FlowJo
DOI: 10.7554/eLife.47327
Resource: FlowJo (RRID:SCR_008520)
Curator: @Naa003
SciCrunch record: RRID:SCR_008520
10,000 Matching Annotations
- Jul 2021
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elifesciences.org elifesciences.org
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Image J
DOI: 10.7554/eLife.47327
Resource: ImageJ (RRID:SCR_003070)
Curator: @Naa003
SciCrunch record: RRID:SCR_003070
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elifesciences.org elifesciences.org
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R
DOI: 10.7554/eLife.47929
Resource: R Project for Statistical Computing (RRID:SCR_001905)
Curator: @Naa003
SciCrunch record: RRID:SCR_001905
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FIJI
DOI: 10.7554/eLife.47929
Resource: Fiji (RRID:SCR_002285)
Curator: @Naa003
SciCrunch record: RRID:SCR_002285
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Wnt1-Cre; ZsGreenfl/fl
DOI: 10.7554/eLife.47929
Resource: (IMSR Cat# JAX_003829,RRID:IMSR_JAX:003829)
Curator: @Naa003
SciCrunch record: RRID:IMSR_JAX:003829
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Mouse monoclonal anti-NH2 terminal synthetic decapeptide of alphasmooth muscle actin, IgG2a
DOI: 10.7554/eLife.47929
Resource: (Sigma-Aldrich Cat# A5228, RRID:AB_262054)
Curator: @Naa003
SciCrunch record: RRID:AB_262054
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Mouse monoclonal anti-human phospho-histone H3, IgG1
DOI: 10.7554/eLife.47929
Resource: (Abcam Cat# ab14955, RRID:AB_443110)
Curator: @Naa003
SciCrunch record: RRID:AB_443110
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Rabbit polyclonal anti-human Caspase 3, IgG
DOI: 10.7554/eLife.47929
Resource: (R and D Systems Cat# AF835, RRID:AB_2243952)
Curator: @Naa003
SciCrunch record: RRID:AB_2243952
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Goat polyclonal anti -GFP, IgG
DOI: 10.7554/eLife.47929
Resource: (Abcam Cat# ab6673, RRID:AB_305643)
Curator: @Naa003
SciCrunch record: RRID:AB_305643
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elifesciences.org elifesciences.org
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mouse anti-syntaxin
DOI: 10.7554/eLife.46112
Resource: (DSHB Cat# 8c3, RRID:AB_528484)
Curator: @Naa003
SciCrunch record: RRID:AB_528484
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mouse anti-αα<math id="inf307"><mi>α</mi></math>-synuclein
DOI: 10.7554/eLife.46112
Resource: (Abcam Cat# ab3309, RRID:AB_303693)
Curator: @Naa003
SciCrunch record: RRID:AB_303693
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anti-mouse IgG
DOI: 10.7554/eLife.46112
Resource: (GE Healthcare Cat# NXA931, RRID:AB_772209)
Curator: @Naa003
SciCrunch record: RRID:AB_772209
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mouse anti-beta-tubulin
DOI: 10.7554/eLife.46112
Resource: (DSHB Cat# E7, RRID:AB_528499)
Curator: @Naa003
SciCrunch record: RRID:AB_528499
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rabbit anti-αα<math id="inf288"><mi>α</mi></math>-synuclein
DOI: 10.7554/eLife.46112
Resource: (Cell Signaling Technology Cat# 2642, RRID:AB_2192679)
Curator: @Naa003
SciCrunch record: RRID:AB_2192679
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MicroCal Origin
DOI: 10.7554/eLife.46112
Resource: Microcal Origin (RRID:SCR_002815)
Curator: @Naa003
SciCrunch record: RRID:SCR_002815
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elifesciences.org elifesciences.org
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Bowtie
DOI: 10.7554/eLife.46007
Resource: Bowtie (RRID:SCR_005476)
Curator: @Naa003
SciCrunch record: RRID:SCR_005476
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elifesciences.org elifesciences.org
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STATISTICA
DOI: 10.7554/eLife.46356
Resource: STATISTICA (RRID:SCR_014213)
Curator: @Naa003
SciCrunch record: RRID:SCR_014213
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Reconstruct
DOI: 10.7554/eLife.46356
Resource: Synapse Web Reconstruct (RRID:SCR_002716)
Curator: @Naa003
SciCrunch record: RRID:SCR_002716
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Igor Pro
DOI: 10.7554/eLife.46356
Resource: IGOR Pro (RRID:SCR_000325)
Curator: @Naa003
SciCrunch record: RRID:SCR_000325
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elifesciences.org elifesciences.org
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IMOD
DOI: 10.7554/eLife.47156
Resource: IMOD (RRID:SCR_003297)
Curator: @Naa003
SciCrunch record: RRID:SCR_003297
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Annotators
URL
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elifesciences.org elifesciences.org
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Graphpad Prism
DOI: 10.7554/eLife.49158
Resource: GraphPad Prism (RRID:SCR_002798)
Curator: @Naa003
SciCrunch record: RRID:SCR_002798
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clusterProfiler
DOI: 10.7554/eLife.49158
Resource: clusterProfiler (RRID:SCR_016884)
Curator: @Naa003
SciCrunch record: RRID:SCR_016884
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STAR
DOI: 10.7554/eLife.49158
Resource: STAR (RRID:SCR_015899)
Curator: @Naa003
SciCrunch record: RRID:SCR_015899
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Salmon
DOI: 10.7554/eLife.49158
Resource: Salmon (RRID:SCR_017036)
Curator: @Naa003
SciCrunch record: RRID:SCR_017036
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FastQC
