RRID:CVCL_0030
DOI: 10.7554/eLife.18825
Resource: (BCRC Cat# 60005, RRID:CVCL_0030)
Curator: @scibot
SciCrunch record: RRID:CVCL_0030
RRID:CVCL_0030
DOI: 10.7554/eLife.18825
Resource: (BCRC Cat# 60005, RRID:CVCL_0030)
Curator: @scibot
SciCrunch record: RRID:CVCL_0030
RRID:CVCL_1926
DOI: 10.7554/eLife.18825
Resource: (ATCC Cat# CRL-11268, RRID:CVCL_1926)
Curator: @scibot
SciCrunch record: RRID:CVCL_1926
RRID:SCR_014246
DOI: 10.7554/eLife.32032
Resource: ImageQuant (RRID:SCR_014246)
Curator: @scibot
SciCrunch record: RRID:SCR_014246
SCR_011853
DOI: 10.7554/eLife.22939
Resource: CLC Genomics Workbench (RRID:SCR_011853)
Curator: @scibot
SciCrunch record: RRID:SCR_011853
SCR_011853
DOI: 10.7554/eLife.22939
Resource: CLC Genomics Workbench (RRID:SCR_011853)
Curator: @scibot
SciCrunch record: RRID:SCR_011853
RRID:AB_2107112
DOI: 10.7554/eLife.20898
Resource: (Everest Biotech Cat# EB05226, RRID:AB_2107112)
Curator: @scibot
SciCrunch record: RRID:AB_2107112
RRID:AB_355500
DOI: 10.7554/eLife.49818
Resource: (R and D Systems Cat# AF644, RRID:AB_355500)
Curator: @scibot
SciCrunch record: RRID:AB_355500
RRID:AB_331377
DOI: 10.7554/eLife.49818
Resource: (Cell Signaling Technology Cat# 2478, RRID:AB_331377)
Curator: @scibot
SciCrunch record: RRID:AB_331377
RRID:CVCL_0399
DOI: 10.7554/eLife.27301
Resource: (CLS Cat# 300266/p487_LOVO, RRID:CVCL_0399)
Curator: @scibot
SciCrunch record: RRID:CVCL_0399
RRID:SCR_014631
DOI: 10.7554/eLife.19993
Resource: FATCAT (RRID:SCR_014631)
Curator: @scibot
SciCrunch record: RRID:SCR_014631
RRID:SCR_004642
DOI: 10.7554/eLife.19993
Resource: ModBase (RRID:SCR_004642)
Curator: @scibot
SciCrunch record: RRID:SCR_004642
RRID:SCR_002987
DOI: 10.7554/eLife.26876
Resource: BioMart Project (RRID:SCR_002987)
Curator: @scibot
SciCrunch record: RRID:SCR_002987
RRID:AB_10597597
DOI: 10.7554/eLife.44360
Resource: (Thermo Fisher Scientific Cat# 11-0149-42, RRID:AB_10597597)
Curator: @scibot
SciCrunch record: RRID:AB_10597597
RRID:SCR_002577
DOI: 10.7554/eLife.19760
Resource: scikit-learn (RRID:SCR_002577)
Curator: @scibot
SciCrunch record: RRID:SCR_002577
RRID:SCR_008520
DOI: 10.7554/eLife.64148
Resource: FlowJo (RRID:SCR_008520)
Curator: @scibot
SciCrunch record: RRID:SCR_008520
RRID:SCR_011793
DOI: 10.7554/eLife.64148
Resource: Integrative Genomics Viewer (RRID:SCR_011793)
Curator: @scibot
SciCrunch record: RRID:SCR_011793
RRID:AB_10975474
DOI: 10.7554/eLife.36158
Resource: (Abcam Cat# ab124827, RRID:AB_10975474)
Curator: @Naa003
SciCrunch record: RRID:AB_10975474
RRID:AB_297852
DOI: 10.7554/eLife.38992
Resource: (Abcam Cat# ab11213, RRID:AB_297852)
Curator: @evieth
SciCrunch record: RRID:AB_297852
RRID:CVCL_0224
DOI: 10.7554/eLife.45306
Resource: (BCRC Cat# 60094, RRID:CVCL_0224)
Curator: @ethanbadger
SciCrunch record: RRID:CVCL_0224
Addgene plasmid #1817
DOI: 10.7554/eLife.48363
Resource: RRID:Addgene_1817
Curator: @Naa003
SciCrunch record: RRID:Addgene_1817
Jackson Laboratory, Stock #000664
DOI: 10.7554/eLife.49180
Resource: (IMSR Cat# JAX_000664,RRID:IMSR_JAX:000664)
Curator: @Naa003
SciCrunch record: RRID:IMSR_JAX:000664
RRID:Addgene_49410
DOI: 10.7554/eLife.46592
Resource: RRID:Addgene_49410
Curator: @Naa003
SciCrunch record: RRID:Addgene_49410
RRID:AB_2811127
DOI: 10.7554/eLife.48191
Resource: (Novus Cat# NBP2-20564, RRID:AB_2811127)
Curator: @Naa003
SciCrunch record: RRID:AB_2811127
RRID: WB-STRAIN:PTM288
DOI: 10.7554/eLife.48119
Resource: (WB Cat# PTM288,RRID:WB-STRAIN:PTM288)
Curator: @Naa003
SciCrunch record: RRID:WB-STRAIN:PTM288
