DOI: 10.7554/eLife.96312

Resource: Python Programming Language (RRID:SCR_008394)

Curator: @scibot

SciCrunch record: RRID:SCR_008394

What is this?

DOI: 10.7554/eLife.96312

Resource: FSL (RRID:SCR_002823)

Curator: @scibot

SciCrunch record: RRID:SCR_002823

What is this?

DOI: 10.7554/eLife.96312

Resource: R Project for Statistical Computing (RRID:SCR_001905)

Curator: @scibot

SciCrunch record: RRID:SCR_001905

What is this?

DOI: 10.7554/eLife.92004

Resource: GraphPad Prism (RRID:SCR_002798)

Curator: @scibot

SciCrunch record: RRID:SCR_002798

What is this?

DOI: 10.7554/eLife.92004

Resource: NumPy (RRID:SCR_008633)

Curator: @scibot

SciCrunch record: RRID:SCR_008633

What is this?

DOI: 10.7554/eLife.92004

Resource: Ilastik (RRID:SCR_015246)

Curator: @scibot

SciCrunch record: RRID:SCR_015246

What is this?

DOI: 10.7554/eLife.92004

Resource: MATLAB (RRID:SCR_001622)

Curator: @scibot

SciCrunch record: RRID:SCR_001622

What is this?

DOI: 10.7554/eLife.92004

Resource: Fiji (RRID:SCR_002285)

Curator: @scibot

SciCrunch record: RRID:SCR_002285

What is this?

DOI: 10.7554/eLife.92004

Resource: None

Curator: @scibot

SciCrunch record: RRID:AB_10013771

What is this?

DOI: 10.7554/eLife.92004

Resource: Leica Application Suite X (RRID:SCR_013673)

Curator: @scibot

SciCrunch record: RRID:SCR_013673

What is this?

DOI: 10.7554/eLife.92004

Resource: (Molecular Probes Cat# A-21271, RRID:AB_221448)

Curator: @scibot

SciCrunch record: RRID:AB_221448

What is this?

DOI: 10.7554/eLife.92004

Resource: (Sigma-Aldrich Cat# 06-570, RRID:AB_310177)

Curator: @scibot

SciCrunch record: RRID:AB_310177

What is this?

DOI: 10.7554/eLife.92004

Resource: (Abcam Cat# ab6586, RRID:AB_305584)

Curator: @scibot

SciCrunch record: RRID:AB_305584

What is this?

DOI: 10.7554/eLife.92004

Resource: (Takara Bio Cat# 632496, RRID:AB_10013483)

Curator: @scibot

SciCrunch record: RRID:AB_10013483

What is this?

DOI: 10.7554/eLife.92004

Resource: (Abcam Cat# ab14511, RRID:AB_301290)

Curator: @scibot

SciCrunch record: RRID:AB_301290

What is this?

DOI: 10.7554/eLife.92004

Resource: (Aves Labs Cat# GFP-1020, RRID:AB_10000240)

Curator: @scibot

SciCrunch record: RRID:AB_10000240

What is this?

DOI: 10.7554/eLife.92004

Resource: (R and D Systems Cat# AF835, RRID:AB_2243952)

Curator: @scibot

SciCrunch record: RRID:AB_2243952

What is this?

DOI: 10.7554/eLife.92004

Resource: (Sigma-Aldrich Cat# L9393, RRID:AB_477163)

Curator: @scibot

SciCrunch record: RRID:AB_477163

What is this?

DOI: 10.7554/eLife.98514.2

Resource: RRID:BDSC_39347

Curator: @inessasarian

SciCrunch record: RRID:BDSC_39347

What is this?

DOI: 10.7554/eLife.98514.2

Resource: RRID:BDSC_32197

Curator: @inessasarian

SciCrunch record: RRID:BDSC_32197

What is this?

DOI: 10.7554/eLife.98514.2

Resource: RRID:BDSC_86738

Curator: @scibot

SciCrunch record: RRID:BDSC_86738

What is this?

DOI: 10.7554/eLife.98514.2

Resource: RRID:BDSC_9313

Curator: @scibot

SciCrunch record: RRID:BDSC_9313

What is this?

DOI: 10.7554/eLife.98514.2

Resource: RRID:BDSC_32201

Curator: @scibot

SciCrunch record: RRID:BDSC_32201

What is this?

DOI: 10.7554/eLife.98514.2

Resource: RRID:BDSC_37516

Curator: @scibot

SciCrunch record: RRID:BDSC_37516

What is this?

DOI: 10.7554/eLife.98514.2

Resource: RRID:BDSC_51987

Curator: @scibot

SciCrunch record: RRID:BDSC_51987

What is this?

DOI: 10.7554/eLife.98514.2

Resource: (Veenstra JA; Cell Tissue Res. 2008 Cat# Ilp2, RRID:AB_2569969)

Curator: @scibot

SciCrunch record: RRID:AB_2569969

What is this?