DOI: 10.7554/eLife.49158
Resource: FastQC (RRID:SCR_014583)
Curator: @Naa003
SciCrunch record: RRID:SCR_014583
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FIJI
DOI: 10.7554/eLife.49158
Resource: Fiji (RRID:SCR_002285)
Curator: @Naa003
SciCrunch record: RRID:SCR_002285
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RRID:WB-STRAIN:CU6372
DOI: 10.7554/eLife.49158
Resource: (WB Cat# CU6372,RRID:WB-STRAIN:CU6372)
Curator: @Naa003
SciCrunch record: RRID:WB-STRAIN:CU6372
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RRID:WB-STRAIN:CU5991
DOI: 10.7554/eLife.49158
Resource: (WB Cat# CU5991,RRID:WB-STRAIN:CU5991)
Curator: @Naa003
SciCrunch record: RRID:WB-STRAIN:CU5991
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RRID:WB-STRAIN:RB1206
DOI: 10.7554/eLife.49158
Resource: (WB Cat# RB1206,RRID:WB-STRAIN:RB1206)
Curator: @Naa003
SciCrunch record: RRID:WB-STRAIN:RB1206
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RRID:WB-STRAIN:RB754
DOI: 10.7554/eLife.49158
Resource: (WB Cat# RB754,RRID:WB-STRAIN:RB754)
Curator: @Naa003
SciCrunch record: RRID:WB-STRAIN:RB754
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RRID:WB-STRAIN:VC222
DOI: 10.7554/eLife.49158
Resource: (WB Cat# VC222,RRID:WB-STRAIN:VC222)
Curator: @Naa003
SciCrunch record: RRID:WB-STRAIN:VC222
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elifesciences.org elifesciences.org
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FlowJo
DOI: 10.7554/eLife.47084
Resource: FlowJo (RRID:SCR_008520)
Curator: @Naa003
SciCrunch record: RRID:SCR_008520
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ImageJ
DOI: 10.7554/eLife.47084
Resource: ImageJ (RRID:SCR_003070)
Curator: @Naa003
SciCrunch record: RRID:SCR_003070
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Prism
DOI: 10.7554/eLife.47084
Resource: GraphPad Prism (RRID:SCR_002798)
Curator: @Naa003
SciCrunch record: RRID:SCR_002798
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Anti-rabbit IgG HRP
DOI: 10.7554/eLife.47084
Resource: (Jackson ImmunoResearch Labs Cat# 711-035-152, RRID:AB_10015282)
Curator: @Naa003
SciCrunch record: RRID:AB_10015282
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Calnexin
DOI: 10.7554/eLife.47084
Resource: (Abcam Cat# ab22595, RRID:AB_2069006)
Curator: @Naa003
SciCrunch record: RRID:AB_2069006
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Flag
DOI: 10.7554/eLife.47084
Resource: (Sigma-Aldrich Cat# F1804, RRID:AB_262044)
Curator: @Naa003
SciCrunch record: RRID:AB_262044
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CHOP
DOI: 10.7554/eLife.47084
Resource: (Cell Signaling Technology Cat# 2895, RRID:AB_2089254)
Curator: @Naa003
SciCrunch record: RRID:AB_2089254
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Cleaved caspase-3
DOI: 10.7554/eLife.47084
Resource: (Cell Signaling Technology Cat# 9664, RRID:AB_2070042)
Curator: @Naa003
SciCrunch record: RRID:AB_2070042
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BiP
DOI: 10.7554/eLife.47084
Resource: (Cell Signaling Technology Cat# 3177, RRID:AB_2119845)
Curator: @Naa003
SciCrunch record: RRID:AB_2119845
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ATF4
DOI: 10.7554/eLife.47084
Resource: (Cell Signaling Technology Cat# 11815, RRID:AB_2616025)
Curator: @Naa003
SciCrunch record: RRID:AB_2616025
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COXIV
DOI: 10.7554/eLife.47084
Resource: (Cell Signaling Technology Cat# 4850, RRID:AB_2085424)
Curator: @Naa003
SciCrunch record: RRID:AB_2085424
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Cytochrome-C
DOI: 10.7554/eLife.47084
Resource: (Cell Signaling Technology Cat# 11940, RRID:AB_2637071)
Curator: @Naa003
SciCrunch record: RRID:AB_2637071
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BAX
DOI: 10.7554/eLife.47084
Resource: (Cell Signaling Technology Cat# 2772, RRID:AB_10695870)
Curator: @Naa003
SciCrunch record: RRID:AB_10695870
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IRE1α CD (rabbit monoclonal
DOI: 10.7554/eLife.47084
Resource: (Cell Signaling Technology Cat# 3294, RRID:AB_823545)
Curator: @Naa003
SciCrunch record: RRID:AB_823545
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GAPDH-HRP
DOI: 10.7554/eLife.47084
Resource: (Cell Signaling Technology Cat# 2118, RRID:AB_561053)
Curator: @Naa003
SciCrunch record: RRID:AB_561053
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elifesciences.org elifesciences.org
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DESeq2
DOI: 10.7554/eLife.43668
Resource: DESeq2 (RRID:SCR_015687)
Curator: @Naa003
SciCrunch record: RRID:SCR_015687
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R
DOI: 10.7554/eLife.43668
Resource: R Project for Statistical Computing (RRID:SCR_001905)
Curator: @Naa003
SciCrunch record: RRID:SCR_001905
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GSEA
DOI: 10.7554/eLife.43668
Resource: Gene Set Enrichment Analysis (RRID:SCR_003199)
Curator: @Naa003
SciCrunch record: RRID:SCR_003199
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MEME
DOI: 10.7554/eLife.43668
Resource: MEME Suite - Motif-based sequence analysis tools (RRID:SCR_001783)
Curator: @Naa003
SciCrunch record: RRID:SCR_001783
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elifesciences.org elifesciences.org
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Presentation
DOI: 10.7554/eLife.46831
Resource: Presentation (RRID:SCR_002521)
Curator: @Naa003
