- Jul 2021
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elifesciences.org elifesciences.org
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WebGestalt
DOI: 10.7554/eLife.49044
Resource: WebGestalt: WEB-based GEne SeT AnaLysis Toolkit (RRID:SCR_006786)
Curator: @Naa003
SciCrunch record: RRID:SCR_006786
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TopHat
DOI: 10.7554/eLife.49044
Resource: TopHat (RRID:SCR_013035)
Curator: @Naa003
SciCrunch record: RRID:SCR_013035
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PANTHER
DOI: 10.7554/eLife.49044
Resource: PANTHER (RRID:SCR_004869)
Curator: @Naa003
SciCrunch record: RRID:SCR_004869
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DESeq2
DOI: 10.7554/eLife.49044
Resource: DESeq2 (RRID:SCR_015687)
Curator: @Naa003
SciCrunch record: RRID:SCR_015687
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STAR
DOI: 10.7554/eLife.49044
Resource: STAR (RRID:SCR_015899)
Curator: @Naa003
SciCrunch record: RRID:SCR_015899
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FastQC
DOI: 10.7554/eLife.49044
Resource: FastQC (RRID:SCR_014583)
Curator: @Naa003
SciCrunch record: RRID:SCR_014583
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bcl2fastq
DOI: 10.7554/eLife.49044
Resource: bcl2fastq (RRID:SCR_015058)
Curator: @Naa003
SciCrunch record: RRID:SCR_015058
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HRP-coupled goat polyclonal anti mouse IgG
DOI: 10.7554/eLife.49044
Resource: (Jackson ImmunoResearch Labs Cat# 115-035-146, RRID:AB_2307392)
Curator: @Naa003
SciCrunch record: RRID:AB_2307392
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HRP-coupled goat polylonal anti rabbit IgG
DOI: 10.7554/eLife.49044
Resource: (Jackson ImmunoResearch Labs Cat# 111-035-144, RRID:AB_2307391)
Curator: @Naa003
SciCrunch record: RRID:AB_2307391
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rabbit polyclonal anti-Caspase-7
DOI: 10.7554/eLife.49044
Resource: (Cell Signaling Technology Cat# 9492, RRID:AB_2228313)
Curator: @Naa003
SciCrunch record: RRID:AB_2228313
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rabbit polyclonal anti-Caspase-3
DOI: 10.7554/eLife.49044
Resource: (Cell Signaling Technology Cat# 9662, RRID:AB_331439)
Curator: @Naa003
SciCrunch record: RRID:AB_331439
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rabbit polyclonal anti-TDG
DOI: 10.7554/eLife.49044
Resource: (Active Motif Cat# 61437, RRID:AB_2793636)
Curator: @Naa003
SciCrunch record: RRID:AB_2793636
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rabbit polyclonal anti-histone H3 (Ser10)
DOI: 10.7554/eLife.49044
Resource: (Millipore Cat# 06-570, RRID:AB_310177)
Curator: @Naa003
SciCrunch record: RRID:AB_310177
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rabbit polyclonal anti-histone H3
DOI: 10.7554/eLife.49044
Resource: (Abcam Cat# ab1791, RRID:AB_302613)
Curator: @Naa003
SciCrunch record: RRID:AB_302613
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mouse monoclonal anti-p53 (X77)
DOI: 10.7554/eLife.49044
Resource: (Thermo Fisher Scientific Cat# MA1-12549, RRID:AB_1077421)
Curator: @Naa003
SciCrunch record: RRID:AB_1077421
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rabbit polyclonal anti-phospho-Chk1 (Ser345)
DOI: 10.7554/eLife.49044
Resource: (Cell Signaling Technology Cat# 2341, RRID:AB_330023)
Curator: @Naa003
SciCrunch record: RRID:AB_330023
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rabbit polyclonal anti-APE1
DOI: 10.7554/eLife.49044
Resource: (Abcam Cat# ab137708, RRID:AB_2732912)
Curator: @Naa003
SciCrunch record: RRID:AB_2732912
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rabbit polyclonal anti-NEIL2
DOI: 10.7554/eLife.49044
Resource: (Abcam Cat# ab124106, RRID:AB_10975153)
Curator: @Naa003
SciCrunch record: RRID:AB_10975153
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rabbit polyclonal anti-NEIL1
DOI: 10.7554/eLife.49044
Resource: (Abcam Cat# ab21337, RRID:AB_1952225)
Curator: @Naa003
SciCrunch record: RRID:AB_1952225
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mouse monoclonal anti-alpha tubulin
DOI: 10.7554/eLife.49044
Resource: (Sigma-Aldrich Cat# T5168, RRID:AB_477579)
Curator: @Naa003
SciCrunch record: RRID:AB_477579
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E14TG2a
DOI: 10.7554/eLife.49044
Resource: (ECACC Cat# 08021401, RRID:CVCL_9108)
Curator: @Naa003
SciCrunch record: RRID:CVCL_9108
Tags
- RRID:AB_2732912
- RRID:SCR_014583
- RRID:AB_2307392
- RRID:SCR_013035
- RRID:AB_10975153