RRID: WB-STRAIN:CX12311
DOI: 10.7554/eLife.48119
Resource: (WB Cat# CX12311,RRID:WB-STRAIN:CX12311)
Curator: @Naa003
SciCrunch record: RRID:WB-STRAIN:CX12311
RRID: WB-STRAIN:OP50
DOI: 10.7554/eLife.48119
Resource: (WB Cat# OP50,RRID:WB-STRAIN:OP50)
Curator: @Naa003
SciCrunch record: RRID:WB-STRAIN:OP50
RRID:WB-STRAIN:CU6372
DOI: 10.7554/eLife.49158
Resource: (WB Cat# CU6372,RRID:WB-STRAIN:CU6372)
Curator: @Naa003
SciCrunch record: RRID:WB-STRAIN:CU6372
RRID:WB-STRAIN:CU5991
DOI: 10.7554/eLife.49158
Resource: (WB Cat# CU5991,RRID:WB-STRAIN:CU5991)
Curator: @Naa003
SciCrunch record: RRID:WB-STRAIN:CU5991
RRID:WB-STRAIN:RB1206
DOI: 10.7554/eLife.49158
Resource: (WB Cat# RB1206,RRID:WB-STRAIN:RB1206)
Curator: @Naa003
SciCrunch record: RRID:WB-STRAIN:RB1206
RRID:WB-STRAIN:RB754
DOI: 10.7554/eLife.49158
Resource: (WB Cat# RB754,RRID:WB-STRAIN:RB754)
Curator: @Naa003
SciCrunch record: RRID:WB-STRAIN:RB754
RRID:WB-STRAIN:VC222
DOI: 10.7554/eLife.49158
Resource: (WB Cat# VC222,RRID:WB-STRAIN:VC222)
Curator: @Naa003
SciCrunch record: RRID:WB-STRAIN:VC222
RRID:SCR_007366
DOI: 10.7554/eLife.47566
Resource: FilamentTracer (RRID:SCR_007366)
Curator: @Naa003
SciCrunch record: RRID:SCR_007366
Addgene (#26001
DOI: 10.7554/eLife.47646
Resource: RRID:Addgene_26001
Curator: @Naa003
SciCrunch record: RRID:Addgene_26001
RRID: AB_2661807
DOI: 10.7554/eLife.48051
Resource: (Fluidigm Cat# 3170001, RRID:AB_2661807)
Curator: @Naa003
SciCrunch record: RRID:AB_2661807
Prism
DOI: 10.7554/eLife.48051
Resource: GraphPad Prism (RRID:SCR_002798)
Curator: @Naa003
SciCrunch record: RRID:SCR_002798
ggplot2
DOI: 10.7554/eLife.48051
Resource: ggplot2 (RRID:SCR_014601)
Curator: @Naa003
SciCrunch record: RRID:SCR_014601
R
DOI: 10.7554/eLife.48051
Resource: R Project for Statistical Computing (RRID:SCR_001905)
Curator: @Naa003
SciCrunch record: RRID:SCR_001905
Definiens Developer XD
DOI: 10.7554/eLife.48051
Resource: Definiens Developer XD (RRID:SCR_014283)
Curator: @Naa003
SciCrunch record: RRID:SCR_014283
Image J
DOI: 10.7554/eLife.48051
Resource: ImageJ (RRID:SCR_003070)
Curator: @Naa003
SciCrunch record: RRID:SCR_003070
CellProfiler
DOI: 10.7554/eLife.48051
Resource: CellProfiler Image Analysis Software (RRID:SCR_007358)
Curator: @Naa003
SciCrunch record: RRID:SCR_007358
Zen
DOI: 10.7554/eLife.48051
Resource: ZEN Digital Imaging for Light Microscopy (RRID:SCR_013672)
Curator: @Naa003
SciCrunch record: RRID:SCR_013672
Addgene Plasmid #12263
DOI: 10.7554/eLife.48318
Resource: RRID:Addgene_12263
Curator: @Naa003
SciCrunch record: RRID:Addgene_12263
Hypermut
DOI: 10.7554/eLife.48318
Resource: Hypermut (RRID:SCR_014933)
Curator: @Naa003
SciCrunch record: RRID:SCR_014933
Image Studio Lite
DOI: 10.7554/eLife.48318
Resource: Image Studio Lite (RRID:SCR_013715)
Curator: @Naa003
SciCrunch record: RRID:SCR_013715
FlowJo
DOI: 10.7554/eLife.48318
Resource: FlowJo (RRID:SCR_008520)
Curator: @Naa003
SciCrunch record: RRID:SCR_008520
Prism
DOI: 10.7554/eLife.48318
Resource: GraphPad Prism (RRID:SCR_002798)
Curator: @Naa003
SciCrunch record: RRID:SCR_002798
ANTI-FLAG M2 Affinity Gel
DOI: 10.7554/eLife.48318
Resource: (Sigma-Aldrich Cat# A2220, RRID:AB_10063035)
Curator: @Naa003
SciCrunch record: RRID:AB_10063035
EZviewTM Red Anti-HA Affinity Gel
DOI: 10.7554/eLife.48318
Resource: (Sigma-Aldrich Cat# E6779, RRID:AB_10109562)
Curator: @Naa003
SciCrunch record: RRID:AB_10109562
Goat Anti-Mouse IgG H and L (DyLight 594) preadsorbed
DOI: 10.7554/eLife.48318