SciCrunch record: RRID:SCR_002521
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fmriPower
DOI: 10.7554/eLife.46831
Resource: FMRIpower (RRID:SCR_009576)
Curator: @Naa003
SciCrunch record: RRID:SCR_009576
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elifesciences.org elifesciences.org
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Image J
DOI: 10.7554/eLife.46689
Resource: ImageJ (RRID:SCR_003070)
Curator: @Naa003
SciCrunch record: RRID:SCR_003070
Tags
Annotators
URL
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elifesciences.org elifesciences.org
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Prism
DOI: 10.7554/eLife.47434
Resource: GraphPad Prism (RRID:SCR_002798)
Curator: @Naa003
SciCrunch record: RRID:SCR_002798
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pCLAMP
DOI: 10.7554/eLife.47434
Resource: pClamp (RRID:SCR_011323)
Curator: @Naa003
SciCrunch record: RRID:SCR_011323
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Mathematica
DOI: 10.7554/eLife.47434
Resource: Wolfram Mathematica (RRID:SCR_014448)
Curator: @Naa003
SciCrunch record: RRID:SCR_014448
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Axograph
DOI: 10.7554/eLife.47434
Resource: Axograph (RRID:SCR_014284)
Curator: @Naa003
SciCrunch record: RRID:SCR_014284
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elifesciences.org elifesciences.org
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NIS-Elements
DOI: 10.7554/eLife.47646
Resource: NIS-Elements (RRID:SCR_014329)
Curator: @Naa003
SciCrunch record: RRID:SCR_014329
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Addgene (#26001
DOI: 10.7554/eLife.47646
Resource: RRID:Addgene_26001
Curator: @Naa003
SciCrunch record: RRID:Addgene_26001
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elifesciences.org elifesciences.org
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Adobe Photoshop
DOI: 10.7554/eLife.45145
Resource: Adobe Photoshop (RRID:SCR_014199)
Curator: @Naa003
SciCrunch record: RRID:SCR_014199
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R
DOI: 10.7554/eLife.45145
Resource: R Project for Statistical Computing (RRID:SCR_001905)
Curator: @Naa003
SciCrunch record: RRID:SCR_001905
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Adobe Illustrator
DOI: 10.7554/eLife.45145
Resource: Adobe Illustrator (RRID:SCR_010279)
Curator: @Naa003
SciCrunch record: RRID:SCR_010279
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FIJI
DOI: 10.7554/eLife.45145
Resource: Fiji (RRID:SCR_002285)
Curator: @Naa003
SciCrunch record: RRID:SCR_002285
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elifesciences.org elifesciences.org
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Microsoft Excel
DOI: 10.7554/eLife.48660
Resource: Microsoft Excel (RRID:SCR_016137)
Curator: @Naa003
SciCrunch record: RRID:SCR_016137
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Imaris
DOI: 10.7554/eLife.48660
Resource: Imaris (RRID:SCR_007370)
Curator: @Naa003
SciCrunch record: RRID:SCR_007370
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Adobe Illustrator
DOI: 10.7554/eLife.48660
Resource: Adobe Illustrator (RRID:SCR_010279)
Curator: @Naa003
SciCrunch record: RRID:SCR_010279
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Image J
DOI: 10.7554/eLife.48660
Resource: ImageJ (RRID:SCR_003070)
Curator: @Naa003
SciCrunch record: RRID:SCR_003070
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FIJI
DOI: 10.7554/eLife.48660
Resource: Fiji (RRID:SCR_002285)
Curator: @Naa003
SciCrunch record: RRID:SCR_002285
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GraphPad Prism
DOI: 10.7554/eLife.48660
Resource: GraphPad Prism (RRID:SCR_002798)
Curator: @Naa003
SciCrunch record: RRID:SCR_002798
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R
DOI: 10.7554/eLife.48660
Resource: R Project for Statistical Computing (RRID:SCR_001905)
Curator: @Naa003
SciCrunch record: RRID:SCR_001905
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Cell Ranger Single Cell
DOI: 10.7554/eLife.48660
Resource: Cell Ranger (RRID:SCR_017344)
Curator: @Naa003
SciCrunch record: RRID:SCR_017344
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Seurat
DOI: 10.7554/eLife.48660
Resource: SEURAT (RRID:SCR_007322)
Curator: @Naa003
SciCrunch record: RRID:SCR_007322
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elifesciences.org elifesciences.org
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RRID:AB_2315069
DOI: 10.7554/eLife.20898
Resource: (Covance Cat# PAX6, RRID:AB_2315069)
Curator: @scibot
SciCrunch record: RRID:AB_2315069
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RRID:AB_477163
DOI: 10.7554/eLife.20898
Resource: (Sigma-Aldrich Cat# L9393, RRID:AB_477163)
Curator: @scibot
SciCrunch record: RRID:AB_477163
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RRID:AB_2107112
DOI: 10.7554/eLife.20898
Resource: (Everest Biotech Cat# EB05226, RRID:AB_2107112)
Curator: @scibot
SciCrunch record: RRID:AB_2107112
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elifesciences.org elifesciences.org
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RRID:AB_329827
DOI: 10.7554/eLife.16807
Resource: (Cell Signaling Technology Cat# 9272, RRID:AB_329827)
Curator: @scibot
SciCrunch record: RRID:AB_329827
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RRID:AB_331578
DOI: 10.7554/eLife.16807
Resource: (Cell Signaling Technology Cat# 3021, RRID:AB_331578)