DOI: 10.7554/eLife.98514.2

Resource: Sigma-Aldrich (RRID:SCR_008988)

Curator: @scibot

SciCrunch record: RRID:SCR_008988

What is this?

DOI: 10.7554/eLife.99914

Resource: Emory University Emory Integrated Proteomics Core Facility (RRID:SCR_023530)

Curator: @scibot

SciCrunch record: RRID:SCR_023530

What is this?

DOI: 10.7554/eLife.99711

Resource: (Frontier Institute Cat# GFP-Rb-Af2020, RRID:AB_2491093)

Curator: @scibot

SciCrunch record: RRID:AB_2491093

What is this?

DOI: 10.7554/eLife.99711

Resource: (Abcam Cat# ab6673, RRID:AB_305643)

Curator: @scibot

SciCrunch record: RRID:AB_305643

What is this?

DOI: 10.7554/eLife.99711

Resource: (Frontier Institute Cat# VGAT-Rb, RRID:AB_2571622)

Curator: @scibot

SciCrunch record: RRID:AB_2571622

What is this?

DOI: 10.7554/eLife.99711

Resource: (Frontier Institute Cat# VGluT2-GP, RRID:AB_2571621)

Curator: @scibot

SciCrunch record: RRID:AB_2571621

What is this?

DOI: 10.7554/eLife.99711

Resource: (Frontier Institute Cat# VGluT2-Rb, RRID:AB_2571619)

Curator: @scibot

SciCrunch record: RRID:AB_2571619

What is this?

DOI: 10.7554/eLife.99711

Resource: (Frontier Institute Cat# GluRe1C-Rb, RRID:AB_2571605)

Curator: @scibot

SciCrunch record: RRID:AB_2571605

What is this?

DOI: 10.7554/eLife.99711

Resource: (Frontier Institute Cat# VGluT2-Go, RRID:AB_2571620)

Curator: @scibot

SciCrunch record: RRID:AB_2571620

What is this?

DOI: 10.7554/eLife.99711

Resource: (Frontier Institute Cat# GABAARa1-GP, RRID:AB_2571572)

Curator: @scibot

SciCrunch record: RRID:AB_2571572

What is this?

DOI: 10.7554/eLife.99711

Resource: (Frontier Institute Cat# VGAT-GP, RRID:AB_2571624)

Curator: @scibot

SciCrunch record: RRID:AB_2571624

What is this?

DOI: 10.7554/eLife.98363

Resource: RRID:BDSC_66279

Curator: @scibot

SciCrunch record: RRID:BDSC_66279

What is this?

DOI: 10.7554/eLife.98363

Resource: RRID:Addgene_59799

Curator: @scibot

SciCrunch record: RRID:Addgene_59799

What is this?

DOI: 10.7554/eLife.98363

Resource: Fiji (RRID:SCR_002285)

Curator: @scibot

SciCrunch record: RRID:SCR_002285

What is this?

DOI: 10.7554/eLife.98363

Resource: (BCRJ Cat# 0223, RRID:CVCL_0019)

Curator: @scibot

SciCrunch record: RRID:CVCL_0019

What is this?

DOI: 10.7554/eLife.98363

Resource: RRID:BDSC_7107

Curator: @scibot

SciCrunch record: RRID:BDSC_7107

What is this?

DOI: 10.7554/eLife.98363

Resource: RRID:BDSC_8147

Curator: @scibot

SciCrunch record: RRID:BDSC_8147

What is this?

DOI: 10.7554/eLife.98363

Resource: RRID:BDSC_27396

Curator: @scibot

SciCrunch record: RRID:BDSC_27396

What is this?

DOI: 10.7554/eLife.98363

Resource: RRID:BDSC_56842

Curator: @scibot

SciCrunch record: RRID:BDSC_56842

What is this?

DOI: 10.7554/eLife.98363

Resource: (RRID:CVCL_0063)

Curator: @scibot

SciCrunch record: RRID:CVCL_0063

What is this?

DOI: 10.7554/eLife.98363

Resource: RRID:BDSC_8148

Curator: @scibot

SciCrunch record: RRID:BDSC_8148

What is this?

DOI: 10.7554/eLife.98250

Resource: RRID:IMSR_JAX:000664

Curator: @scibot

SciCrunch record: RRID:IMSR_JAX:000664

What is this?

DOI: 10.7554/eLife.98250

Resource: ShinyCell (RRID:SCR_022756)

Curator: @scibot

SciCrunch record: RRID:SCR_022756

What is this?

DOI: 10.7554/eLife.98250

Resource: Slingshot (RRID:SCR_017012)

Curator: @scibot

SciCrunch record: RRID:SCR_017012

What is this?

DOI: 10.7554/eLife.98250

Resource: EnhancedVolcano (RRID:SCR_018931)

Curator: @scibot

SciCrunch record: RRID:SCR_018931

What is this?