Resource: (Abcam Cat# ab96881, RRID:AB_10680252)
Curator: @Naa003
SciCrunch record: RRID:AB_10680252
Goat Anti-Mouse IgG H and L (DyLight 488) preadsorbed
DOI: 10.7554/eLife.48318
Resource: (Abcam Cat# ab96879, RRID:AB_10687475)
Curator: @Naa003
SciCrunch record: RRID:AB_10687475
IRDye 800CW Goat Anti-Rabbit IgG, Conjugated Antibody
DOI: 10.7554/eLife.48318
Resource: (LI-COR Biosciences Cat# 926-32211, RRID:AB_621843)
Curator: @Naa003
SciCrunch record: RRID:AB_621843
IRDye 680RD Goat anti-Mouse IgG (H + L), 0.5 mg Antibody
DOI: 10.7554/eLife.48318
Resource: (LI-COR Biosciences Cat# 926-68070, RRID:AB_10956588)
Curator: @Naa003
SciCrunch record: RRID:AB_10956588
Ubiquitin Rabbit Polyclonal antibody
DOI: 10.7554/eLife.48318
Resource: (Proteintech Cat# 10201-2-AP, RRID:AB_671515)
Curator: @Naa003
SciCrunch record: RRID:AB_671515
GFP (D5.1) XP Rabbit mAb
DOI: 10.7554/eLife.48318
Resource: (Cell Signaling Technology Cat# 2956, RRID:AB_1196615)
Curator: @Naa003
SciCrunch record: RRID:AB_1196615
Anti-APOBEC3G/A3G antibody
DOI: 10.7554/eLife.48318
Resource: (Abcam Cat# ab75560, RRID:AB_10676129)
Curator: @Naa003
SciCrunch record: RRID:AB_10676129
USP18 (D4E7) Rabbit mAb
DOI: 10.7554/eLife.48318
Resource: (Cell Signaling Technology Cat# 4813, RRID:AB_10614342)
Curator: @Naa003
SciCrunch record: RRID:AB_10614342
USP49 Rabbit Polyclonal antibody
DOI: 10.7554/eLife.48318
Resource: (Proteintech Cat# 18066-1-AP, RRID:AB_10643992)
Curator: @Naa003
SciCrunch record: RRID:AB_10643992
beta Actin Mouse McAb
DOI: 10.7554/eLife.48318
Resource: (Proteintech Cat# 66009-1-Ig, RRID:AB_2687938)
Curator: @Naa003
SciCrunch record: RRID:AB_2687938
Rabbit Polyclonal Anti-GAPDH Antibody
DOI: 10.7554/eLife.48318
Resource: (Proteintech Cat# 10494-1-AP, RRID:AB_2263076)
Curator: @Naa003
SciCrunch record: RRID:AB_2263076
Rabbit Anti-DDDDK Tag Polyclonal Antibody, Unconjugated
DOI: 10.7554/eLife.48318
Resource: (MBL International Cat# PM020, RRID:AB_591224)
Curator: @Naa003
SciCrunch record: RRID:AB_591224
Mouse Monoclonal Anti-HA-Tag Antibody
DOI: 10.7554/eLife.48318
Resource: (MBL International Cat# M180-3, RRID:AB_10951811)
Curator: @Naa003
SciCrunch record: RRID:AB_10951811
Jackson Laboratories Stock #007909
DOI: 10.7554/eLife.49253
Resource: (IMSR Cat# JAX_007909,RRID:IMSR_JAX:007909)
Curator: @Naa003
SciCrunch record: RRID:IMSR_JAX:007909
Jackson Laboratories Stock #003573
DOI: 10.7554/eLife.49253
Resource: (IMSR Cat# JAX_003573,RRID:IMSR_JAX:003573)
Curator: @Naa003
SciCrunch record: RRID:IMSR_JAX:003573
Microsoft Excel
DOI: 10.7554/eLife.49253
Resource: Microsoft Excel (RRID:SCR_016137)
Curator: @Naa003
SciCrunch record: RRID:SCR_016137
MicroCal Origin
DOI: 10.7554/eLife.49253
Resource: Microcal Origin (RRID:SCR_002815)
Curator: @Naa003
SciCrunch record: RRID:SCR_002815
Anti-FLAG affinity gel
DOI: 10.7554/eLife.49253
Resource: (Sigma-Aldrich Cat# A2220, RRID:AB_10063035)
Curator: @Naa003
SciCrunch record: RRID:AB_10063035
RFP-trap agarose beads
DOI: 10.7554/eLife.49253
Resource: (ChromoTek Cat# rta-20, RRID:AB_2631362)
Curator: @Naa003
SciCrunch record: RRID:AB_2631362
Anti-ubiquitin, VU-1
DOI: 10.7554/eLife.49253
Resource: (LifeSensors Cat# VU101, RRID:AB_2716558)
Curator: @Naa003
SciCrunch record: RRID:AB_2716558
Anti-actin
DOI: 10.7554/eLife.49253
Resource: (Sigma-Aldrich Cat# A5060, RRID:AB_476738)
Curator: @Naa003
SciCrunch record: RRID:AB_476738
Anti-RyR
DOI: 10.7554/eLife.49253
Resource: (Thermo Fisher Scientific Cat# MA3-916, RRID:AB_2183054)
Curator: @Naa003