Curator: @scibot
SciCrunch record: RRID:AB_331578
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RRID:AB_2269804
DOI: 10.7554/eLife.16807
Resource: (Cell Signaling Technology Cat# 9209, RRID:AB_2269804)
Curator: @scibot
SciCrunch record: RRID:AB_2269804
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elifesciences.org elifesciences.org
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RRID:IMSR_JAX:004595
DOI: 10.7554/eLife.38744
Resource: (IMSR Cat# JAX_004595,RRID:IMSR_JAX:004595)
Curator: @scibot
SciCrunch record: RRID:IMSR_JAX:004595
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RRID:CVCL_1926
DOI: 10.7554/eLife.38744
Resource: (ATCC Cat# CRL-11268, RRID:CVCL_1926)
Curator: @scibot
SciCrunch record: RRID:CVCL_1926
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elifesciences.org elifesciences.org
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RRID:SCR_007777
DOI: 10.7554/eLife.19993
Resource: MEROPS (RRID:SCR_007777)
Curator: @scibot
SciCrunch record: RRID:SCR_007777
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RRID:SCR_014631
DOI: 10.7554/eLife.19993
Resource: FATCAT (RRID:SCR_014631)
Curator: @scibot
SciCrunch record: RRID:SCR_014631
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RRID:SCR_004642
DOI: 10.7554/eLife.19993
Resource: ModBase (RRID:SCR_004642)
Curator: @scibot
SciCrunch record: RRID:SCR_004642
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elifesciences.org elifesciences.org
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AB_2534069
DOI: 10.7554/eLife.17361
Resource: (Thermo Fisher Scientific Cat# A-11001, RRID:AB_2534069)
Curator: @scibot
SciCrunch record: RRID:AB_2534069
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AB_2216046
DOI: 10.7554/eLife.17361
Resource: (Proteintech Cat# 11558-1-AP, RRID:AB_2216046)
Curator: @scibot
SciCrunch record: RRID:AB_2216046
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AB_10000548
DOI: 10.7554/eLife.17361
Resource: (Novus Cat# NB100-1612, RRID:AB_10000548)
Curator: @scibot
SciCrunch record: RRID:AB_10000548
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elifesciences.org elifesciences.org
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plasmid_22036
DOI: 10.7554/eLife.30224
Resource: RRID:Addgene_22036
Curator: @scibot
SciCrunch record: RRID:Addgene_22036
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plasmid_39196
DOI: 10.7554/eLife.30224
Resource: RRID:Addgene_39196
Curator: @scibot
SciCrunch record: RRID:Addgene_39196
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elifesciences.org elifesciences.org
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RRID:SCR_006646
DOI: 10.7554/eLife.19760
Resource: BEDTools (RRID:SCR_006646)
Curator: @scibot
SciCrunch record: RRID:SCR_006646
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RRID:SCR_013575
DOI: 10.7554/eLife.19760
Resource: Agilent Technologies (RRID:SCR_013575)
Curator: @scibot
SciCrunch record: RRID:SCR_013575
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RRID:SCR_005476
DOI: 10.7554/eLife.19760
Resource: Bowtie (RRID:SCR_005476)
Curator: @scibot
SciCrunch record: RRID:SCR_005476
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RRID:SCR_002577
DOI: 10.7554/eLife.19760
Resource: scikit-learn (RRID:SCR_002577)
Curator: @scibot
SciCrunch record: RRID:SCR_002577
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elifesciences.org elifesciences.org
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RRID:AB_2534017
DOI: 10.7554/eLife.49818
Resource: (Thermo Fisher Scientific Cat# A10042, RRID:AB_2534017)
Curator: @scibot
SciCrunch record: RRID:AB_2534017
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RRID:AB_2077789
DOI: 10.7554/eLife.49818
Resource: (R and D Systems Cat# AF1002, RRID:AB_2077789)
Curator: @scibot
SciCrunch record: RRID:AB_2077789
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RRID:AB_2212507
DOI: 10.7554/eLife.49818
Resource: (Cell Signaling Technology Cat# 2479, RRID:AB_2212507)
Curator: @scibot
SciCrunch record: RRID:AB_2212507
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RRID:AB_2533714
DOI: 10.7554/eLife.49818
Resource: (Thermo Fisher Scientific Cat# 44-660G, RRID:AB_2533714)
Curator: @scibot
SciCrunch record: RRID:AB_2533714
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RRID:AB_355500
DOI: 10.7554/eLife.49818
Resource: (R and D Systems Cat# AF644, RRID:AB_355500)
Curator: @scibot
SciCrunch record: RRID:AB_355500
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RRID:AB_331377
DOI: 10.7554/eLife.49818
Resource: (Cell Signaling Technology Cat# 2478, RRID:AB_331377)
Curator: @scibot
SciCrunch record: RRID:AB_331377
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elifesciences.org elifesciences.org
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RRID:SCR_012802
DOI: 10.7554/eLife.38675
Resource: edgeR (RRID:SCR_012802)
Curator: @scibot
SciCrunch record: RRID:SCR_012802
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RRID:SCR_000432
DOI: 10.7554/eLife.38675
Resource: RStudio (RRID:SCR_000432)
Curator: @scibot
SciCrunch record: RRID:SCR_000432
Tags
Annotators
URL
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elifesciences.org elifesciences.org
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RRID:CVCL_0544
DOI: 10.7554/eLife.27301
Resource: (ATCC Cat# CCL-233, RRID:CVCL_0544)
Curator: @scibot
SciCrunch record: RRID:CVCL_0544