DOI: 10.7554/eLife.98250

Resource: ggplot2 (RRID:SCR_014601)

Curator: @scibot

SciCrunch record: RRID:SCR_014601

What is this?

DOI: 10.7554/eLife.98250

Resource: Trim Galore (RRID:SCR_011847)

Curator: @scibot

SciCrunch record: RRID:SCR_011847

What is this?

DOI: 10.7554/eLife.98250

Resource: Seurat (RRID:SCR_016341)

Curator: @scibot

SciCrunch record: RRID:SCR_016341

What is this?

DOI: 10.7554/eLife.98250

Resource: SoupX (RRID:SCR_019193)

Curator: @scibot

SciCrunch record: RRID:SCR_019193

What is this?

DOI: 10.7554/eLife.98250

Resource: clusterProfiler (RRID:SCR_016884)

Curator: @scibot

SciCrunch record: RRID:SCR_016884

What is this?

DOI: 10.7554/eLife.98250

Resource: (Jackson ImmunoResearch Labs Cat# 712-165-153, RRID:AB_2340667)

Curator: @scibot

SciCrunch record: RRID:AB_2340667

What is this?

DOI: 10.7554/eLife.98250

Resource: (Jackson ImmunoResearch Labs Cat# 805-545-180, RRID:AB_2340883)

Curator: @scibot

SciCrunch record: RRID:AB_2340883

What is this?

DOI: 10.7554/eLife.98250

Resource: (Jackson ImmunoResearch Labs Cat# 715-605-150, RRID:AB_2340862)

Curator: @scibot

SciCrunch record: RRID:AB_2340862

What is this?

DOI: 10.7554/eLife.98250

Resource: (Jackson ImmunoResearch Labs Cat# 711-165-152, RRID:AB_2307443)

Curator: @scibot

SciCrunch record: RRID:AB_2307443

What is this?

DOI: 10.7554/eLife.98250

Resource: (Proteintech Cat# 16686-1-AP, RRID:AB_2276275)

Curator: @scibot

SciCrunch record: RRID:AB_2276275

What is this?

DOI: 10.7554/eLife.98250

Resource: 10x Genomics Cellranger DNA (RRID:SCR_023221)

Curator: @scibot

SciCrunch record: RRID:SCR_023221

What is this?

DOI: 10.7554/eLife.98250

Resource: (Proteintech Cat# 14643-1-AP, RRID:AB_2178440)

Curator: @scibot

SciCrunch record: RRID:AB_2178440

What is this?

DOI: 10.7554/eLife.98250

Resource: (Enzo Life Sciences Cat# ADI-SPA-891, RRID:AB_10615355)

Curator: @scibot

SciCrunch record: RRID:AB_10615355

What is this?

DOI: 10.7554/eLife.98250

Resource: (Abcam Cat# ab10286, RRID:AB_2069009)

Curator: @scibot

SciCrunch record: RRID:AB_2069009

What is this?

DOI: 10.7554/eLife.98250

Resource: None

Curator: @scibot

SciCrunch record: RRID:AB_2792821

What is this?

DOI: 10.7554/eLife.98250

Resource: (Thermo Fisher Scientific Cat# PA3-015, RRID:AB_2239072)

Curator: @scibot

SciCrunch record: RRID:AB_2239072

What is this?

DOI: 10.7554/eLife.98250

Resource: (BD Biosciences Cat# 610978, RRID:AB_398291)

Curator: @scibot

SciCrunch record: RRID:AB_398291

What is this?

DOI: 10.7554/eLife.98250

Resource: None

Curator: @scibot

SciCrunch record: RRID:AB_2810040

What is this?

DOI: 10.7554/eLife.98250

Resource: (Santa Cruz Biotechnology Cat# sc-58774, RRID:AB_784161)

Curator: @scibot

SciCrunch record: RRID:AB_784161

What is this?

DOI: 10.7554/eLife.98250

Resource: (Jackson ImmunoResearch Labs Cat# 001-000-173, RRID:AB_2336947)

Curator: @scibot

SciCrunch record: RRID:AB_2336947

What is this?

DOI: 10.7554/eLife.98250

Resource: (MBL International Cat# 551, RRID:AB_591430)

Curator: @scibot

SciCrunch record: RRID:AB_591430

What is this?

DOI: 10.7554/eLife.98250

Resource: (Roche Cat# 11426346910, RRID:AB_840257)

Curator: @scibot

SciCrunch record: RRID:AB_840257

What is this?

DOI: 10.7554/eLife.98250

Resource: None

Curator: @scibot

SciCrunch record: RRID:AB_3094987

What is this?

DOI: 10.7554/eLife.98250

Resource: (Sigma-Aldrich Cat# 11426338910, RRID:AB_2734723)

Curator: @scibot

SciCrunch record: RRID:AB_2734723

What is this?