SciCrunch record: RRID:AB_2183054
Anti-Rab7
DOI: 10.7554/eLife.49253
Resource: (Cell Signaling Technology Cat# 9367, RRID:AB_1904103)
Curator: @Naa003
SciCrunch record: RRID:AB_1904103
Anti-Rab5
DOI: 10.7554/eLife.49253
Resource: (Cell Signaling Technology Cat# 3547, RRID:AB_2300649)
Curator: @Naa003
SciCrunch record: RRID:AB_2300649
Anti-CaVβ2
DOI: 10.7554/eLife.49253
Resource: (Alomone Labs Cat# ACC-105, RRID:AB_2340905)
Curator: @Naa003
SciCrunch record: RRID:AB_2340905
Anti-α1C
DOI: 10.7554/eLife.49253
Resource: (Alomone Labs Cat# ACC-003, RRID:AB_2039771)
Curator: @Naa003
SciCrunch record: RRID:AB_2039771
RRID:AB_390918
DOI: 10.7554/eLife.49677
Resource: (Roche Cat# 11867423001, RRID:AB_390918)
Curator: @Naa003
SciCrunch record: RRID:AB_390918
RRID:AB_2313567
DOI: 10.7554/eLife.49677
Resource: (Jackson ImmunoResearch Labs Cat# 111-035-003, RRID:AB_2313567)
Curator: @Naa003
SciCrunch record: RRID:AB_2313567
RRID:AB_10015289
DOI: 10.7554/eLife.49677
Resource: (Yeasen Biotech Cat# 33201ES60, RRID:AB_10015289)
Curator: @Naa003
SciCrunch record: RRID:AB_10015289
RRID:AB_2618386
DOI: 10.7554/eLife.49677
Resource: (DSHB Cat# P1C1-SCAR, RRID:AB_2618386)
Curator: @Naa003
SciCrunch record: RRID:AB_2618386
RRID:AB_142018
DOI: 10.7554/eLife.49677
Resource: (Thermo Fisher Scientific Cat# A-11073, RRID:AB_2534117)
Curator: @Naa003
SciCrunch record: RRID:AB_142018
RRID:AB_2534069
DOI: 10.7554/eLife.49677
Resource: (Thermo Fisher Scientific Cat# A-11001, RRID:AB_2534069)
Curator: @Naa003
SciCrunch record: RRID:AB_2534069
RRID:AB_141874
DOI: 10.7554/eLife.49677
Resource: (Molecular Probes Cat# A-11077, RRID:AB_141874)
Curator: @Naa003
SciCrunch record: RRID:AB_141874
RRID:AB_528161
DOI: 10.7554/eLife.49677
Resource: (DSHB Cat# 24B10, RRID:AB_528161)
Curator: @Naa003
SciCrunch record: RRID:AB_528161
RRID:BDSC_14255
DOI: 10.7554/eLife.49677
Resource: (BDSC Cat# 14255,RRID:BDSC_14255)
Curator: @Naa003
SciCrunch record: RRID:BDSC_14255
RRID:BDSC_8754
DOI: 10.7554/eLife.49677
Resource: (BDSC Cat# 8754,RRID:BDSC_8754)
Curator: @Naa003
SciCrunch record: RRID:BDSC_8754
RRID:DGGR_109612
DOI: 10.7554/eLife.49677
Resource: (DGGR Cat# 109612,RRID:DGGR_109612)
Curator: @Naa003
SciCrunch record: RRID:DGGR_109612
RRID:BDSC_28725
DOI: 10.7554/eLife.49677
Resource: (BDSC Cat# 28725,RRID:BDSC_28725)
Curator: @Naa003
SciCrunch record: RRID:BDSC_28725
RRID:BDSC_36121
DOI: 10.7554/eLife.49677
Resource: (BDSC Cat# 36121,RRID:BDSC_36121)
Curator: @Naa003
SciCrunch record: RRID:BDSC_36121
RRID:AB_390917
DOI: 10.7554/eLife.49677
Resource: (Roche Cat# 12013819001, RRID:AB_390917)
Curator: @Naa003
SciCrunch record: RRID:AB_390917
Vecta Shield
DOI: 10.7554/eLife.49677
Resource: (Vector Laboratories Cat# H-1200, RRID:AB_2336790)
Curator: @Naa003
SciCrunch record: RRID:AB_2336790
RRID:WB-STRAIN:TP12
DOI: 10.7554/eLife.43226
Resource: (WB Cat# TP12,RRID:WB-STRAIN:TP12)
Curator: @Naa003
SciCrunch record: RRID:WB-STRAIN:TP12
Igor Pro
DOI: 10.7554/eLife.43226
Resource: IGOR Pro (RRID:SCR_000325)
Curator: @Naa003
SciCrunch record: RRID:SCR_000325
MATLAB
DOI: 10.7554/eLife.43226
Resource: MATLAB (RRID:SCR_001622)
Curator: @Naa003
SciCrunch record: RRID:SCR_001622
Patchmaster
DOI: 10.7554/eLife.43226
Resource: Patchmaster (RRID:SCR_000034)
Curator: @Naa003
SciCrunch record: RRID:SCR_000034
Addgene 42230
DOI: 10.7554/eLife.45542
Resource: RRID:Addgene_42230
Curator: @Naa003
SciCrunch record: RRID:Addgene_42230
RRID: AB_2534079
DOI: 10.7554/eLife.45542
Resource: (Thermo Fisher Scientific Cat# A-11012, RRID:AB_2534079)