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RRID:AB_561317
DOI: 10.7554/eLife.27301
Resource: (Cell Signaling Technology Cat# 4508, RRID:AB_561317)
Curator: @scibot
SciCrunch record: RRID:AB_561317
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RRID:CVCL_0504
DOI: 10.7554/eLife.27301
Resource: (ATCC Cat# CRL-2577, RRID:CVCL_0504)
Curator: @scibot
SciCrunch record: RRID:CVCL_0504
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RRID:CVCL_0399
DOI: 10.7554/eLife.27301
Resource: (CLS Cat# 300266/p487_LOVO, RRID:CVCL_0399)
Curator: @scibot
SciCrunch record: RRID:CVCL_0399
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elifesciences.org elifesciences.org
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RRID:SCR_003032
DOI: 10.7554/eLife.18825
Resource: Cytoscape (RRID:SCR_003032)
Curator: @scibot
SciCrunch record: RRID:SCR_003032
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RRID:SCR_005736
DOI: 10.7554/eLife.18825
Resource: BiNGO: A Biological Networks Gene Ontology tool (RRID:SCR_005736)
Curator: @scibot
SciCrunch record: RRID:SCR_005736
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RRID:CVCL_0007
DOI: 10.7554/eLife.18825
Resource: (JCRB Cat# IFO50038, RRID:CVCL_0007)
Curator: @scibot
SciCrunch record: RRID:CVCL_0007
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RRID:CVCL_0030
DOI: 10.7554/eLife.18825
Resource: (BCRC Cat# 60005, RRID:CVCL_0030)
Curator: @scibot
SciCrunch record: RRID:CVCL_0030
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RRID:CVCL_1926
DOI: 10.7554/eLife.18825
Resource: (ATCC Cat# CRL-11268, RRID:CVCL_1926)
Curator: @scibot
SciCrunch record: RRID:CVCL_1926
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elifesciences.org elifesciences.org
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RRID:CVCL_0598
DOI: 10.7554/eLife.17548
Resource: (ATCC Cat# CRL-10317, RRID:CVCL_0598)
Curator: @scibot
SciCrunch record: RRID:CVCL_0598
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RRID:CVCL_G144
DOI: 10.7554/eLife.17548
Resource: (ATCC Cat# HB-8730, RRID:CVCL_G144)
Curator: @scibot
SciCrunch record: RRID:CVCL_G144
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elifesciences.org elifesciences.org
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plasmid_28179
DOI: 10.7554/eLife.19720
Resource: RRID:Addgene_28179
Curator: @scibot
SciCrunch record: RRID:Addgene_28179
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elifesciences.org elifesciences.org
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RRID:SCR_001591
DOI: 10.7554/eLife.26876
Resource: Clustal Omega (RRID:SCR_001591)
Curator: @scibot
SciCrunch record: RRID:SCR_001591
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RRID:SCR_002811
DOI: 10.7554/eLife.26876
Resource: Gene Ontology (RRID:SCR_002811)
Curator: @scibot
SciCrunch record: RRID:SCR_002811
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RRID:SCR_012802
DOI: 10.7554/eLife.26876
Resource: edgeR (RRID:SCR_012802)
Curator: @scibot
SciCrunch record: RRID:SCR_012802
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RRID:SCR_002987
DOI: 10.7554/eLife.26876
Resource: BioMart Project (RRID:SCR_002987)
Curator: @scibot
SciCrunch record: RRID:SCR_002987
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elifesciences.org elifesciences.org
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RRID:SCR_013035
DOI: 10.7554/eLife.20542
Resource: TopHat (RRID:SCR_013035)
Curator: @scibot
SciCrunch record: RRID:SCR_013035
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elifesciences.org elifesciences.org
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RRID:SCR_006440
DOI: 10.7554/eLife.22901
Resource: NIST - National Institute of Standards and Technology (RRID:SCR_006440)
Curator: @scibot
SciCrunch record: RRID:SCR_006440
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elifesciences.org elifesciences.org
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RRID:AB_10804039
DOI: 10.7554/eLife.44360
Resource: (Thermo Fisher Scientific Cat# 12-0089-42, RRID:AB_10804039)
Curator: @scibot
SciCrunch record: RRID:AB_10804039
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RRID:AB_10548513
DOI: 10.7554/eLife.44360
Resource: (Thermo Fisher Scientific Cat# 45-0037-42, RRID:AB_10548513)
Curator: @scibot
SciCrunch record: RRID:AB_10548513
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RRID:AB_10597597
DOI: 10.7554/eLife.44360
Resource: (Thermo Fisher Scientific Cat# 11-0149-42, RRID:AB_10597597)
Curator: @scibot
SciCrunch record: RRID:AB_10597597
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elifesciences.org elifesciences.org
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RRID:AB_528428
DOI: 10.7554/eLife.15461
Resource: (DSHB Cat# pax7, RRID:AB_528428)
Curator: @scibot
SciCrunch record: RRID:AB_528428
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elifesciences.org elifesciences.org
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RRID:AB_2556786
DOI: 10.7554/eLife.32032
Resource: (Thermo Fisher Scientific Cat# W10804, RRID:AB_2556786)
Curator: @scibot
SciCrunch record: RRID:AB_2556786
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RRID:SCR_014246
DOI: 10.7554/eLife.32032
Resource: ImageQuant (RRID:SCR_014246)
Curator: @scibot
SciCrunch record: RRID:SCR_014246
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elifesciences.org elifesciences.org
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SCR_011853