DOI: 10.7554/eLife.98250

Resource: (Thermo Fisher Scientific Cat# MA3-016, RRID:AB_2248666)

Curator: @scibot

SciCrunch record: RRID:AB_2248666

What is this?

DOI: 10.7554/eLife.98250

Resource: (Roche Cat# 11093274910, RRID:AB_514497)

Curator: @scibot

SciCrunch record: RRID:AB_514497

What is this?

DOI: 10.7554/eLife.98250

Resource: (Roche Cat# 11207733910, RRID:AB_514500)

Curator: @scibot

SciCrunch record: RRID:AB_514500

What is this?

DOI: 10.7554/eLife.96691

Resource: (IMSR Cat# JAX_024109,RRID:IMSR_JAX:024109)

Curator: @scibot

SciCrunch record: RRID:IMSR_JAX:024109

What is this?

DOI: 10.7554/eLife.96691

Resource: RRID:IMSR_JAX:033169

Curator: @scibot

SciCrunch record: RRID:IMSR_JAX:033169

What is this?

DOI: 10.7554/eLife.96691

Resource: RRID:IMSR_JAX:000664

Curator: @scibot

SciCrunch record: RRID:IMSR_JAX:000664

What is this?

DOI: 10.7554/eLife.96284

Resource: EnhancedVolcano (RRID:SCR_018931)

Curator: @scibot

SciCrunch record: RRID:SCR_018931

What is this?

DOI: 10.7554/eLife.96284

Resource: Integrative Genomics Viewer (RRID:SCR_011793)

Curator: @scibot

SciCrunch record: RRID:SCR_011793

What is this?

DOI: 10.7554/eLife.96284

Resource: rna-star (RRID:SCR_004463)

Curator: @scibot

SciCrunch record: RRID:SCR_004463

What is this?

DOI: 10.7554/eLife.96284

Resource: pysam (RRID:SCR_021017)

Curator: @scibot

SciCrunch record: RRID:SCR_021017

What is this?

DOI: 10.7554/eLife.96284

Resource: DESeq2 (RRID:SCR_015687)

Curator: @scibot

SciCrunch record: RRID:SCR_015687

What is this?

DOI: 10.7554/eLife.96284

Resource: Nanopolish (RRID:SCR_016157)

Curator: @scibot

SciCrunch record: RRID:SCR_016157

What is this?

DOI: 10.7554/eLife.96284

Resource: Minimap2 (RRID:SCR_018550)

Curator: @scibot

SciCrunch record: RRID:SCR_018550

What is this?

DOI: 10.7554/eLife.96284

Resource: clusterProfiler (RRID:SCR_016884)

Curator: @scibot

SciCrunch record: RRID:SCR_016884

What is this?

DOI: 10.7554/eLife.96284

Resource: cutadapt (RRID:SCR_011841)

Curator: @scibot

SciCrunch record: RRID:SCR_011841

What is this?

DOI: 10.7554/eLife.96284

Resource: RRID:Addgene_147650

Curator: @scibot

SciCrunch record: RRID:Addgene_147650

What is this?

DOI: 10.7554/eLife.96284

Resource: None

Curator: @scibot

SciCrunch record: RRID:Addgene_148902

What is this?

DOI: 10.7554/eLife.96284

Resource: Guppy basecaller (RRID:SCR_023196)

Curator: @scibot

SciCrunch record: RRID:SCR_023196

What is this?

DOI: 10.7554/eLife.96284

Resource: (ICLC Cat# HTL95023, RRID:CVCL_0030)

Curator: @scibot

SciCrunch record: RRID:CVCL_0030

What is this?

DOI: 10.7554/eLife.96284

Resource: (Thermo Fisher Scientific Cat# 31439, RRID:AB_228292)

Curator: @scibot

SciCrunch record: RRID:AB_228292

What is this?

DOI: 10.7554/eLife.96284

Resource: (Abcam Cat# ab150080, RRID:AB_2650602)

Curator: @scibot

SciCrunch record: RRID:AB_2650602

What is this?

DOI: 10.7554/eLife.96284

Resource: (Thermo Fisher Scientific Cat# 31462, RRID:AB_228338)

Curator: @scibot

SciCrunch record: RRID:AB_228338

What is this?

DOI: 10.7554/eLife.96284

Resource: (RCB Cat# RCB2767, RRID:CVCL_0594)

Curator: @scibot

SciCrunch record: RRID:CVCL_0594

What is this?

DOI: 10.7554/eLife.96284

Resource: (Thermo Fisher Scientific Cat# PA5-29455, RRID:AB_2546931)

Curator: @scibot

SciCrunch record: RRID:AB_2546931

What is this?

DOI: 10.7554/eLife.96284

Resource: None

Curator: @scibot

SciCrunch record: RRID:AB_2394335

What is this?