- RRID:AB_2228313
- RRID:SCR_004869
- RRID:SCR_015899
- RRID:AB_2307391
- RRID:AB_331439
- RRID:AB_310177
- RRID:CVCL_9108
- RRID:SCR_015058
- RRID:AB_477579
- RRID:AB_330023
- RRID:AB_1077421
- RRID:AB_2793636
- RRID:SCR_006786
- RRID:AB_1952225
- RRID:SCR_015687
- RRID:AB_302613
- RRIDCUR:Missing
Annotators
URL
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www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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Pannoramic Viewer
DOI: 10.7554/eLife.46592
Resource: Pannoramic Viewer (RRID:SCR_014424)
Curator: @Naa003
SciCrunch record: RRID:SCR_014424
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elifesciences.org elifesciences.org
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GraphPad Prism
DOI: 10.7554/eLife.41239
Resource: GraphPad Prism (RRID:SCR_002798)
Curator: @Naa003
SciCrunch record: RRID:SCR_002798
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Xcalibur
DOI: 10.7554/eLife.41239
Resource: Thermo Xcalibur (RRID:SCR_014593)
Curator: @Naa003
SciCrunch record: RRID:SCR_014593
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FlowJo
DOI: 10.7554/eLife.41239
Resource: FlowJo (RRID:SCR_008520)
Curator: @Naa003
SciCrunch record: RRID:SCR_008520
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elifesciences.org elifesciences.org
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MATLAB
DOI: 10.7554/eLife.45909
Resource: MATLAB (RRID:SCR_001622)
Curator: @Naa003
SciCrunch record: RRID:SCR_001622
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Igor pro
DOI: 10.7554/eLife.45909
Resource: IGOR Pro (RRID:SCR_000325)
Curator: @Naa003
SciCrunch record: RRID:SCR_000325
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LabVIEW
DOI: 10.7554/eLife.45909
Resource: LabView (RRID:SCR_014325)
Curator: @Naa003
SciCrunch record: RRID:SCR_014325
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elifesciences.org elifesciences.org
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GUSSI
DOI: 10.7554/eLife.47650
Resource: GUSSI (RRID:SCR_014962)
Curator: @Naa003
SciCrunch record: RRID:SCR_014962
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μManager
DOI: 10.7554/eLife.47650
Resource: ?Manager (RRID:SCR_016865)
Curator: @Naa003
SciCrunch record: RRID:SCR_016865
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Fiji
DOI: 10.7554/eLife.47650
Resource: Fiji (RRID:SCR_002285)
Curator: @Naa003
SciCrunch record: RRID:SCR_002285
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Graphpad prism
DOI: 10.7554/eLife.47650
Resource: GraphPad Prism (RRID:SCR_002798)
Curator: @Naa003
SciCrunch record: RRID:SCR_002798
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Phenix.refine
DOI: 10.7554/eLife.47650
Resource: Phenix.refine (RRID:SCR_016736)
Curator: @Naa003
SciCrunch record: RRID:SCR_016736
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Coot
DOI: 10.7554/eLife.47650
Resource: Coot (RRID:SCR_014222)
Curator: @Naa003
SciCrunch record: RRID:SCR_014222
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RELION
DOI: 10.7554/eLife.47650
Resource: RELION (RRID:SCR_016274)
Curator: @Naa003
SciCrunch record: RRID:SCR_016274
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EMAN2
DOI: 10.7554/eLife.47650
Resource: EMAN (RRID:SCR_016867)
Curator: @Naa003
SciCrunch record: RRID:SCR_016867
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GCTF
DOI: 10.7554/eLife.47650
Resource: GCTF (RRID:SCR_016500)
Curator: @Naa003
SciCrunch record: RRID:SCR_016500
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Goat anti-Rabbit IgG H and L (Alexa Fluor 488)
DOI: 10.7554/eLife.47650
Resource: (Thermo Fisher Scientific Cat# A-11034, RRID:AB_2576217)
Curator: @Naa003
SciCrunch record: RRID:AB_2576217
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elifesciences.org elifesciences.org
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Bowtie
DOI: 10.7554/eLife.48469
Resource: Bowtie (RRID:SCR_005476)
Curator: @Naa003
SciCrunch record: RRID:SCR_005476
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FlowJo
DOI: 10.7554/eLife.48469
Resource: FlowJo (RRID:SCR_008520)
Curator: @Naa003
SciCrunch record: RRID:SCR_008520
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Prism
DOI: 10.7554/eLife.48469
Resource: GraphPad Prism (RRID:SCR_002798)
Curator: @Naa003
SciCrunch record: RRID:SCR_002798
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FLAG (mouse, monoclonal)
DOI: 10.7554/eLife.48469
Resource: (Sigma-Aldrich Cat# F1804, RRID:AB_262044)
