8 Matching Annotations
  1. Jul 2023
      • Title
        • The landscape of biomedical research
      • Authors
        • Rita González-Márquez,
        • Luca Schmidt,
        • Benjamin M. Schmidt,
        • Philipp Berens
        • Dmitry Kobak
      • Date
        • April 11, 2023
      • Source
      • Abstract
        • The number of publications in biomedicine and life sciences
        • has rapidly grown over the last decades,
        • with over 1.5 million papers now published every year.
        • This makes it difficult to
          • keep track of new scientific works and
          • to have an overview of the evolution of the field as a whole.
        • Here we
          • present a 2D atlas of the entire corpus of biomedical literature, and
          • argue that it provides
            • a unique and
            • useful overview
          • of the life sciences research.
        • We base our atlas on the abstract texts of
        • 21 million English articles from the PubMed database.
        • To embed the abstracts into 2D, we use
          • a large language model PubMedBERT, combined with
          • t-SNE tailored to handle samples of our size.
        • We use our atlas to study
          • the emergence of the Covid-19 literature,
          • the evolution of the neuroscience discipline,
          • the uptake of machine learning, and
          • the distribution of gender imbalance in academic authorship.
        • Furthermore, we present an interactive web version of our atlas that
          • allows easy exploration and
          • will enable further insights and facilitate future research.
  2. Aug 2022
  3. Oct 2020
  4. Sep 2020
  5. Aug 2020
  6. Jul 2020