DOI: 10.7554/eLife.96284

Resource: (Bethyl Cat# A300-443A, RRID:AB_2219047)

Curator: @scibot

SciCrunch record: RRID:AB_2219047

What is this?

DOI: 10.7554/eLife.96284

Resource: (Proteintech Cat# 66009-1-Ig, RRID:AB_2687938)

Curator: @scibot

SciCrunch record: RRID:AB_2687938

What is this?

DOI: 10.7554/eLife.96284

Resource: (Cell Signaling Technology Cat# 9721, RRID:AB_330951)

Curator: @scibot

SciCrunch record: RRID:AB_330951

What is this?

DOI: 10.7554/eLife.95597

Resource: (Santa Cruz Biotechnology Cat# sc-81471, RRID:AB_2077111)

Curator: @scibot

SciCrunch record: RRID:AB_2077111

What is this?

DOI: 10.7554/eLife.95597

Resource: (Sigma-Aldrich Cat# L9393, RRID:AB_477163)

Curator: @scibot

SciCrunch record: RRID:AB_477163

What is this?

DOI: 10.7554/eLife.95597

Resource: (Sigma-Aldrich Cat# A7811, RRID:AB_476766)

Curator: @scibot

SciCrunch record: RRID:AB_476766

What is this?

DOI: 10.7554/eLife.92979.2

Resource: RRID:Addgene_13458

Curator: @scibot

SciCrunch record: RRID:Addgene_13458

What is this?

DOI: 10.7554/eLife.92718

Resource: (BioLegend Cat# 133403, RRID:AB_2203542)

Curator: @scibot

SciCrunch record: RRID:AB_2203542

What is this?

DOI: 10.7554/eLife.92718

Resource: (BioLegend Cat# 142510, RRID:AB_2561601)

Curator: @scibot

SciCrunch record: RRID:AB_2561601

What is this?

DOI: 10.7554/eLife.92718

Resource: (BioLegend Cat# 116223, RRID:AB_2137788)

Curator: @scibot

SciCrunch record: RRID:AB_2137788

What is this?

DOI: 10.7554/eLife.92718

Resource: (BD Biosciences Cat# 553403, RRID:AB_394840)

Curator: @scibot

SciCrunch record: RRID:AB_394840

What is this?

DOI: 10.7554/eLife.92718

Resource: (BioLegend Cat# 406606, RRID:AB_493293)

Curator: @scibot

SciCrunch record: RRID:AB_493293

What is this?

DOI: 10.7554/eLife.92718

Resource: (BioLegend Cat# 108723, RRID:AB_830870)

Curator: @scibot

SciCrunch record: RRID:AB_830870

What is this?

DOI: 10.7554/eLife.92718

Resource: (BioLegend Cat# 115520, RRID:AB_313655)

Curator: @scibot

SciCrunch record: RRID:AB_313655

What is this?

DOI: 10.7554/eLife.92718

Resource: (BioLegend Cat# 100714, RRID:AB_312753)

Curator: @scibot

SciCrunch record: RRID:AB_312753

What is this?

DOI: 10.7554/eLife.92718

Resource: (BD Biosciences Cat# 553399, RRID:AB_394837)

Curator: @scibot

SciCrunch record: RRID:AB_394837

What is this?

DOI: 10.7554/eLife.92718

Resource: (BioLegend Cat# 406517, RRID:AB_10899576)

Curator: @scibot

SciCrunch record: RRID:AB_10899576

What is this?

DOI: 10.7554/eLife.92718

Resource: RRID:Addgene_73447

Curator: @scibot

SciCrunch record: RRID:Addgene_73447

What is this?

DOI: 10.7554/eLife.92718

Resource: (BioLegend Cat# 405725, RRID:AB_2562743)

Curator: @scibot

SciCrunch record: RRID:AB_2562743

What is this?

DOI: 10.7554/eLife.92718

Resource: (BioLegend Cat# 637310, RRID:AB_2563148)

Curator: @scibot

SciCrunch record: RRID:AB_2563148

What is this?

DOI: 10.7554/eLife.92718

Resource: (BioLegend Cat# 100414, RRID:AB_312699)

Curator: @scibot

SciCrunch record: RRID:AB_312699

What is this?

DOI: 10.7554/eLife.91083

Resource: RRID:BDSC_21

Curator: @scibot

SciCrunch record: RRID:BDSC_21

What is this?

DOI: 10.7554/eLife.91083

Resource: (RRID:CVCL_0063)

Curator: @scibot

SciCrunch record: RRID:CVCL_0063

What is this?

DOI: 10.7554/eLife.91083

Resource: RRID:Addgene_11517

Curator: @scibot

SciCrunch record: RRID:Addgene_11517

What is this?