Curator: @Naa003
SciCrunch record: RRID:AB_262044
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GFP (rabbit, polyclonal)
DOI: 10.7554/eLife.48469
Resource: (GeneTex Cat# GTX113617, RRID:AB_1950371)
Curator: @Naa003
SciCrunch record: RRID:AB_1950371
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Dengue virus NS4B protein (rabbit, polyclonal)
DOI: 10.7554/eLife.48469
Resource: (GeneTex Cat# GTX124250, RRID:AB_11176998)
Curator: @Naa003
SciCrunch record: RRID:AB_11176998
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Dengue virus NS3 protein (mouse, monoclonal)
DOI: 10.7554/eLife.48469
Resource: (GeneTex Cat# GTX629477, RRID:AB_2801283)
Curator: @Naa003
SciCrunch record: RRID:AB_2801283
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Dengue virus NS2B (rabbit, polyclonal)
DOI: 10.7554/eLife.48469
Resource: (GeneTex Cat# GTX124246, RRID:AB_11170698)
Curator: @Naa003
SciCrunch record: RRID:AB_11170698
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Dengue virus capsid protein (rabbit, polyclonal)
DOI: 10.7554/eLife.48469
Resource: (GeneTex Cat# GTX103343, RRID:AB_1240697)
Curator: @Naa003
SciCrunch record: RRID:AB_1240697
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EMC2/TTC35 (rabbit, polyclonal)
DOI: 10.7554/eLife.48469
Resource: (Proteintech Cat# 25443-1-AP, RRID:AB_2750836)
Curator: @Naa003
SciCrunch record: RRID:AB_2750836
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GAPDH (mouse, monoclonal)
DOI: 10.7554/eLife.48469
Resource: (Santa Cruz Biotechnology Cat# sc-32233, RRID:AB_627679)
Curator: @Naa003
SciCrunch record: RRID:AB_627679
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P84 (mouse, monoclonal)
DOI: 10.7554/eLife.48469
Resource: (GeneTex Cat# GTX70220, RRID:AB_372637)
Curator: @Naa003
SciCrunch record: RRID:AB_372637
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elifesciences.org elifesciences.org
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GraphPad Prism
DOI: 10.7554/eLife.46089
Resource: GraphPad Prism (RRID:SCR_002798)
Curator: @Naa003
SciCrunch record: RRID:SCR_002798
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Fiji
DOI: 10.7554/eLife.46089
Resource: Fiji (RRID:SCR_002285)
Curator: @Naa003
SciCrunch record: RRID:SCR_002285
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Illustrator
DOI: 10.7554/eLife.46089
Resource: Adobe Illustrator (RRID:SCR_010279)
Curator: @Naa003
SciCrunch record: RRID:SCR_010279
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ImageJ
DOI: 10.7554/eLife.46089
Resource: ImageJ (RRID:SCR_003070)
Curator: @Naa003
SciCrunch record: RRID:SCR_003070
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elifesciences.org elifesciences.org
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BWA
DOI: 10.7554/eLife.48220
Resource: BWA (RRID:SCR_010910)
Curator: @Naa003
SciCrunch record: RRID:SCR_010910
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vcftools
DOI: 10.7554/eLife.48220
Resource: VCFtools (RRID:SCR_001235)
Curator: @Naa003
SciCrunch record: RRID:SCR_001235
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-
elifesciences.org elifesciences.org
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GraphPad Prism
DOI: 10.7554/eLife.47972
Resource: GraphPad Prism (RRID:SCR_002798)
Curator: @Naa003
SciCrunch record: RRID:SCR_002798
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AxoGraph
DOI: 10.7554/eLife.47972
Resource: Axograph (RRID:SCR_014284)
Curator: @Naa003
SciCrunch record: RRID:SCR_014284
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ImageJ
DOI: 10.7554/eLife.47972
Resource: ImageJ (RRID:SCR_003070)
Curator: @Naa003
SciCrunch record: RRID:SCR_003070
-
Fiji
DOI: 10.7554/eLife.47972
Resource: Fiji (RRID:SCR_002285)
Curator: @Naa003
SciCrunch record: RRID:SCR_002285
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-
elifesciences.org elifesciences.org
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Xcalibur
DOI: 10.7554/eLife.47990
Resource: Thermo Xcalibur (RRID:SCR_014593)
Curator: @Naa003
SciCrunch record: RRID:SCR_014593
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MassHunter
DOI: 10.7554/eLife.47990
Resource: Agilent Masshunter Quantitative Analysis software (RRID:SCR_015040)
Curator: @Naa003
SciCrunch record: RRID:SCR_015040
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-
elifesciences.org elifesciences.org
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mouse monoclonal) anti-FLAG
DOI: 10.7554/eLife.48119
Resource: (Sigma-Aldrich Cat# F3165, RRID:AB_259529)
