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Bengalese finc
smth about them not heavily relying on vocal cues? check class notes; very ltitle research supporting somatosensory reinforcement
neural systems that support vocal plasticity across species.
relevance of this paper
both this circuit and its dopaminergic inputs are necessary for non-auditory vocal learning
basal ganglia and dopaminergic inputs aer needed for non auditory vocal learnign
reinforcement learning paradigm
Recorded bird’s song for 3 days without interference/feedback Analyzed the pitch of each syllable during this to know its normal pitch range (distribution) Selected a target syllable with consistent and measurable pitch pattern Pitch threshold was set based on pitch distribution
BL21
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DOI: 10.7554/eLife.93312
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Curator: @scibot
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DOI: 10.7554/eLife.93312
Resource: (Thermo Fisher Scientific Cat# A-21121, RRID:AB_2535764)
Curator: @scibot
SciCrunch record: RRID:AB_2535764
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DOI: 10.7554/eLife.93312
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Curator: @scibot
SciCrunch record: RRID:AB_2535777
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DOI: 10.7554/eLife.93312
Resource: (Abcam Cat# ab57602, RRID:AB_2142624)
Curator: @scibot
SciCrunch record: RRID:AB_2142624
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DOI: 10.7554/eLife.93312
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Curator: @scibot
SciCrunch record: RRID:AB_2619742
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DOI: 10.7554/eLife.93312
Resource: (Abcam Cat# ab110413, RRID:AB_2629281)
Curator: @scibot
SciCrunch record: RRID:AB_2629281
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DOI: 10.7554/eLife.93312
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Curator: @scibot
SciCrunch record: RRID:AB_476743
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DOI: 10.7554/eLife.93312
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Curator: @scibot
SciCrunch record: RRID:AB_2338476
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DOI: 10.7554/eLife.92854.3
Resource: RRID:Addgene_20298
Curator: @scibot
SciCrunch record: RRID:Addgene_20298
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DOI: 10.7554/eLife.92854.3
Resource: RRID:Addgene_20297
Curator: @scibot
SciCrunch record: RRID:Addgene_20297
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Curator: @scibot
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DOI: 10.7554/eLife.92737.2
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Curator: @scibot
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DOI: 10.7554/eLife.92737.2
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Curator: @scibot
SciCrunch record: RRID:AB_143165
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DOI: 10.7554/eLife.89725
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Curator: @scibot
SciCrunch record: RRID:Addgene_74942
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DOI: 10.7554/eLife.89725
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Curator: @scibot
SciCrunch record: RRID:AB_2115160
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DOI: 10.7554/eLife.89725
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DOI: 10.7554/eLife.89725
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Curator: @scibot
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DOI: 10.7554/eLife.89725
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Curator: @scibot
SciCrunch record: RRID:AB_2265207
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DOI: 10.7554/eLife.89725
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DOI: 10.7554/eLife.89725
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Curator: @scibot
SciCrunch record: RRID:AB_2218911
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DOI: 10.7554/eLife.89725
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Curator: @scibot
SciCrunch record: RRID:AB_628288
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DOI: 10.7554/eLife.89725
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Curator: @scibot
SciCrunch record: RRID:AB_2195767
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DOI: 10.7554/eLife.89725
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Curator: @scibot
SciCrunch record: RRID:AB_2251034
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DOI: 10.7554/eLife.89725
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Curator: @scibot
SciCrunch record: RRID:AB_397555
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DOI: 10.7554/eLife.89725
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Curator: @scibot