Curator: @Naa003
SciCrunch record: RRID:AB_2534079
Texas Red Streptavidin
DOI: 10.7554/eLife.45542
Resource: (Vector Laboratories Cat# SA-5006, RRID:AB_2336754)
Curator: @Naa003
SciCrunch record: RRID:AB_2336754
GraphPad Prism
DOI: 10.7554/eLife.45542
Resource: GraphPad Prism (RRID:SCR_002798)
Curator: @Naa003
SciCrunch record: RRID:SCR_002798
Adobe Illustrator
DOI: 10.7554/eLife.45542
Resource: Adobe Illustrator (RRID:SCR_010279)
Curator: @Naa003
SciCrunch record: RRID:SCR_010279
Adobe Photoshop
DOI: 10.7554/eLife.45542
Resource: Adobe Photoshop (RRID:SCR_014199)
Curator: @Naa003
SciCrunch record: RRID:SCR_014199
ImageJ
DOI: 10.7554/eLife.45542
Resource: ImageJ (RRID:SCR_003070)
Curator: @Naa003
SciCrunch record: RRID:SCR_003070
IRDye 680RD goat anti-rabbit IgG (H + L) secondary antibody
DOI: 10.7554/eLife.45542
Resource: (LI-COR Biosciences Cat# 925-68071, RRID:AB_2721181)
Curator: @Naa003
SciCrunch record: RRID:AB_2721181
IRDye 800CW goat anti-mouse IgG (H + L) secondary antibody
DOI: 10.7554/eLife.45542
Resource: (LI-COR Biosciences Cat# 925-32210, RRID:AB_2687825)
Curator: @Naa003
SciCrunch record: RRID:AB_2687825
HEK/293T
DOI: 10.7554/eLife.45542
Resource: (CCLV Cat# CCLV-RIE 1018, RRID:CVCL_0063)
Curator: @Naa003
SciCrunch record: RRID:CVCL_0063
plasmid #35432
DOI: 10.7554/eLife.48625
Resource: RRID:Addgene_35432
Curator: @Naa003
SciCrunch record: RRID:Addgene_35432
plasmid #12260
DOI: 10.7554/eLife.48625
Resource: RRID:Addgene_12260
Curator: @Naa003
SciCrunch record: RRID:Addgene_12260
R
DOI: 10.7554/eLife.48625
Resource: R Project for Statistical Computing (RRID:SCR_001905)
Curator: @Naa003
SciCrunch record: RRID:SCR_001905
MassIVE
DOI: 10.7554/eLife.48625
Resource: Mass spectrometry Interactive Virtual Environment (MassIVE) (RRID:SCR_013665)
Curator: @Naa003
SciCrunch record: RRID:SCR_013665
ImageJ
DOI: 10.7554/eLife.48625
Resource: ImageJ (RRID:SCR_003070)
Curator: @Naa003
SciCrunch record: RRID:SCR_003070
BDSC_68371
DOI: 10.7554/eLife.46839
Resource: (BDSC Cat# 68371,RRID:BDSC_68371)
Curator: @Naa003
SciCrunch record: RRID:BDSC_68371
BDSC_66480
DOI: 10.7554/eLife.46839
Resource: (BDSC Cat# 66480,RRID:BDSC_66480)
Curator: @Naa003
SciCrunch record: RRID:BDSC_66480
BDSC_30026
DOI: 10.7554/eLife.46839
Resource: (BDSC Cat# 30026,RRID:BDSC_30026)
Curator: @Naa003
SciCrunch record: RRID:BDSC_30026
BDSC_48228
DOI: 10.7554/eLife.46839
Resource: (BDSC Cat# 48228,RRID:BDSC_48228)
Curator: @Naa003
SciCrunch record: RRID:BDSC_48228
FIJI
DOI: 10.7554/eLife.48660
Resource: Fiji (RRID:SCR_002285)
Curator: @Naa003
SciCrunch record: RRID:SCR_002285
GraphPad Prism
DOI: 10.7554/eLife.48660
Resource: GraphPad Prism (RRID:SCR_002798)
Curator: @Naa003
SciCrunch record: RRID:SCR_002798
R
DOI: 10.7554/eLife.48660
Resource: R Project for Statistical Computing (RRID:SCR_001905)
Curator: @Naa003
SciCrunch record: RRID:SCR_001905
Cell Ranger Single Cell
DOI: 10.7554/eLife.48660
Resource: Cell Ranger (RRID:SCR_017344)
Curator: @Naa003
SciCrunch record: RRID:SCR_017344
Seurat
DOI: 10.7554/eLife.48660
Resource: SEURAT (RRID:SCR_007322)
Curator: @Naa003
SciCrunch record: RRID:SCR_007322
GraphPad-Prism
DOI: 10.7554/eLife.49673
Resource: GraphPad Prism (RRID:SCR_002798)
Curator: @Naa003
SciCrunch record: RRID:SCR_002798
HEK293 cells
DOI: 10.7554/eLife.49673
Resource: (IZSLER Cat# BS CL 129, RRID:CVCL_0045)
Curator: @Naa003
SciCrunch record: RRID:CVCL_0045
bedtools
DOI: 10.7554/eLife.49673
Resource: BEDTools (RRID:SCR_006646)
