1,171,893 Matching Annotations
  1. Oct 2024
    1. different trials, and the order of trials was completely rand

      not sure I get this. You mean that each face was rated twice? Once on woman continuum and once one man continuum, and order of all trials was random? If so, please clarify

    2. The morphs were made in 7 steps, from completely feminine to completely masculine

      can you share these images? Would be concrete. Also, would save time for others instead of reinventing the wheel.

    1. eLife Assessment

      This timely and important study used functional near-infrared spectroscopy hyperscanning to examine the neural correlates of how group identification influences collective behavior. The work provides incomplete evidence to indicate that the synchronization of brain activity between different people underlies collective performance and that changes in brain activity patterns within individuals may, in turn, underlie this between-person synchrony. This study will be of interest to researchers investigating the neuroscience of social behaviour.

    2. Reviewer #1 (Public review):

      Summary:

      The authors of this article have presented a timely and well-written study exploring the impact of group identification on collective behaviors and performance. The breadth of analyses is impressive and contributes significantly to our understanding of the collective performance. However, there are several areas where further clarification and revision would strengthen the study.

      Strengths:

      (1) Timeliness and Relevance:<br /> The topic is highly relevant, particularly in today's interconnected and team-oriented work environments. Triadic hyperscanning is important to understand group dynamics, but most previous work has been limited to dyadic work.

      (2) Comprehensive Analysis:<br /> The authors have conducted extensive analyses, offering valuable insights into how group identification affects collective behaviors.

      (3) Clear Writing:<br /> The manuscript is well-written and easy to follow, making complex concepts accessible.

      Weaknesses (clarifications needed):

      (1) Experimental Design:<br /> The study does not mention whether the authors examined sex differences or any measures of attractiveness or hierarchy among participants (e.g., students vs. teachers). Including these variables could provide a more nuanced understanding of group dynamics.

      (2) fNIRS Data Acquisition:<br /> The authors' approach to addressing individual differences in anatomy is lacking in detail. Understanding how they identified the optimal channels for synchrony between participants would be beneficial. Was this done by averaging to find the location with the highest coherence?

      (3) Behavioral Analysis:<br /> For group identification, the analysis currently uses a dichotomous approach. Introducing a regression model to capture the degree of identification could offer more granular insights into how varying levels of group identification affect collective behavior and performance.

      (4) Single Brain Activation Analysis:<br /> The application of the General Linear Model (GLM) is unclear, particularly given the long block durations and absence of multiple trials. Further explanation is needed on how the GLM was implemented under these conditions.

      (5) Within-group neural Synchrony (GNS) Calculation:<br /> The method for calculating GNS could be improved by using mutual information instead of pairwise summation, as suggested by Xie et al. (2020) in their study on fMRI triadic hyperscanning. Additionally, the explanation of GNS calculation is inconsistent. At one point, it is mentioned that GNS was averaged across time and channels, while elsewhere, it is stated that channels with the highest GNS were selected. Clarification on this point is essential.

      (6) Placement of fNIRS Probes:<br /> The probes were only placed in the frontal regions, despite literature suggesting that the superior temporal sulcus (STS) and temporoparietal junction (TPJ) regions are crucial for triadic team performance. A justification for this choice or inclusion of these regions in future studies would be beneficial.

      (7) Interpretation of fNIRS Data:<br /> Given that fNIRS signals are slow, similar to BOLD signals in fMRI, the interpretation of Figure 6 raises concerns. It suggests that it takes several minutes (on the order of 4-5 minutes) for people to collaborate, which seems implausible. More context or re-evaluation of this interpretation is needed.

    3. Reviewer #2 (Public review):

      Summary:

      This study primarily aims to examine the relationship between collective performance and group identification. Additionally, the authors propose that inter-brain synchronization (IBS) underlies collective performance and that changes in intra-brain functional connectivity or single-brain activation may, in turn, underlie IBS. The topic addressed in this paper is of great importance in the field using hyperscanning. However, the details of the experiments and analysis described in the paper are unclear, and the hypothesis as to why IBS is thought to underlie collective performance is not clearly presented. In addition, some of the analysis seems to be inappropriate.