DOI: 10.7554/eLife.22939
Resource: CLC Genomics Workbench (RRID:SCR_011853)
Curator: @scibot
SciCrunch record: RRID:SCR_011853
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SCR_011853
DOI: 10.7554/eLife.22939
Resource: CLC Genomics Workbench (RRID:SCR_011853)
Curator: @scibot
SciCrunch record: RRID:SCR_011853
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SCR_011853
DOI: 10.7554/eLife.22939
Resource: CLC Genomics Workbench (RRID:SCR_011853)
Curator: @scibot
SciCrunch record: RRID:SCR_011853
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elifesciences.org elifesciences.org
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RRID:SCR_008520
DOI: 10.7554/eLife.64148
Resource: FlowJo (RRID:SCR_008520)
Curator: @scibot
SciCrunch record: RRID:SCR_008520
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RRID:SCR_011793
DOI: 10.7554/eLife.64148
Resource: Integrative Genomics Viewer (RRID:SCR_011793)
Curator: @scibot
SciCrunch record: RRID:SCR_011793
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elifesciences.org elifesciences.org
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RRID:AB_10975474
DOI: 10.7554/eLife.36158
Resource: (Abcam Cat# ab124827, RRID:AB_10975474)
Curator: @Naa003
SciCrunch record: RRID:AB_10975474
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elifesciences.org elifesciences.org
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RRID:AB_297852
DOI: 10.7554/eLife.38992
Resource: (Abcam Cat# ab11213, RRID:AB_297852)
Curator: @evieth
SciCrunch record: RRID:AB_297852
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elifesciences.org elifesciences.org
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RRID:CVCL_0224
DOI: 10.7554/eLife.45306
Resource: (BCRC Cat# 60094, RRID:CVCL_0224)
Curator: @ethanbadger
SciCrunch record: RRID:CVCL_0224
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elifesciences.org elifesciences.org
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Addgene plasmid #1817
DOI: 10.7554/eLife.48363
Resource: RRID:Addgene_1817
Curator: @Naa003
SciCrunch record: RRID:Addgene_1817
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elifesciences.org elifesciences.org
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Jackson Laboratory, Stock #000664
DOI: 10.7554/eLife.49180
Resource: (IMSR Cat# JAX_000664,RRID:IMSR_JAX:000664)
Curator: @Naa003
SciCrunch record: RRID:IMSR_JAX:000664
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www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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RRID:Addgene_49410
DOI: 10.7554/eLife.46592
Resource: RRID:Addgene_49410
Curator: @Naa003
SciCrunch record: RRID:Addgene_49410
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elifesciences.org elifesciences.org
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RRID:AB_2811127
DOI: 10.7554/eLife.48191
Resource: (Novus Cat# NBP2-20564, RRID:AB_2811127)
Curator: @Naa003
SciCrunch record: RRID:AB_2811127
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elifesciences.org elifesciences.org
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RRID: WB-STRAIN:PTM288
DOI: 10.7554/eLife.48119
Resource: (WB Cat# PTM288,RRID:WB-STRAIN:PTM288)
Curator: @Naa003
SciCrunch record: RRID:WB-STRAIN:PTM288
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RRID: WB-STRAIN:CX12311
DOI: 10.7554/eLife.48119
Resource: (WB Cat# CX12311,RRID:WB-STRAIN:CX12311)
Curator: @Naa003
SciCrunch record: RRID:WB-STRAIN:CX12311
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RRID: WB-STRAIN:OP50
DOI: 10.7554/eLife.48119
Resource: (WB Cat# OP50,RRID:WB-STRAIN:OP50)
Curator: @Naa003
SciCrunch record: RRID:WB-STRAIN:OP50
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elifesciences.org elifesciences.org
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RRID:SCR_007366
DOI: 10.7554/eLife.47566
Resource: FilamentTracer (RRID:SCR_007366)
Curator: @Naa003
SciCrunch record: RRID:SCR_007366
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elifesciences.org elifesciences.org
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RRID: AB_2661807
DOI: 10.7554/eLife.48051
Resource: (Fluidigm Cat# 3170001, RRID:AB_2661807)
Curator: @Naa003
SciCrunch record: RRID:AB_2661807
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Prism
DOI: 10.7554/eLife.48051
Resource: GraphPad Prism (RRID:SCR_002798)
Curator: @Naa003
SciCrunch record: RRID:SCR_002798
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ggplot2
DOI: 10.7554/eLife.48051
Resource: ggplot2 (RRID:SCR_014601)
Curator: @Naa003
SciCrunch record: RRID:SCR_014601
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R
DOI: 10.7554/eLife.48051
Resource: R Project for Statistical Computing (RRID:SCR_001905)
Curator: @Naa003
SciCrunch record: RRID:SCR_001905
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Definiens Developer XD
DOI: 10.7554/eLife.48051
Resource: Definiens Developer XD (RRID:SCR_014283)
Curator: @Naa003
SciCrunch record: RRID:SCR_014283
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Image J
DOI: 10.7554/eLife.48051
Resource: ImageJ (RRID:SCR_003070)
Curator: @Naa003
SciCrunch record: RRID:SCR_003070
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CellProfiler
DOI: 10.7554/eLife.48051
Resource: CellProfiler Image Analysis Software (RRID:SCR_007358)
Curator: @Naa003
SciCrunch record: RRID:SCR_007358
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Zen
DOI: 10.7554/eLife.48051