Curator: @Naa003
SciCrunch record: RRID:SCR_006646
crossmap
DOI: 10.7554/eLife.49673
Resource: CrossMap (RRID:SCR_001173)
Curator: @Naa003
SciCrunch record: RRID:SCR_001173
Bedops
DOI: 10.7554/eLife.49673
Resource: BEDOPS (RRID:SCR_012865)
Curator: @Naa003
SciCrunch record: RRID:SCR_012865
BWA
DOI: 10.7554/eLife.49673
Resource: BWA (RRID:SCR_010910)
Curator: @Naa003
SciCrunch record: RRID:SCR_010910
EBSeq
DOI: 10.7554/eLife.49673
Resource: EBSeq (RRID:SCR_003526)
Curator: @Naa003
SciCrunch record: RRID:SCR_003526
clusterProfiler
DOI: 10.7554/eLife.49673
Resource: clusterProfiler (RRID:SCR_016884)
Curator: @Naa003
SciCrunch record: RRID:SCR_016884
STAR
DOI: 10.7554/eLife.49673
Resource: STAR (RRID:SCR_015899)
Curator: @Naa003
SciCrunch record: RRID:SCR_015899
RSEM
DOI: 10.7554/eLife.49673
Resource: RSEM (RRID:SCR_013027)
Curator: @Naa003
SciCrunch record: RRID:SCR_013027
Cutadapt
DOI: 10.7554/eLife.49673
Resource: cutadapt (RRID:SCR_011841)
Curator: @Naa003
SciCrunch record: RRID:SCR_011841
RSeQC
DOI: 10.7554/eLife.49673
Resource: RSeQC (RRID:SCR_005275)
Curator: @Naa003
SciCrunch record: RRID:SCR_005275
Picard
DOI: 10.7554/eLife.49673
Resource: Picard (RRID:SCR_006525)
Curator: @Naa003
SciCrunch record: RRID:SCR_006525
FastQC
DOI: 10.7554/eLife.49673
Resource: FastQC (RRID:SCR_014583)
Curator: @Naa003
SciCrunch record: RRID:SCR_014583
Integrative Genomics Viewer
DOI: 10.7554/eLife.48725
Resource: Integrative Genomics Viewer (RRID:SCR_011793)
Curator: @Naa003
SciCrunch record: RRID:SCR_011793
Microsoft Excel
DOI: 10.7554/eLife.48725
Resource: Microsoft Excel (RRID:SCR_016137)
Curator: @Naa003
SciCrunch record: RRID:SCR_016137
R
DOI: 10.7554/eLife.48725
Resource: R Project for Statistical Computing (RRID:SCR_001905)
Curator: @Naa003
SciCrunch record: RRID:SCR_001905
ProSight Lite
DOI: 10.7554/eLife.48725
Resource: ProSight Lite (RRID:SCR_016908)
Curator: @Naa003
SciCrunch record: RRID:SCR_016908
Image J
DOI: 10.7554/eLife.48725
Resource: ImageJ (RRID:SCR_003070)
Curator: @Naa003
SciCrunch record: RRID:SCR_003070
R-Studio
DOI: 10.7554/eLife.48725
Resource: RStudio (RRID:SCR_000432)
Curator: @Naa003
SciCrunch record: RRID:SCR_000432
ggplot2
DOI: 10.7554/eLife.48725
Resource: ggplot2 (RRID:SCR_014601)
Curator: @Naa003
SciCrunch record: RRID:SCR_014601
ImageJ
DOI: 10.7554/eLife.46500
Resource: ImageJ (RRID:SCR_003070)
Curator: @Naa003
SciCrunch record: RRID:SCR_003070
Addgene: pMJ806
DOI: 10.7554/eLife.46500
Resource: RRID:Addgene_39312
Curator: @Naa003
SciCrunch record: RRID:Addgene_39312
SpyCas9
DOI: 10.7554/eLife.46500
Resource: (Abcam Cat# ab191468, RRID:AB_2692325)
Curator: @Naa003
SciCrunch record: RRID:AB_2692325
lentiCRISPR-EGFP sgRNA 1 (WT Cas9)
DOI: 10.7554/eLife.46500
Resource: RRID:Addgene_51760
Curator: @Naa003
SciCrunch record: RRID:Addgene_51760
pLenti CMV GFP Puro
DOI: 10.7554/eLife.46500
Resource: RRID:Addgene_17448
Curator: @Naa003
SciCrunch record: RRID:Addgene_17448
Dryad
DOI: 10.7554/eLife.47837
Resource: Dryad Digital Repository (RRID:SCR_005910)
Curator: @Naa003
SciCrunch record: RRID:SCR_005910
MATLAB
DOI: 10.7554/eLife.47837
Resource: MATLAB (RRID:SCR_001622)
Curator: @Naa003
SciCrunch record: RRID:SCR_001622
ImageJ
DOI: 10.7554/eLife.47837
Resource: ImageJ (RRID:SCR_003070)
Curator: @Naa003
SciCrunch record: RRID:SCR_003070
NeuroMatic
DOI: 10.7554/eLife.47837
Resource: NeuroMatic (RRID:SCR_004186)
Curator: @Naa003
SciCrunch record: RRID:SCR_004186
pCLAMP
DOI: 10.7554/eLife.47837
Resource: pClamp (RRID:SCR_011323)