      Strengths:

      I find the model presented in Figure 7 to be intriguing. Understanding why inter-brain synchronization occurs and how it is supported by specific single-brain activations or intra-brain functional connectivity is indeed a critical area for researchers conducting hyperscanning studies to explore.

      Understanding triadic-interaction is really important, while almost all hyperscanning neuroimaging focuses on the dyadic interaction. The exploring neural/behavioral/psychological basis behind triadic interaction is a promising method for understanding collective behavior and decision-making.

      Weaknesses:

      The authors need to clearly articulate their hypothesis regarding why neural synchronization occurs during social interaction. For example, in line 284, it is stated that "It is plausible that neural synchronization is closely associated with group identification and collective performance...", but this is far from self-evident. Neural synchronization can occur even when people are merely watching a movie (Hasson et al., 2004), and movie-watchers are not engaged in collective behavior. There is no direct link between the IBS and collective behavior. The authors should explain why they believe inter-brain synchronization occurs in interactive settings and why they think it is related to collective behavior/performance.

      The authors state that "GNS in the OFC was a reliable neuromarker, indicating the influence of group identification on collective performance," but this claim is too strong. Please refer to Figure 4B. Do the authors really believe that collective performance can be predicted given the correlation with the large variance shown? There is a significant discrepancy between observing a correlation between two variables and asserting that one variable is a predictive biomarker for the other.

      Why are the individual answers being analyzed as collective performance (See, L-184)? Although these are performances that emerge after the group discussion, they seem to be individual performances rather than collective ones. Typically, wouldn't the result of a consensus be considered a collective performance? The authors should clarify why the individual's answer is being treated as the measure of collective performance.

      Performing SPM-based mapping followed by conducting a t-test on the channels within statistically significant regions constitutes double dipping, which is not an acceptable method (Kriegeskorte et al., 2011). This issue is evident in, for example, Figures 3A and 4A.

      Please refer to the following source:<br /> https://www.nature.com/articles/nn.2303

      In several key analyses within this study (e.g., single-brain activation in the paragraph starting from L398, neural synchronization in the paragraph starting from L393), the TPJ is mentioned alongside the DLPFC. However, in subsequent detailed analyses, the TPJ is entirely ignored.

      The method for analyzing single-brain activation is unclear. Although it is mentioned that GLM (generalized linear model) was used, it is not specified what regressors were prepared, nor which regressor's β-values are reported as brain activity. Without this information, it is difficult to assess the validity of the reported results.

      While the model illustrated in Figure 7 seems to be interesting, for me, it seems not to be based on the results of this study. This is because the study did not investigate the causal relationships among the three metrics. I guess, Figure 5D might be intended to explain this, but the details of the analysis are not provided, making it unclear what is being presented.

      The details of the experiment are not described at all. While I can somewhat grasp what was done abstractly, the lack of specific information makes it impossible to replicate the study.

    4. Author response:

      We are appreciative of the editors’ and reviewers’ positive comments and constructive suggestions, which will help us to improve our manuscript. We will make changes as required by the reviewers. Our primary focus will be on revising and clarifying certain aspects:

      First, recent research has revealed a strong correlation between brain synchronization and group decision-making, a key neural marker. We aim to bolster our hypothesis by reviewing additional literature, ensuring accuracy in terminology and appropriateness in phrasing.

      Second, it is crucial to note that we will include additional methodological details, such as the details of the experiment, the significance of individual difference variables, and the details of the data analyses.

      Third, despite introducing a novel perspective in our study, we acknowledge the utilization of the conventional fNIRS hyperscanning analyses, which are widely accepted within the research community. Our methodology entails the identification of significant channels via one-sample t-tests, subsequently complemented by either ANOVAs or independent sample t-tests, without the need for double dipping.

      We will address all the issues raised by the reviewers.We believe that the manuscript will significantly benefit from the insightful suggestions and invaluable contributions made by the editors and reviewers.

    1. eLife Assessment

      This important study challenges conventional life-history theory by demonstrating that reproductive-survival trade-offs are minimal in birds, except when reproductive effort is experimentally exaggerated. The evidence is solid, drawing from a meta-analysis of over 30 bird species, and effectively separates the effects of individual quality from reproductive costs. The findings will be of broad interest to evolutionary biologists and ecologists studying life-history trade-offs and reproductive strategies.

