and portable CRISPR-Cas transcriptional activation in bacteria
    1
    1. EMBOpress 06 Oct 2020

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology synthetic biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.01.03.882431v2
  144. www.biorxiv.org www.biorxiv.org
    State transitions of a developmental oscillator
    1
    1. EMBOpress 06 Oct 2020

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/755421v2
  145. www.biorxiv.org www.biorxiv.org
    Predicting antigen-specificity of single T-cells based on TCR CDR3 regions
    1
    1. EMBOpress 06 Oct 2020

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology bioinformatics
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/734053v1
  146. www.biorxiv.org www.biorxiv.org
    Mapping of the nucleolar proteome reveals spatiotemporal organization related to intrinsic protein disorder
    1
    1. EMBOpress 06 Oct 2020

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology cell biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.01.30.923003v3
  147. doi.org doi.org
    https://doi.org/10.1101/2020.03.31.016048
    1
    1. EMBOpress 06 Oct 2020

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology cell biology
    Visit annotations in context

    Tags

    Annotators

    URL

    doi.org/10.1101/2020.03.31.016048
  148. www.biorxiv.org www.biorxiv.org
    The protein architecture of the endocytic coat analyzed by FRET
    1
    1. EMBOpress 06 Oct 2020

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology cell biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/480996v1
  149. www.biorxiv.org www.biorxiv.org
    Multiplexing cell-cell communication
    1
    1. EMBOpress 06 Oct 2020

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology synthetic biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/584664v1
  150. www.biorxiv.org www.biorxiv.org
    Hormonal dysregulation after prolonged HPA axis activation can be explained by changes of adrenal and corticotroph masses
    1
    1. EMBOpress 06 Oct 2020

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology physiology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.01.01.892596v2
  151. Jul 2020
  152. www.biorxiv.org www.biorxiv.org
    Drug mechanism-of-action discovery through the integration of pharmacological and CRISPR screens
    1
    1. EMBOpress 15 Jul 2020

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.01.14.905729v1
  153. www.biorxiv.org www.biorxiv.org
    Using deep mutational scanning data to benchmark computational phenotype predictors and identify pathogenic missense mutations
    1
    1. EMBOpress 15 Jul 2020

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology bioinformatics
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/855957v2
  154. www.biorxiv.org www.biorxiv.org
    Reduced proteasome activity in the aging brain results in ribosome stoichiometry loss and aggregation
    1
    1. EMBOpress 15 Jul 2020

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/577478v3
  155. www.biorxiv.org www.biorxiv.org
    Exploring endocytic compartment morphology with systematic genetics and single cell image analysis
    1
    1. EMBOpress 15 Jul 2020

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology cell biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/724989v1
  156. www.biorxiv.org www.biorxiv.org
    STAT3-dependent systems-level analysis reveals PDK4 as an independent predictor of biochemical recurrence in prostate cancer
    1
    1. EMBOpress 15 Jul 2020

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology cancer biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/770701v1
  157. www.biorxiv.org www.biorxiv.org
    Controlling spatiotemporal pattern formation in a concentration gradient with a synthetic toggle switch
    1
    1. EMBOpress 15 Jul 2020

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology synthetic biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/849711v1
  158. www.biorxiv.org www.biorxiv.org
    CRISPR-TAPE: protein-centric CRISPR guide design for targeted proteome engineering
    1
    1. EMBOpress 15 Jul 2020

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology bioinformatics
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.02.26.965889v1
  159. www.biorxiv.org www.biorxiv.org
    Co-catabolism of arginine and succinate drives symbiotic nitrogen fixation
    1
    1. EMBOpress 15 Jul 2020

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology plant biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/741314v2
  160. www.biorxiv.org www.biorxiv.org
    Measuring glycolytic flux in single yeast cells with an orthogonal synthetic biosensor
    1
    1. EMBOpress 15 Jul 2020

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology synthetic biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/682302v1
  161. www.biorxiv.org www.biorxiv.org
    Digitalizing heterologous gene expression in Gram-negative bacteria with a portable on/off module
    1
    1. EMBOpress 15 Jul 2020

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology synthetic biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/783506v1
  162. www.biorxiv.org www.biorxiv.org
    Machine characterization of rat toxin responses identifies disease states, tolerance mechanisms and organ to whole-body communication
    1
    1. EMBOpress 15 Jul 2020

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/322446v1
  163. www.biorxiv.org www.biorxiv.org
    The impact of the genetic background on gene deletion phenotypes in Saccharomyces cerevisiae
    1
    1. EMBOpress 15 Jul 2020