DOI: 10.7554/eLife.90296

Resource: (Thermo Fisher Scientific Cat# A-21235, RRID:AB_2535804)

Curator: @scibot

SciCrunch record: RRID:AB_2535804

What is this?

DOI: 10.7554/eLife.90296

Resource: (Molecular Probes Cat# A-11007, RRID:AB_141374)

Curator: @scibot

SciCrunch record: RRID:AB_141374

What is this?

DOI: 10.7554/eLife.90296

Resource: (Thermo Fisher Scientific Cat# A-11008, RRID:AB_143165)

Curator: @scibot

SciCrunch record: RRID:AB_143165

What is this?

DOI: 10.7554/eLife.90296

Resource: (Thermo Fisher Scientific Cat# 14-4875-80, RRID:AB_11043546)

Curator: @scibot

SciCrunch record: RRID:AB_11043546

What is this?

DOI: 10.7554/eLife.90296

Resource: (Synaptic Systems Cat# 214 011, RRID:AB_2068201)

Curator: @scibot

SciCrunch record: RRID:AB_2068201

What is this?

DOI: 10.7554/eLife.90296

Resource: (Abcam Cat# ab6211, RRID:AB_2240393)

Curator: @scibot

SciCrunch record: RRID:AB_2240393

What is this?

DOI: 10.7554/eLife.90296

Resource: (Millipore Cat# AB3080P, RRID:AB_2630379)

Curator: @scibot

SciCrunch record: RRID:AB_2630379

What is this?

DOI: 10.7554/eLife.90046

Resource: MATLAB (RRID:SCR_001622)

Curator: @scibot

SciCrunch record: RRID:SCR_001622

What is this?

DOI: 10.7554/eLife.103689.1

Resource: SPM (RRID:SCR_007037)

Curator: @scibot

SciCrunch record: RRID:SCR_007037

What is this?

DOI: 10.7554/eLife.103689.1

Resource: MATLAB (RRID:SCR_001622)

Curator: @scibot

SciCrunch record: RRID:SCR_001622

What is this?

DOI: 10.7554/eLife.102852.1

Resource: (ATCC Cat# CRL-4000, RRID:CVCL_4388)

Curator: @scibot

SciCrunch record: RRID:CVCL_4388

What is this?

DOI: 10.7554/eLife.102852.1

Resource: RRID:Addgene_86613

Curator: @scibot

SciCrunch record: RRID:Addgene_86613

What is this?

DOI: 10.7554/eLife.102852.1

Resource: (Lab Vision Cat# MS-710-PABX, RRID:AB_141904)

Curator: @scibot

SciCrunch record: RRID:AB_141904

What is this?

DOI: 10.7554/eLife.102852.1

Resource: RRID:Addgene_52961

Curator: @scibot

SciCrunch record: RRID:Addgene_52961

What is this?

DOI: 10.7554/eLife.102852.1

Resource: (Coriell Cat# GM05887, RRID:CVCL_2270)

Curator: @scibot

SciCrunch record: RRID:CVCL_2270

What is this?

DOI: 10.7554/eLife.102852.1

Resource: (RRID:CVCL_0063)

Curator: @scibot

SciCrunch record: RRID:CVCL_0063

What is this?

DOI: 10.7554/eLife.100449

Resource: Wisconsin-Madison University Biotechnology Center Gene Expression Center Core Facility (RRID:SCR_017757)

Curator: @scibot

SciCrunch record: RRID:SCR_017757

What is this?

DOI: 10.7554/eLife.100449

Resource: DESeq2 (RRID:SCR_015687)

Curator: @scibot

SciCrunch record: RRID:SCR_015687

What is this?

DOI: 10.7554/eLife.100449

Resource: featureCounts (RRID:SCR_012919)

Curator: @scibot

SciCrunch record: RRID:SCR_012919

What is this?

DOI: 10.7554/eLife.100449

Resource: Salmon (RRID:SCR_017036)

Curator: @scibot

SciCrunch record: RRID:SCR_017036

What is this?

DOI: 10.7554/eLife.100449

Resource: ImageJ (RRID:SCR_003070)

Curator: @scibot

SciCrunch record: RRID:SCR_003070

What is this?

DOI: 10.7554/eLife.100449

Resource: fastp (RRID:SCR_016962)

Curator: @scibot

SciCrunch record: RRID:SCR_016962

What is this?

DOI: 10.7554/eLife.100449

Resource: rna-star (RRID:SCR_004463)

Curator: @scibot

SciCrunch record: RRID:SCR_004463

What is this?

DOI: 10.7554/eLife.100449

Resource: FastQC (RRID:SCR_014583)

Curator: @scibot

SciCrunch record: RRID:SCR_014583

What is this?

DOI: 10.7554/eLife.100449

Resource: Samtools (RRID:SCR_002105)

Curator: @scibot

SciCrunch record: RRID:SCR_002105

What is this?