Resource: ZEN Digital Imaging for Light Microscopy (RRID:SCR_013672)
Curator: @Naa003
SciCrunch record: RRID:SCR_013672
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elifesciences.org elifesciences.org
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Addgene Plasmid #12263
DOI: 10.7554/eLife.48318
Resource: RRID:Addgene_12263
Curator: @Naa003
SciCrunch record: RRID:Addgene_12263
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elifesciences.org elifesciences.org
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Jackson Laboratories Stock #007909
DOI: 10.7554/eLife.49253
Resource: (IMSR Cat# JAX_007909,RRID:IMSR_JAX:007909)
Curator: @Naa003
SciCrunch record: RRID:IMSR_JAX:007909
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Jackson Laboratories Stock #003573
DOI: 10.7554/eLife.49253
Resource: (IMSR Cat# JAX_003573,RRID:IMSR_JAX:003573)
Curator: @Naa003
SciCrunch record: RRID:IMSR_JAX:003573
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elifesciences.org elifesciences.org
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RRID:AB_390918
DOI: 10.7554/eLife.49677
Resource: (Roche Cat# 11867423001, RRID:AB_390918)
Curator: @Naa003
SciCrunch record: RRID:AB_390918
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RRID:AB_2313567
DOI: 10.7554/eLife.49677
Resource: (Jackson ImmunoResearch Labs Cat# 111-035-003, RRID:AB_2313567)
Curator: @Naa003
SciCrunch record: RRID:AB_2313567
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RRID:AB_10015289
DOI: 10.7554/eLife.49677
Resource: (Yeasen Biotech Cat# 33201ES60, RRID:AB_10015289)
Curator: @Naa003
SciCrunch record: RRID:AB_10015289
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RRID:AB_2618386
DOI: 10.7554/eLife.49677
Resource: (DSHB Cat# P1C1-SCAR, RRID:AB_2618386)
Curator: @Naa003
SciCrunch record: RRID:AB_2618386
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RRID:AB_142018
DOI: 10.7554/eLife.49677
Resource: (Thermo Fisher Scientific Cat# A-11073, RRID:AB_2534117)
Curator: @Naa003
SciCrunch record: RRID:AB_142018
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RRID:AB_2534069
DOI: 10.7554/eLife.49677
Resource: (Thermo Fisher Scientific Cat# A-11001, RRID:AB_2534069)
Curator: @Naa003
SciCrunch record: RRID:AB_2534069
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RRID:AB_141874
DOI: 10.7554/eLife.49677
Resource: (Molecular Probes Cat# A-11077, RRID:AB_141874)
Curator: @Naa003
SciCrunch record: RRID:AB_141874
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RRID:AB_528161
DOI: 10.7554/eLife.49677
Resource: (DSHB Cat# 24B10, RRID:AB_528161)
Curator: @Naa003
SciCrunch record: RRID:AB_528161
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RRID:BDSC_14255
DOI: 10.7554/eLife.49677
Resource: (BDSC Cat# 14255,RRID:BDSC_14255)
Curator: @Naa003
SciCrunch record: RRID:BDSC_14255
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RRID:BDSC_8754
DOI: 10.7554/eLife.49677
Resource: (BDSC Cat# 8754,RRID:BDSC_8754)
Curator: @Naa003
SciCrunch record: RRID:BDSC_8754
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RRID:DGGR_109612
DOI: 10.7554/eLife.49677
Resource: (DGGR Cat# 109612,RRID:DGGR_109612)
Curator: @Naa003
SciCrunch record: RRID:DGGR_109612
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RRID:BDSC_28725
DOI: 10.7554/eLife.49677
Resource: (BDSC Cat# 28725,RRID:BDSC_28725)
Curator: @Naa003
SciCrunch record: RRID:BDSC_28725
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RRID:BDSC_36121
DOI: 10.7554/eLife.49677
Resource: (BDSC Cat# 36121,RRID:BDSC_36121)
Curator: @Naa003
SciCrunch record: RRID:BDSC_36121
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elifesciences.org elifesciences.org
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RRID:WB-STRAIN:TP12
DOI: 10.7554/eLife.43226
Resource: (WB Cat# TP12,RRID:WB-STRAIN:TP12)
Curator: @Naa003
SciCrunch record: RRID:WB-STRAIN:TP12
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elifesciences.org elifesciences.org
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Addgene 42230
DOI: 10.7554/eLife.45542
Resource: RRID:Addgene_42230
Curator: @Naa003
SciCrunch record: RRID:Addgene_42230
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RRID: AB_2534079
DOI: 10.7554/eLife.45542
Resource: (Thermo Fisher Scientific Cat# A-11012, RRID:AB_2534079)
Curator: @Naa003
SciCrunch record: RRID:AB_2534079
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elifesciences.org elifesciences.org
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plasmid #35432
DOI: 10.7554/eLife.48625
Resource: RRID:Addgene_35432
Curator: @Naa003
SciCrunch record: RRID:Addgene_35432
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plasmid #12260
DOI: 10.7554/eLife.48625
Resource: RRID:Addgene_12260
Curator: @Naa003
SciCrunch record: RRID:Addgene_12260
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elifesciences.org elifesciences.org
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BDSC_68371
DOI: 10.7554/eLife.46839
Resource: (BDSC Cat# 68371,RRID:BDSC_68371)
Curator: @Naa003
SciCrunch record: RRID:BDSC_68371
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BDSC_66480
DOI: 10.7554/eLife.46839
Resource: (BDSC Cat# 66480,RRID:BDSC_66480)
Curator: @Naa003
SciCrunch record: RRID:BDSC_66480
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BDSC_30026
DOI: 10.7554/eLife.46839
Resource: (BDSC Cat# 30026,RRID:BDSC_30026)
Curator: @Naa003
SciCrunch record: RRID:BDSC_30026