    2. Reviewer #4 (Public review):

      Summary:

      This is an important study that underscores that reproduction-survival trade-offs are not manifested (contrary to what generally accepted theory predicts) across a range of studies on birds. This has been studied by a meta-analytical approach, gathering data from a set of 46 papers (30 bird species). The overall conclusion is that there are no trade-offs apparent unless experimental manipulations push the natural variability to extreme values. In the wild, the general pattern for within-species variation is that birds with (naturally) larger clutches survive better.

      Strengths:

      I agree this study highlights important issues and provides good evidence of what it claims, using appropriate methods.

      Weaknesses:

      I also think, however, that it would benefit from broadening its horizon beyond bird studies. The conclusions can be reinforced through insights from other taxa. General reasoning is that there is positive pleiotropy (i.e. individuals vary in quality and therefore some are more fit (perform better) than others. Of course, this is within their current environment (biotic, abiotic, social. ...), with consequences of maintaining genetic variation across generations - outlined in Maklakov et al. 2015 (https://doi.org/10.1002/bies.201500025). This explains the outcomes of this study very well and would come to less controversy and surprise for a more general audience.

      I have two fish examples in my mind where this trade-off is also discounted. Of course, given that it is beyond brood-caring birds, the wording in those studies is slightly different, but the evolutionary insight is the same. First, within species but across populations, Reznick et al. (2004, DOI: 10.1038/nature02936) demonstrated a positive correlation between reproduction and parental survival in guppies. Second, an annual killifish study (2021, DOI: 10.1111/1365-2656.13382) showed, within a population, a positive association between reproduction and (reproductive) aging.

      In fruit flies, there is also a strong experimental study demonstrating the absence of reproduction-lifespan trade-offs (DOI: 10.1016/j.cub.2013.09.049).

      I suggest that incorporating insights from those studies would broaden the scope and reach of the current manuscript.

      Likely impact:

      I think this is an important contribution to a slow shift in how we perceive the importance of trade-offs in ecology and evolution in general. While the current view still is that one individual excelling in one measure of its life history (i.e. receiving benefits) must struggle (i.e. pay costs) in another part. However, a positive correlation between all aspects of life history traits is possible within an individual (such as due to developmental conditions or fitting to a particular environment). Simply, some individuals can perform generally better (be of good quality than others).

    3. Author response:

      The following is the authors’ response to the previous reviews.

      In the second round of reviews, Reviewer 2 made three specific comments. The first comment criticises us for not including a set of equations they had requested in their first review. We did, in fact, include the requested equations in our revised submission, which were in the Supplementary Information, and were also cited in the main text of our revised manuscript and our changes were made clear in our response to the reviewer. The second comment, the reviewer suggested adding one word to a sentence in the abstract. We have made this change (line 23). The third comment, the reviewer highlights a sentence where we agree we could have been more clear. The sentence can be rectified by adding one word to the current sentence, which we have done (line 232). We believe the changes required to our manuscript are very minor, and we have implemented these two suggested changes, which are highlighted in the revised manuscript.

    1. The brain abhors avacuum. Under the best of observation conditions, the absolute best, we only detect, encodeand store in our brains bits and pieces of the entire experience in front of us, and they'restored in different parts of the brain.

      The memory can sometimes be unreliable.

    1. Author response:

      The following is the authors’ response to the original reviews.

      Reviewer #1:

      Summary:

      In this study, Nishi et al. claim that the ratio of long-term hematopoietic stem cell (LT-HSC) versus short-term HSC (ST-HSC) determines the lineage output of HSCs and reduced ratio of ST-HSC in aged mice causes myeloid-biased hematopoiesis. The authors used Hoxb5 reporter mice to isolate LT-HSC and ST-HSC and performed molecular analyses and transplantation assays to support their arguments. How the hematopoietic system becomes myeloid-biased upon aging is an important question with many implications in the disease context as well. However, their study is descriptive with remaining questions.