Curator: @Naa003
SciCrunch record: RRID:AB_259529
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mouse monoclonal) anti-DYKDDDDK
DOI: 10.7554/eLife.48119
Resource: (Thermo Fisher Scientific Cat# MA1-91878, RRID:AB_1957945)
Curator: @Naa003
SciCrunch record: RRID:AB_1957945
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mouse monoclonal) anti-HA
DOI: 10.7554/eLife.48119
Resource: (Thermo Fisher Scientific Cat# 32-6700, RRID:AB_2533092)
Curator: @Naa003
SciCrunch record: RRID:AB_2533092
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A549
DOI: 10.7554/eLife.48119
Resource: (CCLV Cat# CCLV-RIE 1035, RRID:CVCL_0023)
Curator: @Naa003
SciCrunch record: RRID:CVCL_0023
-
Hela
DOI: 10.7554/eLife.48119
Resource: (BCRC Cat# 60005, RRID:CVCL_0030)
Curator: @Naa003
SciCrunch record: RRID:CVCL_0030
-
MDA-MB-231
DOI: 10.7554/eLife.48119
Resource: (ATCC Cat# CRM-HTB-26, RRID:CVCL_0062)
Curator: @Naa003
SciCrunch record: RRID:CVCL_0062
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MCF-7
DOI: 10.7554/eLife.48119
Resource: (NCI-DTP Cat# MCF7, RRID:CVCL_0031)
Curator: @Naa003
SciCrunch record: RRID:CVCL_0031
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Colo-205
DOI: 10.7554/eLife.48119
Resource: (RCB Cat# RCB2127, RRID:CVCL_0218)
Curator: @Naa003
SciCrunch record: RRID:CVCL_0218
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elifesciences.org elifesciences.org
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Origin
DOI: 10.7554/eLife.47804
Resource: Origin (RRID:SCR_014212)
Curator: @Naa003
SciCrunch record: RRID:SCR_014212
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Origin
DOI: 10.7554/eLife.47804
Resource: Origin (RRID:SCR_014212)
Curator: @Naa003
SciCrunch record: RRID:SCR_014212
Tags
Annotators
URL
-
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elifesciences.org elifesciences.org
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Imaris
DOI: 10.7554/eLife.47460
Resource: Imaris (RRID:SCR_007370)
Curator: @Naa003
SciCrunch record: RRID:SCR_007370
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Adobe Photoshop
DOI: 10.7554/eLife.47460
Resource: Adobe Photoshop (RRID:SCR_014199)
Curator: @Naa003
SciCrunch record: RRID:SCR_014199
-
Leica Application Suite
DOI: 10.7554/eLife.47460
Resource: Leica Application Suite (RRID:SCR_016555)
Curator: @Naa003
SciCrunch record: RRID:SCR_016555
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ZEN
DOI: 10.7554/eLife.47460
Resource: ZEN Digital Imaging for Light Microscopy (RRID:SCR_013672)
Curator: @Naa003
SciCrunch record: RRID:SCR_013672
-
R
DOI: 10.7554/eLife.47460
Resource: R Project for Statistical Computing (RRID:SCR_001905)
Curator: @Naa003
SciCrunch record: RRID:SCR_001905
-
ggplot2
DOI: 10.7554/eLife.47460
Resource: ggplot2 (RRID:SCR_014601)
Curator: @Naa003
SciCrunch record: RRID:SCR_014601
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pheatmap
DOI: 10.7554/eLife.47460
Resource: pheatmap (RRID:SCR_016418)
Curator: @Naa003
SciCrunch record: RRID:SCR_016418
-
Fiji
DOI: 10.7554/eLife.47460
Resource: Fiji (RRID:SCR_002285)
Curator: @Naa003
SciCrunch record: RRID:SCR_002285
-
-
elifesciences.org elifesciences.org
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SPSS
DOI: 10.7554/eLife.43243
Resource: SPSS (RRID:SCR_002865)
Curator: @Naa003
SciCrunch record: RRID:SCR_002865
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Excel
DOI: 10.7554/eLife.43243
Resource: Microsoft Excel (RRID:SCR_016137)
Curator: @Naa003
SciCrunch record: RRID:SCR_016137
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MATLAB
DOI: 10.7554/eLife.43243
Resource: MATLAB (RRID:SCR_001622)
Curator: @Naa003
SciCrunch record: RRID:SCR_001622
-
Prism
DOI: 10.7554/eLife.43243
Resource: GraphPad Prism (RRID:SCR_002798)
Curator: @Naa003
SciCrunch record: RRID:SCR_002798
-
NeuroMatic
DOI: 10.7554/eLife.43243
Resource: NeuroMatic (RRID:SCR_004186)
Curator: @Naa003
SciCrunch record: RRID:SCR_004186
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IGOR Pro
DOI: 10.7554/eLife.43243
Resource: IGOR Pro (RRID:SCR_000325)
Curator: @Naa003
SciCrunch record: RRID:SCR_000325
-
-
elifesciences.org elifesciences.org
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GraphPad Prism
DOI: 10.7554/eLife.48834
Resource: GraphPad Prism (RRID:SCR_002798)
Curator: @Naa003
SciCrunch record: RRID:SCR_002798
-
R
DOI: 10.7554/eLife.48834
Resource: R Project for Statistical Computing (RRID:SCR_001905)
Curator: @Naa003
SciCrunch record: RRID:SCR_001905
-
ImageJ