DOI: 10.7554/eLife.100449

Resource: R Project for Statistical Computing (RRID:SCR_001905)

Curator: @scibot

SciCrunch record: RRID:SCR_001905

What is this?

DOI: 10.7554/eLife.100449

Resource: Phenix (RRID:SCR_014224)

Curator: @scibot

SciCrunch record: RRID:SCR_014224

What is this?

DOI: 10.7554/eLife.100449

Resource: UCSF ChimeraX (RRID:SCR_015872)

Curator: @scibot

SciCrunch record: RRID:SCR_015872

What is this?

DOI: 10.7554/eLife.100449

Resource: RELION (RRID:SCR_016274)

Curator: @scibot

SciCrunch record: RRID:SCR_016274

What is this?

DOI: 10.7554/eLife.100449

Resource: Coot (RRID:SCR_014222)

Curator: @scibot

SciCrunch record: RRID:SCR_014222

What is this?

DOI: 10.7554/eLife.100449

Resource: (Bio-Rad Cat# 170-6516, RRID:AB_11125547)

Curator: @scibot

SciCrunch record: RRID:AB_11125547

What is this?

DOI: 10.7554/eLife.100449

Resource: ISOLDE (RRID:SCR_025577)

Curator: @scibot

SciCrunch record: RRID:SCR_025577

What is this?

DOI: 10.7554/eLife.100449

Resource: (Sigma-Aldrich Cat# F1804, RRID:AB_262044)

Curator: @scibot

SciCrunch record: RRID:AB_262044

What is this?

DOI: 10.7554/eLife.100449

Resource: (Millipore Cat# MAB1501, RRID:AB_2223041)

Curator: @scibot

SciCrunch record: RRID:AB_2223041

What is this?

DOI: 10.7554/eLife.96997

Resource: NiLearn (RRID:SCR_001362)

Curator: @scibot

SciCrunch record: RRID:SCR_001362

What is this?

DOI: 10.7554/eLife.96997

Resource: ICBM 152 Nonlinear atlases version 2009 (RRID:SCR_008796)

Curator: @scibot

SciCrunch record: RRID:SCR_008796

What is this?

DOI: 10.7554/eLife.96997

Resource: ANTS - Advanced Normalization ToolS (RRID:SCR_004757)

Curator: @scibot

SciCrunch record: RRID:SCR_004757

What is this?

DOI: 10.7554/eLife.96997

Resource: FMRIPREP (RRID:SCR_016216)

Curator: @scibot

SciCrunch record: RRID:SCR_016216

What is this?

DOI: 10.7554/eLife.96997

Resource: Nipype (RRID:SCR_002502)

Curator: @scibot

SciCrunch record: RRID:SCR_002502

What is this?

DOI: 10.7554/eLife.94334

Resource: RRID:BDSC_16

Curator: @scibot

SciCrunch record: RRID:BDSC_16

What is this?

DOI: 10.7554/eLife.94334

Resource: RRID:BDSC_15

Curator: @scibot

SciCrunch record: RRID:BDSC_15

What is this?

DOI: 10.7554/eLife.94334

Resource: RRID:BDSC_259

Curator: @scibot

SciCrunch record: RRID:BDSC_259

What is this?

DOI: 10.7554/eLife.94334

Resource: (Abcam Cat# ab166859, RRID:AB_2801547)

Curator: @scibot

SciCrunch record: RRID:AB_2801547

What is this?

DOI: 10.7554/eLife.94334

Resource: RRID:BDSC_257

Curator: @scibot

SciCrunch record: RRID:BDSC_257

What is this?

DOI: 10.7554/eLife.94334

Resource: None

Curator: @inessasarian

SciCrunch record: RRID:AB_303599

What is this?

DOI: 10.7554/eLife.94334

Resource: None

Curator: @inessasarian

SciCrunch record: RRID:AB_302562

What is this?

DOI: 10.7554/eLife.89421.2

Resource: Distributed Archives for Neurophysiology Data Integration (RRID:SCR_017571)

Curator: @bandrow

SciCrunch record: RRID:SCR_017571

What is this?

DOI: 10.7554/eLife.50294

Resource: University of California at San Francisco Advanced Microscopy Core Facility (RRID:SCR_025781)

Curator: @dhovakimyan1

SciCrunch record: RRID:SCR_025781

What is this?

DOI: 10.7554/eLife.66240

Resource: None

Curator: @AlecAsdourian

SciCrunch record: RRID:IMSR_JAX:002779

What is this?

DOI: 10.7554/eLife.66240

Resource: None

Curator: @AlecAsdourian

SciCrunch record: RRID:IMSR_JAX:004297

What is this?

DOI: 10.7554/eLife.66240

Resource: None

Curator: @vtello

SciCrunch record: RRID:SCR_009793

What is this?

DOI: 10.7554/eLife.48907

Resource: University of California at San Francisco Advanced Microscopy Core Facility (RRID:SCR_025781)

Curator: @dhovakimyan1

SciCrunch record: RRID:SCR_025781

What is this?