SciCrunch record: RRID:AB_2100313
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DOI: 10.7554/eLife.89725
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SciCrunch record: RRID:CVCL_Y803
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DOI: 10.7554/eLife.89725
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Curator: @scibot
SciCrunch record: RRID:AB_2147464
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DOI: 10.7554/eLife.89725
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Curator: @scibot
SciCrunch record: RRID:AB_2100309
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DOI: 10.7554/eLife.89725
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Curator: @scibot
SciCrunch record: RRID:CVCL_B207
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DOI: 10.7554/eLife.102184.1
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Curator: @scibot
SciCrunch record: RRID:AB_2534088
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DOI: 10.7554/eLife.102184.1
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Curator: @scibot
SciCrunch record: RRID:AB_2201528
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DOI: 10.7554/eLife.102184.1
Resource: MATLAB (RRID:SCR_001622)
Curator: @scibot
SciCrunch record: RRID:SCR_001622
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DOI: 10.7554/eLife.102184.1
Resource: GraphPad Prism (RRID:SCR_002798)
Curator: @scibot
SciCrunch record: RRID:SCR_002798
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DOI: 10.7554/eLife.102184.1
Resource: pClamp (RRID:SCR_011323)
Curator: @scibot
SciCrunch record: RRID:SCR_011323
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DOI: 10.7554/eLife.101736.1
Resource: RRID:Addgene_50475
Curator: @scibot
SciCrunch record: RRID:Addgene_50475
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DOI: 10.7554/eLife.101736.1
Resource: Synapse Web Reconstruct (RRID:SCR_002716)
Curator: @scibot
SciCrunch record: RRID:SCR_002716
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DOI: 10.7554/eLife.101736.1
Resource: (IMSR Cat# JAX_007788,RRID:IMSR_JAX:007788)
Curator: @scibot
SciCrunch record: RRID:IMSR_JAX:007788
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DOI: 10.7554/eLife.101736.1
Resource: RRID:Addgene_44362
Curator: @scibot
SciCrunch record: RRID:Addgene_44362
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DOI: 10.7554/eLife.100879.1
Resource: (RRID:CVCL_B488)
Curator: @scibot
SciCrunch record: RRID:CVCL_B488
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DOI: 10.7554/eLife.100879.1
Resource: (BCRC Cat# 60556, RRID:CVCL_1940)
Curator: @scibot
SciCrunch record: RRID:CVCL_1940
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DOI: 10.7554/eLife.100404.1
Resource: NiLearn (RRID:SCR_001362)
Curator: @scibot
SciCrunch record: RRID:SCR_001362
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DOI: 10.7554/eLife.100404.1
Resource: FreeSurfer (RRID:SCR_001847)
Curator: @scibot
SciCrunch record: RRID:SCR_001847
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DOI: 10.7554/eLife.100404.1
Resource: Mindboggle (RRID:SCR_002438)
Curator: @scibot
SciCrunch record: RRID:SCR_002438
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DOI: 10.7554/eLife.100404.1
Resource: FSL (RRID:SCR_002823)
Curator: @scibot
SciCrunch record: RRID:SCR_002823
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DOI: 10.7554/eLife.100404.1
Resource: ICBM 152 Nonlinear atlases version 2009 (RRID:SCR_008796)
Curator: @scibot
SciCrunch record: RRID:SCR_008796
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DOI: 10.7554/eLife.100404.1
Resource: ANTS - Advanced Normalization ToolS (RRID:SCR_004757)
Curator: @scibot
SciCrunch record: RRID:SCR_004757
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DOI: 10.7554/eLife.100404.1
Resource: FMRIPREP (RRID:SCR_016216)
Curator: @scibot
SciCrunch record: RRID:SCR_016216
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DOI: 10.7554/eLife.100404.1
Resource: Nipype (RRID:SCR_002502)
Curator: @scibot
SciCrunch record: RRID:SCR_002502
catch trials
to ensure that learning actually occurred and it wasn't a fluke
although the magnitude of electric current varied by a large amount across individual birds,
a strength of the paper - adapted to the individual, standardized the effect or a limitation - not standardized shock magnitude
yet a short enough duration to avoid interfering with following song syllables
not noxious but significant enough to modulate behavior
target syllable
target syllable = syllable 'd' Fig. 2C - qualitatively can see a shift downward in the fundamental frequency during washout you can see the bird returning to its normal habits
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DOI: 10.7554/eLife.97662
Resource: (IMSR Cat# JAX_005975,RRID:IMSR_JAX:005975)