DOI: 10.7554/eLife.48834
Resource: ImageJ (RRID:SCR_003070)
Curator: @Naa003
SciCrunch record: RRID:SCR_003070
-
Photoshop
DOI: 10.7554/eLife.48834
Resource: Adobe Photoshop (RRID:SCR_014199)
Curator: @Naa003
SciCrunch record: RRID:SCR_014199
-
FIJI
DOI: 10.7554/eLife.48834
Resource: Fiji (RRID:SCR_002285)
Curator: @Naa003
SciCrunch record: RRID:SCR_002285
-
FITC-conjugated anti-rabbit IgG
DOI: 10.7554/eLife.48834
Resource: (Jackson ImmunoResearch Labs Cat# 111-095-003, RRID:AB_2337972)
Curator: @Naa003
SciCrunch record: RRID:AB_2337972
-
AlexaFluor 647-conjugated anti-mouse IgG
DOI: 10.7554/eLife.48834
Resource: (Molecular Probes Cat# A-31571, RRID:AB_162542)
Curator: @Naa003
SciCrunch record: RRID:AB_162542
-
AlexaFluor 647-conjugated anti-rabbit IgG
DOI: 10.7554/eLife.48834
Resource: (Thermo Fisher Scientific Cat# A-31573, RRID:AB_2536183)
Curator: @Naa003
SciCrunch record: RRID:AB_2536183
-
AlexaFluor 488-conjugated anti-rabbit IgG
DOI: 10.7554/eLife.48834
Resource: (Thermo Fisher Scientific Cat# A-11008, RRID:AB_143165)
Curator: @Naa003
SciCrunch record: RRID:AB_143165
-
AlexaFluor 488-conjugated anti-goat IgG
DOI: 10.7554/eLife.48834
Resource: (Thermo Fisher Scientific Cat# A-11055, RRID:AB_2534102)
Curator: @Naa003
SciCrunch record: RRID:AB_2534102
-
anti-rabbit
DOI: 10.7554/eLife.48834
Resource: (Jackson ImmunoResearch Labs Cat# 111-035-144, RRID:AB_2307391)
Curator: @Naa003
SciCrunch record: RRID:AB_2307391
-
anti-mouse
DOI: 10.7554/eLife.48834
Resource: (Yeasen Biotech Cat# 33201ES60, RRID:AB_10015289)
Curator: @Naa003
SciCrunch record: RRID:AB_10015289
-
Anti-goat
DOI: 10.7554/eLife.48834
Resource: (Jackson ImmunoResearch Labs Cat# 305-035-003, RRID:AB_2339400)
Curator: @Naa003
SciCrunch record: RRID:AB_2339400
-
anti-APOA-I (rabbit polyclonal)
DOI: 10.7554/eLife.48834
Resource: (Abcam Cat# ab64308, RRID:AB_1309957)
Curator: @Naa003
SciCrunch record: RRID:AB_1309957
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-
elifesciences.org elifesciences.org
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UCSF Chimera
DOI: 10.7554/eLife.46845
Resource: UCSF Chimera (RRID:SCR_004097)
Curator: @Naa003
SciCrunch record: RRID:SCR_004097
-
Gctf
DOI: 10.7554/eLife.46845
Resource: GCTF (RRID:SCR_016500)
Curator: @Naa003
SciCrunch record: RRID:SCR_016500
-
Fiji
DOI: 10.7554/eLife.46845
Resource: Fiji (RRID:SCR_002285)
Curator: @Naa003
SciCrunch record: RRID:SCR_002285
-
IMOD
DOI: 10.7554/eLife.46845
Resource: IMOD (RRID:SCR_003297)
Curator: @Naa003
SciCrunch record: RRID:SCR_003297
-
SerialEM
DOI: 10.7554/eLife.46845
Resource: SerialEM (RRID:SCR_017293)
Curator: @Naa003
SciCrunch record: RRID:SCR_017293
-
-
elifesciences.org elifesciences.org
-
GraphPad Prism
DOI: 10.7554/eLife.50231
Resource: GraphPad Prism (RRID:SCR_002798)
Curator: @Naa003
SciCrunch record: RRID:SCR_002798
-
Enrichr
DOI: 10.7554/eLife.50231
Resource: Enrichr (RRID:SCR_001575)
Curator: @Naa003
SciCrunch record: RRID:SCR_001575
-
ImageJ
DOI: 10.7554/eLife.50231
Resource: ImageJ (RRID:SCR_003070)
Curator: @Naa003
SciCrunch record: RRID:SCR_003070
-
-
elifesciences.org elifesciences.org
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pGEM-3z/601
DOI: 10.7554/eLife.48281
Resource: RRID:Addgene_26656
Curator: @Naa003
SciCrunch record: RRID:Addgene_26656
-
-
elifesciences.org elifesciences.org
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Matlab
DOI: 10.7554/eLife.46675
Resource: MATLAB (RRID:SCR_001622)
Curator: @Naa003
SciCrunch record: RRID:SCR_001622
-
StereoInvestigator
DOI: 10.7554/eLife.46675
Resource: Stereo Investigator (RRID:SCR_002526)
Curator: @Naa003
SciCrunch record: RRID:SCR_002526
-
Photoshop
DOI: 10.7554/eLife.46675
Resource: Adobe Photoshop (RRID:SCR_014199)
Curator: @Naa003
SciCrunch record: RRID:SCR_014199
-
ImageJ
DOI: 10.7554/eLife.46675
Resource: ImageJ (RRID:SCR_003070)
Curator: @Naa003
SciCrunch record: RRID:SCR_003070
-
-
elifesciences.org elifesciences.org
-
Offline Sorter
DOI: 10.7554/eLife.49995
Resource: Offline Sorter (RRID:SCR_000012)
Curator: @Naa003
SciCrunch record: RRID:SCR_000012
-
pClamp
DOI: 10.7554/eLife.49995
Resource: pClamp (RRID:SCR_011323)
Curator: @Naa003
SciCrunch record: RRID:SCR_011323
-
ZEN
DOI: 10.7554/eLife.49995
Resource: ZEN Digital Imaging for Light Microscopy (RRID:SCR_013672)
Curator: @Naa003
SciCrunch record: RRID:SCR_013672
-
ImageJ
DOI: 10.7554/eLife.49995
Resource: ImageJ (RRID:SCR_003070)
Curator: @Naa003
SciCrunch record: RRID:SCR_003070
-
CorelDRAW
DOI: 10.7554/eLife.49995