Curator: @Naa003
SciCrunch record: RRID:SCR_011323
Igor Pro
DOI: 10.7554/eLife.47837
Resource: IGOR Pro (RRID:SCR_000325)
Curator: @Naa003
SciCrunch record: RRID:SCR_000325
MCID image analysis software
DOI: 10.7554/eLife.48311
Resource: MCID Analysis (RRID:SCR_014278)
Curator: @Naa003
SciCrunch record: RRID:SCR_014278
Sigmaplot
DOI: 10.7554/eLife.48311
Resource: SigmaPlot (RRID:SCR_003210)
Curator: @Naa003
SciCrunch record: RRID:SCR_003210
MATLAB
DOI: 10.7554/eLife.46321
Resource: MATLAB (RRID:SCR_001622)
Curator: @Naa003
SciCrunch record: RRID:SCR_001622
FlowJo
DOI: 10.7554/eLife.46677
Resource: FlowJo (RRID:SCR_008520)
Curator: @Naa003
SciCrunch record: RRID:SCR_008520
ImageJ
DOI: 10.7554/eLife.46677
Resource: ImageJ (RRID:SCR_003070)
Curator: @Naa003
SciCrunch record: RRID:SCR_003070
FACSDiva
DOI: 10.7554/eLife.47605
Resource: BD FACSDiva Software (RRID:SCR_001456)
Curator: @Naa003
SciCrunch record: RRID:SCR_001456
PK136 hybridoma
DOI: 10.7554/eLife.47605
Resource: (ATCC Cat# HB-191, RRID:CVCL_7695)
Curator: @Naa003
SciCrunch record: RRID:CVCL_7695
2.4G2 hybridoma
DOI: 10.7554/eLife.47605
Resource: (BCRJ Cat# 0006, RRID:CVCL_9148)
Curator: @Naa003
SciCrunch record: RRID:CVCL_9148
GSEA
DOI: 10.7554/eLife.47605
Resource: Gene Set Enrichment Analysis (RRID:SCR_003199)
Curator: @Naa003
SciCrunch record: RRID:SCR_003199
Kallisto
DOI: 10.7554/eLife.47605
Resource: kallisto (RRID:SCR_016582)
Curator: @Naa003
SciCrunch record: RRID:SCR_016582
DESeq2
DOI: 10.7554/eLife.47605
Resource: DESeq2 (RRID:SCR_015687)
Curator: @Naa003
SciCrunch record: RRID:SCR_015687
RStudio
DOI: 10.7554/eLife.47605
Resource: RStudio (RRID:SCR_000432)
Curator: @Naa003
SciCrunch record: RRID:SCR_000432
Homer
DOI: 10.7554/eLife.47605
Resource: HOMER (RRID:SCR_010881)
Curator: @Naa003
SciCrunch record: RRID:SCR_010881
deepTools
DOI: 10.7554/eLife.47605
Resource: Deeptools (RRID:SCR_016366)
Curator: @Naa003
SciCrunch record: RRID:SCR_016366
BEDTools
DOI: 10.7554/eLife.47605
Resource: BEDTools (RRID:SCR_006646)
Curator: @Naa003
SciCrunch record: RRID:SCR_006646
Picard
DOI: 10.7554/eLife.47605
Resource: Picard (RRID:SCR_006525)
Curator: @Naa003
SciCrunch record: RRID:SCR_006525
Samtools
DOI: 10.7554/eLife.47605
Resource: Samtools (RRID:SCR_002105)
Curator: @Naa003
SciCrunch record: RRID:SCR_002105
Bowtie
DOI: 10.7554/eLife.47605
Resource: Bowtie (RRID:SCR_005476)
Curator: @Naa003
SciCrunch record: RRID:SCR_005476
Pymol
DOI: 10.7554/eLife.46417
Resource: PyMOL (RRID:SCR_000305)
Curator: @Naa003
SciCrunch record: RRID:SCR_000305
UCSF Chimera
DOI: 10.7554/eLife.46417
Resource: UCSF Chimera (RRID:SCR_004097)
Curator: @Naa003
SciCrunch record: RRID:SCR_004097
COOT
DOI: 10.7554/eLife.46417
Resource: Coot (RRID:SCR_014222)
Curator: @Naa003
SciCrunch record: RRID:SCR_014222
Relion-3
DOI: 10.7554/eLife.46417
Resource: RELION (RRID:SCR_016274)
Curator: @Naa003
SciCrunch record: RRID:SCR_016274
CTFFIND
DOI: 10.7554/eLife.46417
Resource: CTFFIND (RRID:SCR_016732)
Curator: @Naa003
SciCrunch record: RRID:SCR_016732
Horseradish Peroxidase conjugated goat anti-rabbit secondary
DOI: 10.7554/eLife.46417
Resource: (Jackson ImmunoResearch Labs Cat# 111-035-144, RRID:AB_2307391)
Curator: @Naa003
SciCrunch record: RRID:AB_2307391
Anti-FLAG M2 affinity gel
DOI: 10.7554/eLife.46417
Resource: (Sigma-Aldrich Cat# A2220, RRID:AB_10063035)
Curator: @Naa003
SciCrunch record: RRID:AB_10063035
MetaMorph
DOI: 10.7554/eLife.44502
Resource: MetaMorph Microscopy Automation and Image Analysis Software (RRID:SCR_002368)