      Weaknesses:

      Comment #1-1: The authors may need conceptual re-framing of their main argument because whether the ST-HSCs used in this study are functionally indeed short-term "HSCs" is questionable. The data presented in this study and their immunophenotypic definition of ST-HSCs (Lineage negative/Sca-1+/c-Kit+/Flk2-/CD34-/CD150+/Hoxb5-) suggest that authors may find hematopoietic stem cell-like lymphoid progenitors as previously shown for megakaryocyte lineage (Haas et al., Cell stem cell. 2015) or, as the authors briefly mentioned in the discussion, Hoxb5- HSCs could be lymphoid-biased HSCs.

      The authors disputed the idea that Hoxb5- HSCs as lymphoid-biased HSCs based on their previous 4 weeks post-transplantation data (Chen et al., 2016). However, they overlooked the possibility of myeloid reprogramming of lymphoid-biased population during regenerative conditions (Pietras et al., Cell stem cell., 2015). In other words, early post-transplant STHSCs (Hoxb5- HSCs) can be seen as lacking the phenotypic lymphoid-biased HSCs.

      Thinking of their ST-HSCs as hematopoietic stem cell-like lymphoid progenitors or lymphoidbiased HSCs makes more sense conceptually as well.

      Response #1-1: We appreciate this important suggestion and recognize the significance of the debate on whether Hoxb5- HSCs are ST-HSCs or lymphoid-biased HSCs.

      HSCs are defined by their ability to retain hematopoietic potential after a secondary transplantation1-2. If Hoxb5- HSCs were indeed lymphoid-biased HSCs, they would exhibit predominantly lymphoid hematopoiesis even after secondary transplantation. However, functional experiments demonstrate that these cells lose their hematopoietic output after secondary transplantation3 (see Fig. 2 in this paper). Based on the established definition of HSCs in this filed, it is appropriate to classify Hoxb5- HSCs as ST-HSCs rather than lymphoid-biased HSCs.

      Additionally, it has been reported that myeloid reprogramming may occur in the early posttransplant period, around 2-4 weeks after transplantation, even in lymphoid-biased populations within the MPP fraction, due to high inflammatory conditions4. However, when considering the post-transplant hematopoiesis of Hoxb5- HSC fractions as ST-HSCs, they exhibit almost the same myeloid hematopoietic potential as LT-HSCs not only during the early 4 weeks after transplantation but also at 8 weeks post-transplantation3, when the acute inflammatory response has largely subsided. Therefore, it is difficult to attribute the myeloid production by ST-HSCs post-transplant solely to myeloid reprogramming.

      References

      (1) Morrison, S. J. & Weissman, I. L. The long-term repopulating subset of hematopoietic stem cells is deterministic and isolatable by phenotype. Immunity 1, 661–673 (1994).

      (2) Challen, G. A., Boles, N., Lin, K. K. Y. & Goodell, M. A. Mouse hematopoietic stem cell identification and analysis. Cytom. Part A 75, 14–24 (2009).

      (3) Chen, J. Y. et al. Hoxb5 marks long-term haematopoietic stem cells and reveals a homogenous perivascular niche. Nature 530, 223–227 (2016).

      (4) Pietras, E. M. et al. Functionally Distinct Subsets of Lineage-Biased Multipotent Progenitors Control Blood Production in Normal and Regenerative Conditions. Cell Stem Cell 17, 35–46 (2015).

      Comment #1-2: ST-HSCs come from LT-HSCs and further differentiate into lineage-biased multipotent progenitor (MPP) populations including myeloid-biased MPP2 and MPP3. Based on the authors' claim, LT-HSCs (Hoxb5- HSCs) have no lineage bias even in aged mice. Then these LT-HSCs make ST-HSCs, which produce mostly memory T cells. These memory T cell-producing ST-HSCs then produce MPPs including myeloid-biased MPP2 and MPP3.

      This differentiation trajectory is hard to accept. If we think Hoxb5- HSCs (ST-HSCs by authors) as a sub-population of immunophenotypic HSCs with lymphoid lineage bias or hematopoietic stem cell-like lymphoid progenitors, the differentiation trajectory has no flaw.

      Response #1-2: Thank you for this comment, and we apologize for the misunderstanding regarding the predominance of memory T cells in ST-HSCs after transplantation. 

      Our data show that ST-HSCs are not biased HSCs that predominantly produce memory T cells, but rather, ST-HSCs are multipotent hematopoietic cells. ST-HSCs lose their ability to self-renew within a short period, resulting in the cessation of ST-HSC-derived hematopoiesis. As a result, myeloid lineage with a short half-life disappears from the peripheral blood, and memory lymphocytes with a long half-life remain (see Figure 5 in this paper). 