Resource: CorelDRAW Graphics Suite (RRID:SCR_014235)
Curator: @Naa003
SciCrunch record: RRID:SCR_014235
-
Neurolucida
DOI: 10.7554/eLife.49995
Resource: Neurolucida (RRID:SCR_001775)
Curator: @Naa003
SciCrunch record: RRID:SCR_001775
-
Prism
DOI: 10.7554/eLife.49995
Resource: GraphPad Prism (RRID:SCR_002798)
Curator: @Naa003
SciCrunch record: RRID:SCR_002798
-
Matlab
DOI: 10.7554/eLife.49995
Resource: MATLAB (RRID:SCR_001622)
Curator: @Naa003
SciCrunch record: RRID:SCR_001622
-
anti-chicken Alexa Fluor 488 (host: donkey, polyclonal)
DOI: 10.7554/eLife.49995
Resource: (Jackson ImmunoResearch Labs Cat# 703-545-155, RRID:AB_2340375)
Curator: @Naa003
SciCrunch record: RRID:AB_2340375
-
anti-rabbit Cy5 (host: donkey, polyclonal)
DOI: 10.7554/eLife.49995
Resource: (Jackson ImmunoResearch Labs Cat# 711-175-152, RRID:AB_2340607)
Curator: @Naa003
SciCrunch record: RRID:AB_2340607
-
anti-rabbit Cy3 (host: donkey, polyclonal)
DOI: 10.7554/eLife.49995
Resource: (Jackson ImmunoResearch Labs Cat# 711-165-152, RRID:AB_2307443)
Curator: @Naa003
SciCrunch record: RRID:AB_2307443
-
anti-rabbit Alexa Fluor 488 (host: donkey, polyclonal)
DOI: 10.7554/eLife.49995
Resource: (Jackson ImmunoResearch Labs Cat# 711-545-152, RRID:AB_2313584)
Curator: @Naa003
SciCrunch record: RRID:AB_2313584
-
anti-mouse Cy5 (host: donkey, polyclonal)
DOI: 10.7554/eLife.49995
Resource: (Jackson ImmunoResearch Labs Cat# 715-175-151, RRID:AB_2340820)
Curator: @Naa003
SciCrunch record: RRID:AB_2340820
-
anti-mouse Cy3 (host: donkey, polyclonal)
DOI: 10.7554/eLife.49995
Resource: (Jackson ImmunoResearch Labs Cat# 715-165-151, RRID:AB_2315777)
Curator: @Naa003
SciCrunch record: RRID:AB_2315777
-
anti-mouse Alexa Fluor 488 (host: donkey, polyclonal)
DOI: 10.7554/eLife.49995
Resource: (Jackson ImmunoResearch Labs Cat# 715-545-151, RRID:AB_2341099)
Curator: @Naa003
SciCrunch record: RRID:AB_2341099
-
anti-substance P mouse monoclonal antibody
DOI: 10.7554/eLife.49995
Resource: (Abcam Cat# ab14184, RRID:AB_300971)
Curator: @Naa003
SciCrunch record: RRID:AB_300971
-
anti-GFP chicken polyclonal antibody
DOI: 10.7554/eLife.49995
Resource: (Novus Cat# NB100-1614, RRID:AB_10001164)
Curator: @Naa003
SciCrunch record: RRID:AB_10001164
-
anti-NeuN rabbit polyclonal antibody
DOI: 10.7554/eLife.49995
Resource: (Abcam Cat# ab104225, RRID:AB_10711153)
Curator: @Naa003
SciCrunch record: RRID:AB_10711153
-
anti-tyrosine hydroxylase (TH) mouse monoclonal antibody
DOI: 10.7554/eLife.49995
Resource: (Millipore Cat# MAB318, RRID:AB_2201528)
Curator: @Naa003
SciCrunch record: RRID:AB_2201528
Tags
- RRID:AB_2201528
- RRID:SCR_002798
- RRID:SCR_001622
- RRID:AB_2341099
- RRID:AB_2340375
- RRID:AB_2340820
- RRID:AB_2340607
- RRID:SCR_003070
- RRID:AB_300971
- RRID:SCR_014235
- RRID:SCR_000012
- RRID:AB_2307443
- RRID:SCR_013672
- RRID:AB_10001164
- RRID:SCR_011323
- RRID:SCR_001775
- RRID:AB_2313584
- RRID:AB_10711153
- RRID:AB_2315777
- RRIDCUR:Missing
Annotators
URL
-
-
elifesciences.org elifesciences.org
-
Primer-BLAST
DOI: 10.7554/eLife.42951
Resource: Primer-BLAST (RRID:SCR_003095)
Curator: @Naa003
SciCrunch record: RRID:SCR_003095
-
β-actin, mouse monoclonal
DOI: 10.7554/eLife.42951
Resource: (Santa Cruz Biotechnology Cat# sc-47778 HRP, RRID:AB_2714189)
Curator: @Naa003
SciCrunch record: RRID:AB_2714189
-
NFκB p65, rabbit polyclonal
DOI: 10.7554/eLife.42951
Resource: (Cell Signaling Technology Cat# 3034, RRID:AB_330561)
Curator: @Naa003
SciCrunch record: RRID:AB_330561
-
Phospho-NFκB p65 (Ser536), rabbit monoclonal
DOI: 10.7554/eLife.42951
Resource: (Cell Signaling Technology Cat# 3033, RRID:AB_331284)
Curator: @Naa003
SciCrunch record: RRID:AB_331284
-
ERK1/2, rabbit polyclonal
DOI: 10.7554/eLife.42951
Resource: (Cell Signaling Technology Cat# 9102, RRID:AB_330744)
Curator: @Naa003
SciCrunch record: RRID:AB_330744
-
Phospho-p44/42 MAPK (Erk1/2) (Thr202/Tyr204) (D13.14.4E) XP Rabbit mAb
DOI: 10.7554/eLife.42951
Resource: (Cell Signaling Technology Cat# 4370, RRID:AB_2315112)
Curator: @Naa003
SciCrunch record: RRID:AB_2315112
-
p38, rabbit polyclonal
DOI: 10.7554/eLife.42951
Resource: (Cell Signaling Technology Cat# 9212, RRID:AB_330713)
Curator: @Naa003
SciCrunch record: RRID:AB_330713
-
Phospho-p38 (Thr180/Tyr182), rabbit polyclonal
DOI: 10.7554/eLife.42951
Resource: (Cell Signaling Technology Cat# 9211, RRID:AB_331641)
Curator: @Naa003
SciCrunch record: RRID:AB_331641
-
Keap1 (E-20), goat polyclonal
DOI: 10.7554/eLife.42951
Resource: (Santa Cruz Biotechnology Cat# sc-15246, RRID:AB_2132638)
Curator: @Naa003