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BDSC_48228
DOI: 10.7554/eLife.46839
Resource: (BDSC Cat# 48228,RRID:BDSC_48228)
Curator: @Naa003
SciCrunch record: RRID:BDSC_48228
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elifesciences.org elifesciences.org
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GraphPad-Prism
DOI: 10.7554/eLife.49673
Resource: GraphPad Prism (RRID:SCR_002798)
Curator: @Naa003
SciCrunch record: RRID:SCR_002798
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HEK293 cells
DOI: 10.7554/eLife.49673
Resource: (IZSLER Cat# BS CL 129, RRID:CVCL_0045)
Curator: @Naa003
SciCrunch record: RRID:CVCL_0045
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bedtools
DOI: 10.7554/eLife.49673
Resource: BEDTools (RRID:SCR_006646)
Curator: @Naa003
SciCrunch record: RRID:SCR_006646
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crossmap
DOI: 10.7554/eLife.49673
Resource: CrossMap (RRID:SCR_001173)
Curator: @Naa003
SciCrunch record: RRID:SCR_001173
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Bedops
DOI: 10.7554/eLife.49673
Resource: BEDOPS (RRID:SCR_012865)
Curator: @Naa003
SciCrunch record: RRID:SCR_012865
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BWA
DOI: 10.7554/eLife.49673
Resource: BWA (RRID:SCR_010910)
Curator: @Naa003
SciCrunch record: RRID:SCR_010910
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EBSeq
DOI: 10.7554/eLife.49673
Resource: EBSeq (RRID:SCR_003526)
Curator: @Naa003
SciCrunch record: RRID:SCR_003526
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clusterProfiler
DOI: 10.7554/eLife.49673
Resource: clusterProfiler (RRID:SCR_016884)
Curator: @Naa003
SciCrunch record: RRID:SCR_016884
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STAR
DOI: 10.7554/eLife.49673
Resource: STAR (RRID:SCR_015899)
Curator: @Naa003
SciCrunch record: RRID:SCR_015899
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RSEM
DOI: 10.7554/eLife.49673
Resource: RSEM (RRID:SCR_013027)
Curator: @Naa003
SciCrunch record: RRID:SCR_013027
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Cutadapt
DOI: 10.7554/eLife.49673
Resource: cutadapt (RRID:SCR_011841)
Curator: @Naa003
SciCrunch record: RRID:SCR_011841
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RSeQC
DOI: 10.7554/eLife.49673
Resource: RSeQC (RRID:SCR_005275)
Curator: @Naa003
SciCrunch record: RRID:SCR_005275
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Picard
DOI: 10.7554/eLife.49673
Resource: Picard (RRID:SCR_006525)
Curator: @Naa003
SciCrunch record: RRID:SCR_006525
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FastQC
DOI: 10.7554/eLife.49673
Resource: FastQC (RRID:SCR_014583)
Curator: @Naa003
SciCrunch record: RRID:SCR_014583
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elifesciences.org elifesciences.org
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Integrative Genomics Viewer
DOI: 10.7554/eLife.48725
Resource: Integrative Genomics Viewer (RRID:SCR_011793)
Curator: @Naa003
SciCrunch record: RRID:SCR_011793
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Microsoft Excel
DOI: 10.7554/eLife.48725
Resource: Microsoft Excel (RRID:SCR_016137)
Curator: @Naa003
SciCrunch record: RRID:SCR_016137
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R
DOI: 10.7554/eLife.48725
Resource: R Project for Statistical Computing (RRID:SCR_001905)
Curator: @Naa003
SciCrunch record: RRID:SCR_001905
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ProSight Lite
DOI: 10.7554/eLife.48725
Resource: ProSight Lite (RRID:SCR_016908)
Curator: @Naa003
SciCrunch record: RRID:SCR_016908
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Image J
DOI: 10.7554/eLife.48725
Resource: ImageJ (RRID:SCR_003070)
Curator: @Naa003
SciCrunch record: RRID:SCR_003070
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R-Studio
DOI: 10.7554/eLife.48725
Resource: RStudio (RRID:SCR_000432)
Curator: @Naa003
SciCrunch record: RRID:SCR_000432
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ggplot2
DOI: 10.7554/eLife.48725
Resource: ggplot2 (RRID:SCR_014601)
Curator: @Naa003
SciCrunch record: RRID:SCR_014601
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elifesciences.org elifesciences.org
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ImageJ
DOI: 10.7554/eLife.46500
Resource: ImageJ (RRID:SCR_003070)
Curator: @Naa003
SciCrunch record: RRID:SCR_003070
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Addgene: pMJ806
DOI: 10.7554/eLife.46500
Resource: RRID:Addgene_39312
Curator: @Naa003
SciCrunch record: RRID:Addgene_39312
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SpyCas9
DOI: 10.7554/eLife.46500
Resource: (Abcam Cat# ab191468, RRID:AB_2692325)
Curator: @Naa003
SciCrunch record: RRID:AB_2692325
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lentiCRISPR-EGFP sgRNA 1 (WT Cas9)
DOI: 10.7554/eLife.46500
Resource: RRID:Addgene_51760
Curator: @Naa003
SciCrunch record: RRID:Addgene_51760
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pLenti CMV GFP Puro
DOI: 10.7554/eLife.46500
Resource: RRID:Addgene_17448
Curator: @Naa003
SciCrunch record: RRID:Addgene_17448
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elifesciences.org elifesciences.org
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Dryad
DOI: 10.7554/eLife.47837
Resource: Dryad Digital Repository (RRID:SCR_005910)
Curator: @Naa003
SciCrunch record: RRID:SCR_005910
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