      Comment #1-3: Authors' experimental designs have some caveats to support their claims. Authors claimed that aged LT-HSCs have no myeloid-biased clone expansion using transplantation assays. In these experiments, authors used 10 HSCs and young mice as recipients. Given the huge expansion of old HSC by number and known heterogeneity in immunophenotypically defined HSC populations, it is questionable how 10 out of so many old HSCs can faithfully represent the old HSC population. The Hoxb5+ old HSC primary and secondary recipient mice data (Figure 2C and D) support this concern. In addition, they only used young recipients. Considering the importance of the inflammatory aged niche in the myeloid-biased lineage output, transplanting young vs old LT-HSCs into aged mice will complete the whole picture.

      Response #1-3: We appreciate the reviewer for the comments. We acknowledge that using ten HSCs may not capture the heterogeneity of aging HSCs.

      However, although most of our experiments have used a small number of transplanted cells (e.g., 10 cells), we have conducted functional experiments across Figures 2, 3, 5, 6, S3, and S6, totaling n = 126, equivalent to over 1260 cells. Previous studies have reported that myeloid-biased HSCs constitute more than 50% of the aged HSC population1-2. If myeloidbiased HSCs increase with age, they should be detectable in our experiments. Our functional experiments have consistently shown that Hoxb5+ HSCs exhibit unchanged lineage output throughout life. In contrast, the data presented in this paper indicate that changes in the ratio of LT-HSCs and ST-HSCs may contribute to myeloid-biased hematopoiesis.

      We believe that transplanting aged HSCs into aged recipient mice is crucial to analyzing not only the differentiation potential of aged HSCs but also the changes in their engraftment and self-renewal abilities. We aim to clarify further findings through these experiments in the future.

      References

      (1) Dykstra B, Olthof S, Schreuder J, Ritsema M, Haan G De. Clonal analysis reveals multiple functional defects of aged murine hematopoietic stem cells. J Exp Med. 2011 Dec 19;208(13):2691–703. 

      (2) Yamamoto R, Wilkinson AC, Ooehara J, Lan X, Lai CY, Nakauchi Y, et al. LargeScale Clonal Analysis Resolves Aging of the Mouse Hematopoietic Stem Cell Compartment. Cell Stem Cell [Internet]. 2018;22(4):600-607.e4. Available from: https://doi.org/10.1016/j.stem.2018.03.013

      Comment #1-4: The authors' molecular data analyses need more rigor with unbiased approaches. They claimed that neither aged LT-HSCs nor aged ST-HSCs exhibited myeloid or lymphoid gene set enrichment but aged bulk HSCs, which are just a sum of LT-HSCs and ST-HSCs by their gating scheme (Figure 4A), showed the "tendency" of enrichment of myeloid-related genes based on the selected gene set (Figure 4D). Although the proportion of ST-HSCs is reduced in bulk HSCs upon aging, since ST-HSCs do not exhibit lymphoid gene set enrichment based on their data, it is hard to understand how aged bulk HSCs have more myeloid gene set enrichment compared to young bulk HSCs. This bulk HSC data rather suggests that there could be a trend toward certain lineage bias (although not significant) in aged LT-HSCs or ST-HSCs. The authors need to verify the molecular lineage priming of LT-HSCs and ST-HSCs using another comprehensive dataset.

      Response #1-4: Thank you for pointing out that neither aged LT-HSCs nor aged ST-HSCs exhibited myeloid

      or lymphoid gene set enrichment, although aged bulk HSCs showed a tendency towards enrichment of myeloid-related genes.

      The actual GSEA result had an FDR > 0.05. Therefore, we cannot claim that bulk HSCs showed significant enrichment of myeloid-related genes with age. Consequently, we have revised the following sentences:

      [P11, L251] Neither aged LT-HSCs nor aged ST-HSCs exhibited myeloid/lymphoid gene set enrichment, while shared myeloid-related genes tended to be enriched in aged bulk-HSCs, although this enrichment was not statistically significant (Fig. 4, F and G).