SciCrunch record: RRID:AB_2132638
-
Nrf2 (C-20), rabbit polyclonal
DOI: 10.7554/eLife.42951
Resource: (Santa Cruz Biotechnology Cat# sc-722, RRID:AB_2108502)
Curator: @Naa003
SciCrunch record: RRID:AB_2108502
-
Nrf2 (H-300), rabbit polyclonal
DOI: 10.7554/eLife.42951
Resource: (Santa Cruz Biotechnology Cat# sc-13032, RRID:AB_2263168)
Curator: @Naa003
SciCrunch record: RRID:AB_2263168
-
RAW264.7
DOI: 10.7554/eLife.42951
Resource: (ATCC Cat# TIB-71, RRID:CVCL_0493)
Curator: @Naa003
SciCrunch record: RRID:CVCL_0493
-
LyzMCre
DOI: 10.7554/eLife.42951
Resource: (IMSR Cat# JAX_018956,RRID:IMSR_JAX:018956)
Curator: @Naa003
SciCrunch record: RRID:IMSR_JAX:018956
-
-
elifesciences.org elifesciences.org
-
Fasttree
DOI: 10.7554/eLife.49662
Resource: FastTree (RRID:SCR_015501)
Curator: @Naa003
SciCrunch record: RRID:SCR_015501
-
Trinity
DOI: 10.7554/eLife.49662
Resource: Trinity (RRID:SCR_013048)
Curator: @Naa003
SciCrunch record: RRID:SCR_013048
-
cutadapt
DOI: 10.7554/eLife.49662
Resource: cutadapt (RRID:SCR_011841)
Curator: @Naa003
SciCrunch record: RRID:SCR_011841
-
-
elifesciences.org elifesciences.org
-
Photoshop
DOI: 10.7554/eLife.47327
Resource: Adobe Photoshop (RRID:SCR_014199)
Curator: @Naa003
SciCrunch record: RRID:SCR_014199
-
Slidebook
DOI: 10.7554/eLife.47327
Resource: SlideBook (RRID:SCR_014300)
Curator: @Naa003
SciCrunch record: RRID:SCR_014300
-
Image Scope
DOI: 10.7554/eLife.47327
Resource: ImageScope (RRID:SCR_014311)
Curator: @Naa003
SciCrunch record: RRID:SCR_014311
-
UniProtKB
DOI: 10.7554/eLife.47327
Resource: UniProtKB (RRID:SCR_004426)
Curator: @Naa003
SciCrunch record: RRID:SCR_004426
-
MaxQuant
DOI: 10.7554/eLife.47327
Resource: MaxQuant (RRID:SCR_014485)
Curator: @Naa003
SciCrunch record: RRID:SCR_014485
-
Gene Set Enrichment Analysis
DOI: 10.7554/eLife.47327
Resource: Gene Set Enrichment Analysis (RRID:SCR_003199)
Curator: @Naa003
SciCrunch record: RRID:SCR_003199
-
DESeq2
DOI: 10.7554/eLife.47327
Resource: DESeq2 (RRID:SCR_015687)
Curator: @Naa003
SciCrunch record: RRID:SCR_015687
-
ClusterProfiler
DOI: 10.7554/eLife.47327
Resource: clusterProfiler (RRID:SCR_016884)
Curator: @Naa003
SciCrunch record: RRID:SCR_016884
-
TopHat2
DOI: 10.7554/eLife.47327
Resource: TopHat (RRID:SCR_013035)
Curator: @Naa003
SciCrunch record: RRID:SCR_013035
-
Integrative Genomics Viewer
DOI: 10.7554/eLife.47327
Resource: Integrative Genomics Viewer (RRID:SCR_011793)
Curator: @Naa003
SciCrunch record: RRID:SCR_011793
-
ANNOVAR
DOI: 10.7554/eLife.47327
Resource: ANNOVAR (RRID:SCR_012821)
Curator: @Naa003
SciCrunch record: RRID:SCR_012821
-
SAMtools
DOI: 10.7554/eLife.47327
Resource: Samtools (RRID:SCR_002105)
Curator: @Naa003
SciCrunch record: RRID:SCR_002105
-
GATK
DOI: 10.7554/eLife.47327
Resource: GATK (RRID:SCR_001876)
Curator: @Naa003
SciCrunch record: RRID:SCR_001876
-
BWA MEM
DOI: 10.7554/eLife.47327
Resource: BWA (RRID:SCR_010910)
Curator: @Naa003
SciCrunch record: RRID:SCR_010910
-
Prism
DOI: 10.7554/eLife.47327
Resource: GraphPad Prism (RRID:SCR_002798)
Curator: @Naa003
SciCrunch record: RRID:SCR_002798
-
CellQuest Pro
DOI: 10.7554/eLife.47327
Resource: BD CellQuest Pro (RRID:SCR_014489)
Curator: @Naa003
SciCrunch record: RRID:SCR_014489
-
ModFit LT
DOI: 10.7554/eLife.47327
Resource: ModFit LT (RRID:SCR_016106)
Curator: @Naa003
SciCrunch record: RRID:SCR_016106
-
FlowJo
DOI: 10.7554/eLife.47327
Resource: FlowJo (RRID:SCR_008520)
Curator: @Naa003
SciCrunch record: RRID:SCR_008520
-
Image J
DOI: 10.7554/eLife.47327
Resource: ImageJ (RRID:SCR_003070)
Curator: @Naa003
SciCrunch record: RRID:SCR_003070
Tags
- RRID:SCR_014311
- RRID:SCR_004426
- RRID:SCR_002798
- RRID:SCR_013035
- RRID:SCR_016884
- RRID:SCR_014199
- RRID:SCR_012821
- RRID:SCR_008520
- RRID:SCR_001876
- RRID:SCR_003070
- RRID:SCR_016106
- RRID:SCR_003199
- RRID:SCR_010910
- RRID:SCR_002105
- RRID:SCR_014300
- RRID:SCR_015687
- RRID:SCR_014489
- RRID:SCR_014485
- RRIDCUR:Missing
- RRID:SCR_011793
Annotators
URL
-
-
elifesciences.org elifesciences.org
-
R
DOI: 10.7554/eLife.47929
Resource: R Project for Statistical Computing (RRID:SCR_001905)
Curator: @Naa003
SciCrunch record: RRID:SCR_001905
-
FIJI
DOI: 10.7554/eLife.47929
Resource: Fiji (RRID:SCR_002285)
Curator: @Naa003
SciCrunch record: RRID:SCR_002285
-
Wnt1-Cre; ZsGreenfl/fl
DOI: 10.7554/eLife.47929
Resource: (IMSR Cat# JAX_003829,RRID:IMSR_JAX:003829)
Curator: @Naa003
SciCrunch record: RRID:IMSR_JAX:003829
-
Mouse monoclonal anti-NH2 terminal synthetic decapeptide of alphasmooth muscle actin, IgG2a