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology genetics
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/487439v1
  164. www.biorxiv.org www.biorxiv.org
    Stochastic transcription in the p53-mediated response to DNA damage is modulated by burst frequency
    1
    1. EMBOpress 15 Jul 2020

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/679449v1
  165. www.biorxiv.org www.biorxiv.org
    Robust and conserved stochastic self-assembly mechanism for dynamic ParB-parS partition complexes on bacterial chromosomes and plasmids
    1
    1. EMBOpress 15 Jul 2020

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/345066v1
  166. www.biorxiv.org www.biorxiv.org
    Temporal perturbation of Erk dynamics reveals network architecture of FGF2-MAPK signaling
    1
    1. EMBOpress 15 Jul 2020

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/629287v1
  167. Jun 2020
  168. www.biorxiv.org www.biorxiv.org
    A natural variant of the sole pyruvate kinase of fission yeast lowers glycolytic flux triggering increased respiration and oxidative-stress resistance but decreased growth
    1
    1. EMBOpress 04 Jun 2020

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology genetics
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/770768v1
  169. www.biorxiv.org www.biorxiv.org
    Regulatory kinase genetic interaction profiles differ between environmental conditions and cellular states
    1
    1. EMBOpress 04 Jun 2020

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology genetics
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/735720v1
  170. www.biorxiv.org www.biorxiv.org
    Impact of C-terminal amino acid composition on protein expression in bacteria
    1
    1. EMBOpress 04 Jun 2020

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/751305v1
  171. www.biorxiv.org www.biorxiv.org
    Translational efficiency across healthy and tumor tissues is proliferation-related
    1
    1. EMBOpress 04 Jun 2020

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/782227v1
  172. www.biorxiv.org www.biorxiv.org
    Time-resolved genome-scale profiling reveals a causal expression network
    1
    1. EMBOpress 04 Jun 2020

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/619577v2
  173. www.biorxiv.org www.biorxiv.org
    Patient-specific logic models of signaling pathways from screenings on cancer biopsies to prioritize personalized combination therapies
    1
    1. EMBOpress 04 Jun 2020

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/422998v1
  174. www.biorxiv.org www.biorxiv.org
    Mammalian gene expression variability is explained by underlying cell state
    1
    1. EMBOpress 04 Jun 2020

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/626424v1
  175. May 2020
  176. journals.plos.org journals.plos.org
    Flocking in complex environments—Attention trade-offs in collective information processing
    1
    1. edampf 29 May 2020

      Rahmani P, Peruani F, Romanczuk P (2020) Flocking in complex environments—Attention trade-offs in collective information processing. PLoS Comput Biol 16(4): e1007697. https://doi.org/10.1371/journal.pcbi.1007697

      is:preprint lang:en behavioral science collective behavior response interaction cognitive science social systems biology attention processing
    Visit annotations in context

    Tags

    Annotators

    URL

    journals.plos.org/ploscompbiol/article
  177. Jan 2020
  178. www.lesswrong.com www.lesswrong.com
    Book Review: Design Principles of Biological Circuits - LessWrong 2.0
    1
    1. pbk1 06 Jan 2020
      A final word: when we do not understand something, it does not look like there is anything to be understood at all - it just looks like random noise. Just because it looks like noise does not mean there is no hidden structure.

      Excellent statement! Could this be the guiding principle of the current big data boom in biology?