      In addition to the above, we also found that the GSEA results differ among myeloid gene sets (Fig. 4, D-F; Fig. 4S, C-D). These findings suggest that discussing lineage bias in HSCs using GSEA is challenging. We believe that functional experimental data is crucial. From our functional experiments, when the ratio of LT-HSC to ST-HSC was reconstituted to match the ratio in young Bulk-HSCs (LT= 2:8) or aged bulk-HSCs (LT= 5:5), myeloid-biased hematopoiesis was observed with the aged bulk-HSC ratio. Based on this data, the authors concluded that age-related changes in the ratio between LT-HSCs and ST-HSCs in bulkHSCs cause myeloid-biased hematopoiesis rather than an increase in myeloid gene expression in the aged bulk-HSCs.

      Comment #1-5: Some data are too weak to fully support their claims. The authors claimed that age-associated extramedullary changes are the main driver of myeloid-biased hematopoiesis based on no major differences in progenitor populations upon transplantation of 10 young HSCs into young or old recipient mice (Figure 7F) and relatively low donor-derived cells in thymus and spleen in aged recipient mice (Figure 7G-J). However, they used selected mice to calculate the progenitor populations in recipient mice (8 out of 17 from young recipients denoted by * and 8 out of 10 from aged recipients denoted by * in Figure 7C). In addition, they calculated the progenitor populations as frequency in c-kit positive cells. Given that they transplanted 10 LT-HSCs into "sub-lethally" irradiated mice and 8.7 Gy irradiation can have different effects on bone marrow clearance in young vs old mice, it is not clear whether this data is reliable enough to support their claims. The same concern applies to the data Figure 7G-J. Authors need to provide alternative data to support their claims.

      Response #1-5: Thank you for useful comments. Our claim regarding Fig. 7 is that age-associated extramedullary changes are merely additional drivers for myeloid-biased hematopoiesis are not the main drivers. But we will address the issues pointed out.

      Regarding the reason for analyzing the asterisk mice

      We performed two independent experiments for Fig. 7. In the first experiment, we planned to analyze the BM of recipients 16 weeks after transplantation. However, as shown in Fig. 7B, many of the aged mice died before 16 weeks. Therefore, we decided to examine the BM of the recipient mice at 12 weeks in the second experiment. Below are the peripheral blood results 11-12 weeks after transplantation for the mice used in the second experiment.

      Author response image 1.

      For the second experiment, we analyzed the BM of all eight all eight aged recipients. Then, we selected the same number of young recipients for analysis to ensure that the donor myeloid output would be comparable to that of the entire young group. Indeed, the donor myeloid lineage output of the selected mice was 28.1 ± 22.9%, closely matching the 23.5 ± 23.3% (p = 0.68) observed in the entire young recipient population. 

      That being said, as the reviewer pointed out, it is considerable that the BM, thymus, and spleen of all mice were not analyzed. Hence, we have added the following sentences:

      [P14, L327] We performed BM analysis for the mice denoted by † in Figure 7C because many of the aged mice had died before the analysis.

      [P15, L338] The thymus and spleen analyses were also performed on the mice denoted by † in Figure 7C.

      Regarding the reason for 8.7 Gy.

      Thank you for your question about whether 8.7 Gy is myeloablative. In our previous report1, we demonstrated that none of the mice subjected to pre-treatment with 8.7 Gy could survive when non-LKS cells were transplanted, suggesting that 8.7 Gy is enough to be myeloablative with the radiation equipment at our facility.

      Author response image 2.

      Response #1-5:

      Reference

      (1)  Nishi K, Sakamaki T, Sadaoka K, Fujii M, Takaori-Kondo A, Chen JY, et al. Identification of the minimum requirements for successful haematopoietic stem cell transplantation. Br J Haematol. 2022;196(3):711–23. 

      Regarding the normalization of c-Kit in Figure 7F.  

      Firstly, as shown in Supplemental Figures S1B and S1C, we analyze the upstream (HSC, MPP, Flk2+) and downstream (CLP, MEP, CMP, GMP) fractions in different panels. Therefore, normalization is required to assess the differentiation of HSCs from upstream to downstream. Additionally, the reason for normalizing by c-Kit+ is that the bone marrow analysis was performed after enrichment using the Anti-c-Kit antibody for both upstream and downstream fractions. Based on this, we calculated the progenitor populations as a frequency within the c-Kit positive cells.