DOI: 10.7554/eLife.47929
Resource: (Sigma-Aldrich Cat# A5228, RRID:AB_262054)
Curator: @Naa003
SciCrunch record: RRID:AB_262054
-
Mouse monoclonal anti-human phospho-histone H3, IgG1
DOI: 10.7554/eLife.47929
Resource: (Abcam Cat# ab14955, RRID:AB_443110)
Curator: @Naa003
SciCrunch record: RRID:AB_443110
-
Rabbit polyclonal anti-human Caspase 3, IgG
DOI: 10.7554/eLife.47929
Resource: (R and D Systems Cat# AF835, RRID:AB_2243952)
Curator: @Naa003
SciCrunch record: RRID:AB_2243952
-
Goat polyclonal anti -GFP, IgG
DOI: 10.7554/eLife.47929
Resource: (Abcam Cat# ab6673, RRID:AB_305643)
Curator: @Naa003
SciCrunch record: RRID:AB_305643
-
-
elifesciences.org elifesciences.org
-
mouse anti-syntaxin
DOI: 10.7554/eLife.46112
Resource: (DSHB Cat# 8c3, RRID:AB_528484)
Curator: @Naa003
SciCrunch record: RRID:AB_528484
-
mouse anti-αα<math id="inf307"><mi>α</mi></math>-synuclein
DOI: 10.7554/eLife.46112
Resource: (Abcam Cat# ab3309, RRID:AB_303693)
Curator: @Naa003
SciCrunch record: RRID:AB_303693
-
anti-mouse IgG
DOI: 10.7554/eLife.46112
Resource: (GE Healthcare Cat# NXA931, RRID:AB_772209)
Curator: @Naa003
SciCrunch record: RRID:AB_772209
-
mouse anti-beta-tubulin
DOI: 10.7554/eLife.46112
Resource: (DSHB Cat# E7, RRID:AB_528499)
Curator: @Naa003
SciCrunch record: RRID:AB_528499
-
rabbit anti-αα<math id="inf288"><mi>α</mi></math>-synuclein
DOI: 10.7554/eLife.46112
Resource: (Cell Signaling Technology Cat# 2642, RRID:AB_2192679)
Curator: @Naa003
SciCrunch record: RRID:AB_2192679
-
MicroCal Origin
DOI: 10.7554/eLife.46112
Resource: Microcal Origin (RRID:SCR_002815)
Curator: @Naa003
SciCrunch record: RRID:SCR_002815
-
-
elifesciences.org elifesciences.org
-
Bowtie
DOI: 10.7554/eLife.46007
Resource: Bowtie (RRID:SCR_005476)
Curator: @Naa003
SciCrunch record: RRID:SCR_005476
Tags
Annotators
URL
-
-
elifesciences.org elifesciences.org
-
STATISTICA
DOI: 10.7554/eLife.46356
Resource: STATISTICA (RRID:SCR_014213)
Curator: @Naa003
SciCrunch record: RRID:SCR_014213
-
Reconstruct
DOI: 10.7554/eLife.46356
Resource: Synapse Web Reconstruct (RRID:SCR_002716)
Curator: @Naa003
SciCrunch record: RRID:SCR_002716
-
Igor Pro
DOI: 10.7554/eLife.46356
Resource: IGOR Pro (RRID:SCR_000325)
Curator: @Naa003
SciCrunch record: RRID:SCR_000325
-
-
elifesciences.org elifesciences.org
-
IMOD
DOI: 10.7554/eLife.47156
Resource: IMOD (RRID:SCR_003297)
Curator: @Naa003
SciCrunch record: RRID:SCR_003297
Tags
Annotators
URL
-
-
elifesciences.org elifesciences.org
-
Graphpad Prism
DOI: 10.7554/eLife.49158
Resource: GraphPad Prism (RRID:SCR_002798)
Curator: @Naa003
SciCrunch record: RRID:SCR_002798
-
clusterProfiler
DOI: 10.7554/eLife.49158
Resource: clusterProfiler (RRID:SCR_016884)
Curator: @Naa003
SciCrunch record: RRID:SCR_016884
-
STAR
DOI: 10.7554/eLife.49158
Resource: STAR (RRID:SCR_015899)
Curator: @Naa003
SciCrunch record: RRID:SCR_015899
-
Salmon
DOI: 10.7554/eLife.49158
Resource: Salmon (RRID:SCR_017036)
Curator: @Naa003
SciCrunch record: RRID:SCR_017036
-
FastQC
DOI: 10.7554/eLife.49158
Resource: FastQC (RRID:SCR_014583)
Curator: @Naa003
SciCrunch record: RRID:SCR_014583
-
FIJI
DOI: 10.7554/eLife.49158
Resource: Fiji (RRID:SCR_002285)
Curator: @Naa003
SciCrunch record: RRID:SCR_002285
-
-
elifesciences.org elifesciences.org
-
FlowJo
DOI: 10.7554/eLife.47084
Resource: FlowJo (RRID:SCR_008520)
Curator: @Naa003
SciCrunch record: RRID:SCR_008520
-
ImageJ
DOI: 10.7554/eLife.47084
Resource: ImageJ (RRID:SCR_003070)
Curator: @Naa003
SciCrunch record: RRID:SCR_003070
-
Prism
DOI: 10.7554/eLife.47084
Resource: GraphPad Prism (RRID:SCR_002798)
Curator: @Naa003
SciCrunch record: RRID:SCR_002798
-
Anti-rabbit IgG HRP
DOI: 10.7554/eLife.47084
Resource: (Jackson ImmunoResearch Labs Cat# 711-035-152, RRID:AB_10015282)
Curator: @Naa003
SciCrunch record: RRID:AB_10015282
-
Calnexin
DOI: 10.7554/eLife.47084
Resource: (Abcam Cat# ab22595, RRID:AB_2069006)
Curator: @Naa003
SciCrunch record: RRID:AB_2069006
-
Flag
DOI: 10.7554/eLife.47084
Resource: (Sigma-Aldrich Cat# F1804, RRID:AB_262044)
Curator: @Naa003
SciCrunch record: RRID:AB_262044
-
CHOP
DOI: 10.7554/eLife.47084
Resource: (Cell Signaling Technology Cat# 2895, RRID:AB_2089254)
Curator: @Naa003
SciCrunch record: RRID:AB_2089254
-
Cleaved caspase-3
DOI: 10.7554/eLife.47084
Resource: (Cell Signaling Technology Cat# 9664, RRID:AB_2070042)
Curator: @Naa003
SciCrunch record: RRID:AB_2070042
-
BiP
DOI: 10.7554/eLife.47084
Resource: (Cell Signaling Technology Cat# 3177, RRID:AB_2119845)
Curator: @Naa003
SciCrunch record: RRID:AB_2119845
-