DOI: 10.7554/eLife.51131

Resource: University of California at San Francisco Advanced Microscopy Core Facility (RRID:SCR_025781)

Curator: @dhovakimyan1

SciCrunch record: RRID:SCR_025781

What is this?

DOI: 10.7554/eLife.51131

Resource: RRID:BDSC_21

Curator: @scibot

SciCrunch record: RRID:BDSC_21

What is this?

DOI: 10.7554/eLife.100987.3

Resource: University of California at San Francisco Advanced Microscopy Core Facility (RRID:SCR_025781)

Curator: @dhovakimyan1

SciCrunch record: RRID:SCR_025781

What is this?

DOI: 10.7554/eLife.58823

Resource: University of California at San Francisco Advanced Microscopy Core Facility (RRID:SCR_025781)

Curator: @dhovakimyan1

SciCrunch record: RRID:SCR_025781

What is this?

DOI: 10.7554/eLife.59038

Resource: University of California at San Francisco Advanced Microscopy Core Facility (RRID:SCR_025781)

Curator: @dhovakimyan1

SciCrunch record: RRID:SCR_025781

What is this?

DOI: 10.7554/eLife.58464

Resource: University of California at San Francisco Advanced Microscopy Core Facility (RRID:SCR_025781)

Curator: @dhovakimyan1

SciCrunch record: RRID:SCR_025781

What is this?

DOI: 10.7554/eLife.56185

Resource: University of California at San Francisco Advanced Microscopy Core Facility (RRID:SCR_025781)

Curator: @dhovakimyan1

SciCrunch record: RRID:SCR_025781

What is this?

smth about them not heavily relying on vocal cues? check class notes; very ltitle research supporting somatosensory reinforcement

relevance of this paper

basal ganglia and dopaminergic inputs aer needed for non auditory vocal learnign

Recorded bird’s song for 3 days without interference/feedback Analyzed the pitch of each syllable during this to know its normal pitch range (distribution) Selected a target syllable with consistent and measurable pitch pattern Pitch threshold was set based on pitch distribution

DOI: 10.7554/eLife.99052

Resource: RRID:BDSC_21

Curator: @scibot

SciCrunch record: RRID:BDSC_21

What is this?

DOI: 10.7554/eLife.97189.2

Resource: (ABclonal Cat# AE003, RRID:AB_2728734)

Curator: @scibot

SciCrunch record: RRID:AB_2728734

What is this?

DOI: 10.7554/eLife.97189.2

Resource: (ABclonal Cat# AC026, RRID:AB_2768234)

Curator: @scibot

SciCrunch record: RRID:AB_2768234

What is this?

DOI: 10.7554/eLife.97189.2

Resource: (ABclonal Cat# AE012, RRID:AB_2770402)

Curator: @scibot

SciCrunch record: RRID:AB_2770402

What is this?

DOI: 10.7554/eLife.96755.3

Resource: (Proteintech Cat# 11224-1-AP, RRID:AB_2210206)

Curator: @scibot

SciCrunch record: RRID:AB_2210206

What is this?

DOI: 10.7554/eLife.96755.3

Resource: (Proteintech Cat# SA00001-2, RRID:AB_2722564)

Curator: @scibot

SciCrunch record: RRID:AB_2722564

What is this?

DOI: 10.7554/eLife.96755.3

Resource: (Abcam Cat# ab7291, RRID:AB_2241126)

Curator: @scibot

SciCrunch record: RRID:AB_2241126

What is this?

DOI: 10.7554/eLife.96755.3

Resource: (Molecular Probes Cat# A-11005, RRID:AB_141372)

Curator: @scibot

SciCrunch record: RRID:AB_141372

What is this?

DOI: 10.7554/eLife.96755.3

Resource: (Signalway Cat# 32484, RRID:AB_2941094)

Curator: @scibot

SciCrunch record: RRID:AB_2941094

What is this?

DOI: 10.7554/eLife.96755.3

Resource: (Thermo Fisher Scientific Cat# A-11008, RRID:AB_143165)

Curator: @scibot

SciCrunch record: RRID:AB_143165

What is this?

DOI: 10.7554/eLife.96755.3

Resource: (Proteintech Cat# 11802-1-AP, RRID:AB_2207530)

Curator: @scibot

SciCrunch record: RRID:AB_2207530

What is this?

DOI: 10.7554/eLife.96755.3

Resource: (Abcam Cat# ab24610, RRID:AB_448182)

Curator: @scibot

SciCrunch record: RRID:AB_448182

What is this?

DOI: 10.7554/eLife.96755.3

Resource: (Proteintech Cat# 12756-1-AP, RRID:AB_10643244)

Curator: @scibot

SciCrunch record: RRID:AB_10643244

What is this?