      Next, the results of normalizing the whole bone marrow cells (live cells) are shown below. 

      Author response image 3.

      Similar to the results of normalizing c-Kit+ cells, myeloid progenitors remained unchanged, including a statistically significant decrease in CMP in aged mice. Additionally, there were no significant differences in CLP. In conclusion, we obtained similar results between the normalization with c-Kit and the normalization with whole bone marrow cells (live cells).

      However, as the reviewer pointed out, it is necessary to explain the reason for normalization with c-Kit. Therefore, we will add the following description.

      [P21, L502] For the combined analysis of the upstream (HSC, MPP, Flk2+) and downstream (CLP, MEP, CMP, GMP) fractions in Figures 1B and 7F, we normalized by c-Kit+ cells because we performed a c-Kit enrichment for the bone marrow analysis.

      Reviewer #2:

      Summary:  

      Nishi et al, investigate the well-known and previously described phenomenon of ageassociated myeloid-biased hematopoiesis. Using a previously established HoxB5mCherry mouse model, they used HoxB5+ and HoxB5- HSCs to discriminate cells with long-term (LTHSCs) and short-term (ST-HSCs) reconstitution potential and compared these populations to immunophenotypically defined 'bulk HSCs' that consists of a mixture of LT-HSC and STHSCs. They then isolated these HSC populations from young and aged mice to test their function and myeloid bias in non-competitive and competitive transplants into young and aged recipients. Based on quantification of hematopoietic cell frequencies in the bone marrow, peripheral blood, and in some experiments the spleen and thymus, the authors argue against the currently held belief that myeloid-biased HSCs expand with age. 

      Comment #2-1: While aspects of their work are fascinating and might have merit, several issues weaken the overall strength of the arguments and interpretation. Multiple experiments were done with a very low number of recipient mice, showed very large standard deviations, and had no statistically detectable difference between experimental groups. While the authors conclude that these experimental groups are not different, the displayed results seem too variable to conclude anything with certainty. The sensitivity of the performed experiments (e.g. Figure 3; Figure 6C, D) is too low to detect even reasonably strong differences between experimental groups and is thus inadequate to support the author's claims. This weakness of the study is not acknowledged in the text and is also not discussed. To support their conclusions the authors need to provide higher n-numbers and provide a detailed power analysis of the transplants in the methods section.

      Response #2-1: Thank you for your important remarks. The power analysis for this experiment shows that power = 0.319, suggesting that more number may be needed. On the other hand, our method for determining the sample size in Figure 3 is as follows:

      (1) First, we checked whether myeloid biased change is detected in the bulk-HSC fraction (Figure S3). The results showed that the difference in myeloid output at 16 weeks after transplantation was statistically significant (young vs. aged = 7.2 ± 8.9 vs. 42.1 ± 35.5%, p = 0.01), even though n = 10.

      (2) Next, myeloid biased HSCs have been reported to be a fraction with high self-renewal ability (2004, Blood). If myeloid biased HSCs increase with aging, the increase in myeloid biased HSCs in LT-HSC fraction would be detected with higher sensitivity than in the bulk-HSC fraction used in Figure S3.

      (3) However, there was no difference not only in p-values but also in the mean itself, young vs aged = 51.4±31.5% vs 47.4±39.0%, p = 0.82, even though n = 8 in Figure 3. Since there was no difference in the mean itself, it is highly likely that no difference will be detected even if n is further increased.

      Regarding Figure 6, we obtained a statistically significant difference and consider the sample size to be sufficient. 

      In addition, we have performed various functional experiments (Figures 2, 5, 6 and S6), and have obtained consistent results that expansion of myeloid biased HSCs does not occur with aging in Hoxb5+HSCs fraction. Based on the above, we conclude that the LT-HSC fraction does not differ in myeloid differentiation potential with aging.

      Comment #2-2: As the authors attempt to challenge the current model of the age-associated expansion of myeloid-biased HSCs (which has been observed and reproduced by many different groups), ideally additional strong evidence in the form of single-cell transplants is provided.

      Response #2-2: Thank you for the comments. As the reviewer pointed out, we hope we could reconfirm our results using single-cell level technology in the future.