Curator: @dhovakimyan1
SciCrunch record: RRID:IMSR_JAX:005975
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DOI: 10.7554/eLife.97662
Resource: (IMSR Cat# JAX_005584,RRID:IMSR_JAX:005584)
Curator: @dhovakimyan1
SciCrunch record: RRID:IMSR_JAX:005584
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DOI: 10.7554/eLife.97662
Resource: G:Profiler (RRID:SCR_006809)
Curator: @scibot
SciCrunch record: RRID:SCR_006809
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DOI: 10.7554/eLife.97662
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Curator: @scibot
SciCrunch record: RRID:SCR_018145
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DOI: 10.7554/eLife.97662
Resource: SCR_022554
Curator: @scibot
SciCrunch record: RRID:SCR_022554
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DOI: 10.7554/eLife.97662
Resource: R Project for Statistical Computing (RRID:SCR_001905)
Curator: @scibot
SciCrunch record: RRID:SCR_001905
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DOI: 10.7554/eLife.97662
Resource: GraphPad Prism (RRID:SCR_002798)
Curator: @scibot
SciCrunch record: RRID:SCR_002798
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DOI: 10.7554/eLife.97662
Resource: GRatio for ImageJ (RRID:SCR_015580)
Curator: @scibot
SciCrunch record: RRID:SCR_015580
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DOI: 10.7554/eLife.97662
Resource: ImageJ (RRID:SCR_003070)
Curator: @scibot
SciCrunch record: RRID:SCR_003070
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DOI: 10.7554/eLife.97662
Resource: EnrichmentMap (RRID:SCR_016052)
Curator: @scibot
SciCrunch record: RRID:SCR_016052
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DOI: 10.7554/eLife.97662
Resource: Cytoscape (RRID:SCR_003032)
Curator: @scibot
SciCrunch record: RRID:SCR_003032
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DOI: 10.7554/eLife.97662
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Curator: @scibot
SciCrunch record: RRID:SCR_016418
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DOI: 10.7554/eLife.97662
Resource: SeuratWrappers (RRID:SCR_022555)
Curator: @scibot
SciCrunch record: RRID:SCR_022555
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DOI: 10.7554/eLife.97662
Resource: Seurat (RRID:SCR_016341)
Curator: @scibot
SciCrunch record: RRID:SCR_016341
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DOI: 10.7554/eLife.97662
Resource: Velocyto (RRID:SCR_018167)
Curator: @scibot
SciCrunch record: RRID:SCR_018167
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DOI: 10.7554/eLife.97662
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Curator: @scibot
SciCrunch record: RRID:SCR_023221
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DOI: 10.7554/eLife.97662
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Curator: @scibot
SciCrunch record: RRID:IMSR_JAX:007914
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DOI: 10.7554/eLife.97662
Resource: (IMSR Cat# JAX_005975,RRID:IMSR_JAX:005975)
Curator: @scibot
SciCrunch record: RRID:IMSR_JAX:005975
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DOI: 10.7554/eLife.97602.2
Resource: RRID:Addgene_51502
Curator: @scibot
SciCrunch record: RRID:Addgene_51502
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DOI: 10.7554/eLife.97602.2
Resource: RRID:Addgene_28306
Curator: @scibot
SciCrunch record: RRID:Addgene_28306
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DOI: 10.7554/eLife.97602.2
Resource: RRID:IMSR_JAX:030525
Curator: @scibot
SciCrunch record: RRID:IMSR_JAX:030525
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DOI: 10.7554/eLife.97602.2
Resource: (IMSR Cat# JAX_024109,RRID:IMSR_JAX:024109)
Curator: @scibot
SciCrunch record: RRID:IMSR_JAX:024109
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DOI: 10.7554/eLife.97602.2
Resource: RRID:IMSR_JAX:007909
Curator: @scibot
SciCrunch record: RRID:IMSR_JAX:007909
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DOI: 10.7554/eLife.97602.2
Resource: (MMRRC Cat# 030648-UCD,RRID:MMRRC_030648-UCD)
Curator: @scibot
SciCrunch record: RRID:MMRRC_030648-UCD
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DOI: 10.7554/eLife.97602.2
Resource: (MMRRC Cat# 037128-UCD,RRID:MMRRC_037128-UCD)
Curator: @scibot
SciCrunch record: RRID:MMRRC_037128-UCD
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DOI: 10.7554/eLife.97602.2
Resource: (MMRRC Cat# 041158-UCD,RRID:MMRRC_041158-UCD)
Curator: @scibot
SciCrunch record: RRID:MMRRC_041158-UCD
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DOI: 10.7554/eLife.97602.2
Resource: (IMSR Cat# JAX_009613,RRID:IMSR_JAX:009613)
Curator: @scibot
SciCrunch record: RRID:IMSR_JAX:009613
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DOI: 10.7554/eLife.97602.2
Resource: RRID:IMSR_JAX:022864
Curator: @scibot
SciCrunch record: RRID:IMSR_JAX:022864