Curator: @Naa003
SciCrunch record: RRID:SCR_002368
HMMER
DOI: 10.7554/eLife.49030
Resource: Hmmer (RRID:SCR_005305)
Curator: @Naa003
SciCrunch record: RRID:SCR_005305
Pfam
DOI: 10.7554/eLife.49030
Resource: Pfam (RRID:SCR_004726)
Curator: @Naa003
SciCrunch record: RRID:SCR_004726
Graphpad PRISM
DOI: 10.7554/eLife.49030
Resource: GraphPad Prism (RRID:SCR_002798)
Curator: @Naa003
SciCrunch record: RRID:SCR_002798
Ima ge J
DOI: 10.7554/eLife.49030
Resource: ImageJ (RRID:SCR_003070)
Curator: @Naa003
SciCrunch record: RRID:SCR_003070
PANTHER
DOI: 10.7554/eLife.46703
Resource: PANTHER (RRID:SCR_004869)
Curator: @Naa003
SciCrunch record: RRID:SCR_004869
DeSeq2
DOI: 10.7554/eLife.46703
Resource: DESeq2 (RRID:SCR_015687)
Curator: @Naa003
SciCrunch record: RRID:SCR_015687
MetaMorph
DOI: 10.7554/eLife.46703
Resource: MetaMorph Microscopy Automation and Image Analysis Software (RRID:SCR_002368)
Curator: @Naa003
SciCrunch record: RRID:SCR_002368
MATLAB
DOI: 10.7554/eLife.45257
Resource: MATLAB (RRID:SCR_001622)
Curator: @Naa003
SciCrunch record: RRID:SCR_001622
Fiji
DOI: 10.7554/eLife.45257
Resource: Fiji (RRID:SCR_002285)
Curator: @Naa003
SciCrunch record: RRID:SCR_002285
SerialEM
DOI: 10.7554/eLife.45257
Resource: SerialEM (RRID:SCR_017293)
Curator: @Naa003
SciCrunch record: RRID:SCR_017293
Illustrator
DOI: 10.7554/eLife.45977
Resource: Adobe Illustrator (RRID:SCR_010279)
Curator: @Naa003
SciCrunch record: RRID:SCR_010279
Adobe Photoshop
DOI: 10.7554/eLife.45977
Resource: Adobe Photoshop (RRID:SCR_014199)
Curator: @Naa003
SciCrunch record: RRID:SCR_014199
ImageJ
DOI: 10.7554/eLife.47550
Resource: ImageJ (RRID:SCR_003070)
Curator: @Naa003
SciCrunch record: RRID:SCR_003070
Adobe Photoshop
DOI: 10.7554/eLife.47550
Resource: Adobe Photoshop (RRID:SCR_014199)
Curator: @Naa003
SciCrunch record: RRID:SCR_014199
Psychophysics Toolbox
DOI: 10.7554/eLife.48214
Resource: Psychophysics Toolbox (RRID:SCR_002881)
Curator: @Naa003
SciCrunch record: RRID:SCR_002881
Statistica
DOI: 10.7554/eLife.46472
Resource: STATISTICA (RRID:SCR_014213)
Curator: @Naa003
SciCrunch record: RRID:SCR_014213
Prism
DOI: 10.7554/eLife.46912
Resource: GraphPad Prism (RRID:SCR_002798)
Curator: @Naa003
SciCrunch record: RRID:SCR_002798
Rabbit anti-Col1α1
DOI: 10.7554/eLife.47454
Resource: (Abcam Cat# ab64883, RRID:AB_1140613)
Curator: @Naa003
SciCrunch record: RRID:AB_1140613
Rabbit anti-Atf4
DOI: 10.7554/eLife.47454
Resource: (Cell Signaling Technology Cat# 11815, RRID:AB_2616025)
Curator: @Naa003
SciCrunch record: RRID:AB_2616025
Rabbit anti-Runx2
DOI: 10.7554/eLife.47454
Resource: (Cell Signaling Technology Cat# 12556, RRID:AB_2732805)
Curator: @Naa003
SciCrunch record: RRID:AB_2732805
Rabbit anti-Creb
DOI: 10.7554/eLife.47454
Resource: (Cell Signaling Technology Cat# 9197, RRID:AB_331277)
Curator: @Naa003
SciCrunch record: RRID:AB_331277
Rabbit anti-p-Creb
DOI: 10.7554/eLife.47454
Resource: (Cell Signaling Technology Cat# 9198, RRID:AB_2561044)
Curator: @Naa003
SciCrunch record: RRID:AB_2561044
Rabbit anti-CamkII
DOI: 10.7554/eLife.47454
Resource: (Cell Signaling Technology Cat# 4436, RRID:AB_10545451)
Curator: @Naa003
SciCrunch record: RRID:AB_10545451
Rabbit anti-p-CamkII
DOI: 10.7554/eLife.47454
Resource: (Cell Signaling Technology Cat# 12716, RRID:AB_2713889)
Curator: @Naa003
SciCrunch record: RRID:AB_2713889
Rabbit anti-Piezo1
DOI: 10.7554/eLife.47454
Resource: (Proteintech Cat# 15939-1-AP, RRID:AB_2231460)
Curator: @Naa003
SciCrunch record: RRID:AB_2231460