      noise systems biology big data
    Visit annotations in context

    Tags

    Annotators

    URL

    lesswrong.com/posts/bNXdnRTpSXk9p4zmi/book-review-design-principles-of-biological-circuits
  179. Nov 2019
  180. www.biorxiv.org www.biorxiv.org
    Sufficiency analysis of estrogen responsive enhancers using synthetic activators
    1
    1. EMBOpress 26 Nov 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Life Science Alliance systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/479709v2
  181. www.biorxiv.org www.biorxiv.org
    Combinatorial prediction of gene-marker panels from single-cell transcriptomic data.
    1
    1. EMBOpress 26 Nov 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology bioinformatics
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/655753v2
  182. www.biorxiv.org www.biorxiv.org
    Estrogen receptor alpha controls gene expression via translational offsetting
    1
    1. EMBOpress 26 Nov 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress The EMBO Journal systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/507574v1
  183. www.biorxiv.org www.biorxiv.org
    Paralog dependency indirectly affects the robustness of human cells
    1
    1. EMBOpress 26 Nov 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology evolutionary biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/552208v3
  184. www.biorxiv.org www.biorxiv.org
    Endogenous fluctuations of OCT4 and SOX2 bias pluripotent cell fate decisions
    1
    1. EMBOpress 26 Nov 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology developmental biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/299073v3
  185. www.biorxiv.org www.biorxiv.org
    An integrated workflow for cross-linking/mass spectrometry
    1
    1. EMBOpress 26 Nov 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology biochemistry
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/355396v2
  186. Sep 2019
  187. www.biorxiv.org www.biorxiv.org
    Hierarchical organization of the human cell from a cancer coessentiality network
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Life Science Alliance systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/328880v1
  188. www.biorxiv.org www.biorxiv.org
    An integrative machine learning approach for prediction of toxicity-related drug safety
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Life Science Alliance systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/455667v1
  189. www.biorxiv.org www.biorxiv.org
    Co-existing feedback loops generate tissue-specific circadian rhythms
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Life Science Alliance systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/304451v1
  190. www.biorxiv.org www.biorxiv.org
    Multi-region proteome analysis quantifies spatial heterogeneity of prostate tissue biomarkers
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Life Science Alliance systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/250167v1
  191. www.biorxiv.org www.biorxiv.org
    Mapping In Vivo O-Glycoproteome Using Site-specific Extraction of O-linked glycopeptides (EXoO)
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/368282v1
  192. www.biorxiv.org www.biorxiv.org
    Disentangling bacterial invasiveness from lethality in an experimental host-pathogen system
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology ecology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/361584v1
  193. www.biorxiv.org www.biorxiv.org
    Absolute quantification of translational regulation and burden using combined sequencing approaches
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology synthetic biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/338939v2
  194. www.biorxiv.org www.biorxiv.org
    Mechanistic causes of constrained phenotypic variation revealed by synthetic gene regulatory networks
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/184325v2
  195. www.biorxiv.org www.biorxiv.org
    The fitness cost and benefit of phase separated protein deposits
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/574657v2
  196. www.biorxiv.org www.biorxiv.org
    Defining the RNA Interactome by Total RNA-Associated Protein Purification
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology cell biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/436253v1
  197. www.biorxiv.org www.biorxiv.org
    Genome-wide prediction of synthetic rescue mediators of resistance to targeted and immunotherapy
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology cancer biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/284240v2
  198. www.biorxiv.org www.biorxiv.org
    Evidence that the cell cycle is a series of uncoupled, memoryless phases
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/283614v1
  199. www.biorxiv.org www.biorxiv.org
    netDx: Patient classification using integrated patient similarity networks
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology bioinformatics
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/084418v4
  200. www.biorxiv.org www.biorxiv.org
    De novo Gene Signature Identification from Single-Cell RNA-Seq with Hierarchical Poisson Factorization
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/367003v1
  201. www.biorxiv.org www.biorxiv.org
    Quantification and discovery of sequence determinants of protein per mRNA amount in 29 human tissues
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/353763v1
  202. www.biorxiv.org www.biorxiv.org
    A deep proteome and transcriptome abundance atlas of 29 healthy human tissues
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/357137v1
  203. www.biorxiv.org www.biorxiv.org
    Widespread inter-individual gene expression variability in Arabidopsis thaliana
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology plant biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/335380v2
  204. www.biorxiv.org www.biorxiv.org
    Complex-centric proteome profiling by SEC-SWATH-MS
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/323683v2
  205. www.biorxiv.org www.biorxiv.org
    High-resolution mapping of cancer cell networks using co-functional interactions
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology genomics
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/369751v1
  206. www.biorxiv.org www.biorxiv.org
    Functional Compensation Between Hematopoietic Stem Cells In Vivo
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress EMBO reports systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/236398v1
  207. www.biorxiv.org www.biorxiv.org
    Synthesis and degradation of FtsZ determines the first cell division in starved bacteria
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology microbiology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/314922v1
  208. www.biorxiv.org www.biorxiv.org
    Fibroblasts from metastatic sites induce broad-spectrum drug desensitization via modulation of mitochondrial priming
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology cancer biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/197376v1
  209. www.biorxiv.org www.biorxiv.org
    Non-canonical circadian oscillations in Drosophila S2 cells drive gene-expression cycles coupled to metabolic oscillations
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/191338v1
  210. www.biorxiv.org www.biorxiv.org
    Bicoid gradient formation mechanism and dynamics revealed by protein lifetime analysis
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology developmental biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/280834v1
  211. www.biorxiv.org www.biorxiv.org
    Ratiometric Distribution Of OCT4 During Stem Cell Division Controls The Balance Between Self-Renewal And Differentiation
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/137299v2
  212. www.biorxiv.org www.biorxiv.org
    Multi-Omics factor analysis disentangles heterogeneity in blood cancer
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology bioinformatics
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/217554v2
  213. www.biorxiv.org www.biorxiv.org
    Fibroblast state switching orchestrates dermal maturation and wound healing
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/236232v2
  214. www.biorxiv.org www.biorxiv.org
    Genomics of cellular proliferation under periodic stress
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/129163v1
  215. www.biorxiv.org www.biorxiv.org
    MODELING SIGNALING-DEPENDENT PLURIPOTENT CELL STATES WITH BOOLEAN LOGIC CAN PREDICT CELL FATE TRANSITIONS
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/115683v2
  216. www.biorxiv.org www.biorxiv.org
    Genome-wide phenotypic analysis of growth, cell morphogenesis and cellcycle events in Escherichia coli.
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology microbiology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/101832v3
  217. www.biorxiv.org www.biorxiv.org
    A synthesis of over 9,000 mass spectrometry experiments reveals the core set of human protein complexes
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/092361v1
  218. www.biorxiv.org www.biorxiv.org
    A two-state photoconversion model predicts the spectral response dynamics of optogenetic systems
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology synthetic biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/081430v1
  219. www.biorxiv.org www.biorxiv.org
    Unraveling mitotic protein networks by 3D multiplexed epitope drug screening
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/231779v2
  220. www.biorxiv.org www.biorxiv.org
    Mapping DNA damage-dependent genetic interactions in yeast via orgy mating and barcode fusion genetics
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/181750v2
  221. www.biorxiv.org www.biorxiv.org
    Redesigning chromosomes to optimize conformation capture (Hi-C) assays
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology synthetic biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/169847v2
  222. www.biorxiv.org www.biorxiv.org
    Deciphering microbial interactions in synthetic human gut microbiome communities
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/228395v1
  223. www.biorxiv.org www.biorxiv.org
    Expression variation and covariation impair analog and enable binary signaling control
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/244236v1
  224. www.biorxiv.org www.biorxiv.org
    Timing of gene expression in a cell-fate decision system
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/197103v1
  225. www.biorxiv.org www.biorxiv.org
    Photoperiodic control of the Arabidopsis proteome reveals a translational coincidence mechanism
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology plant biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/182071v1
  226. www.biorxiv.org www.biorxiv.org
    A Map Of Genetic Interactions In Cancer Cells
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/120964v2
  227. www.biorxiv.org www.biorxiv.org
    Antisense transcription-dependent chromatin signature modulates sense transcription and transcript dynamics
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/187237v1
  228. www.biorxiv.org www.biorxiv.org
    Assigning Function To Natural Allelic Variation Via Dynamic Modeling Of Gene Network Induction
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/140467v1
  229. www.biorxiv.org www.biorxiv.org
    Expanding the Atlas of Functional Missense Variation for Human Genes
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology molecular biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/166595v2
  230. www.biorxiv.org www.biorxiv.org
    Resolving Drug Effects In Patient-Derived Cancer Cells Links Organoid Responses To Genome Alterations
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology cancer biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/124446v1
  231. www.biorxiv.org www.biorxiv.org
    The Landscape Of Human Mutually Exclusive Splicing
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology bioinformatics
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/133215v1
  232. www.biorxiv.org www.biorxiv.org
    From word models to executable models of signaling networks using automated assembly
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/119834v3
  233. www.biorxiv.org www.biorxiv.org
    CRISPR/Cas9 screening using unique molecular identifiers
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology genomics
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/114355v2
  234. www.biorxiv.org www.biorxiv.org
    In Situ Genotyping Of A Pooled Strain Library After Characterizing Complex Phenotypes
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology systems biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/142729v1
  235. www.biorxiv.org www.biorxiv.org
    A Theory That Predicts Behaviors Of Disordered Cytoskeletal Networks
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology cell biology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/138537v1
  236. www.biorxiv.org www.biorxiv.org
    High-throughput CRISPRi phenotyping in Streptococcus pneumoniae identifies new essential genes involved in cell wall synthesis and competence development
    1
    1. EMBOpress 22 Sep 2019

      Transparent Peer Review

      Download the complete Review Process [PDF] including:

      • reviews
      • authors' reply
      • editorial decisions

      </br>

      PeerReviewed EMBOPress Molecular Systems Biology microbiology
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/088336v1