      On the other hand, we have reported that the ratio of myeloid to lymphoid cells in the peripheral blood changes when the number of HSCs transplanted, or the number of supporting cells transplanted with HSCs, is varied1-2. Therefore, single-cell transplant data need to be interpreted very carefully to determine differentiation potential.

      From this viewpoint, future experiments will combine the Hoxb5 reporter system with a lineage tracing system that can track HSCs at the single-cell level over time. This approach will investigate changes in the self-renewal capacity of individual HSCs and their subsequent differentiation into progenitor cells and peripheral blood cells. We have reflected this comment by adding the following sentences in the manuscript.

      [P19, L451] In contrast, our findings should be considered in light of some limitations. In this report, we primarily performed ten to twenty cell transplantation assays. Therefore, the current theory should be revalidated using single-cell technology with lineage tracing system3-4. This approach will investigate changes in the self-renewal capacity of individual HSCs and their subsequent differentiation into progenitor cells and peripheral blood cells. 

      References

      (1) Nishi K, Sakamaki T, Sadaoka K, Fujii M, Takaori-Kondo A, Chen JY, et al. Identification of the minimum requirements for successful haematopoietic stem cell transplantation. Br J Haematol. 2022;196(3):711–23. 

      (2) Sakamaki T, Kao KS, Nishi K, Chen JY, Sadaoka K, Fujii M, et al. Hoxb5 defines the heterogeneity of self-renewal capacity in the hematopoietic stem cell compartment. Biochem Biophys Res Commun [Internet]. 2021;539:34–41. Available from: https://doi.org/10.1016/j.bbrc.2020.12.077

      (3) Yamamoto R, Wilkinson AC, Ooehara J, Lan X, Lai CY, Nakauchi Y, et al. LargeScale Clonal Analysis Resolves Aging of the Mouse Hematopoietic Stem Cell Compartment. Cell Stem Cell [Internet]. 2018;22(4):600-607.e4. Available from: https://doi.org/10.1016/j.stem.2018.03.013

      (4) Rodriguez-Fraticelli AE, Weinreb C, Wang SW, Migueles RP, Jankovic M, Usart M, et al. Single-cell lineage tracing unveils a role for TCF15 in haematopoiesis. Nature [Internet].

      2020;583(7817):585–9. Available from: http://dx.doi.org/10.1038/s41586-020-2503-6

      Comment #2-3: It is also unclear why the authors believe that the observed reduction of ST-HSCs relative to LT-HSCs explains the myeloid-biased phenotype observed in the peripheral blood. This point seems counterintuitive and requires further explanation.

      Response #2-3: Thank you for your comment. We apologize for the insufficient explanation. Our data, as shown in Figures 3 and 4, demonstrate that the differentiation potential of LT-HSCs remains unchanged with age. Therefore, rather than suggesting that an increase in LT-HSCs with a consistent differentiation capacity leads to myeloid-biased hematopoiesis, it seems more accurate to highlight that the relative decrease in the proportion of ST-HSCs, which remain in peripheral blood as lymphocytes, leads to a relative increase in myeloid cells in peripheral blood and thus causes myeloid-biased hematopoiesis.

      However, if we focus on the increase in the ratio of LT-HSCs, it is also plausible to explain that “with aging, the proportion of LT-HSCs capable of long-term myeloid hematopoiesis increases. As a result, from 16 weeks after transplantation, the influence of LT-HSCs maintaining the long-term ability to produce myeloid cells becomes relatively more significant, leading to an increase in the ratio of myeloid cells in the peripheral blood and causing myeloid-biased hematopoiesis.”

      Comment #2-4: Based on my understanding of the presented data, the authors argue that myeloid-biased HSCs do not exist, as<br /> a) they detect no difference between young/aged HSCs after transplant (mind low n-numbers and large std!); b) myeloid progenitors downstream of HSCs only show minor or no changes in frequency and c) aged LT-HSCs do not outperform young LT-HSC in myeloid output LT-HScs in competitive transplants (mind low n-numbers and large std!).

      Response #2-4: We appreciate the comments. As mentioned above, we will correct the manuscript regarding the sample size.

      Regarding the interpreting of the lack of increase in the percentage of myeloid progenitor cells in the bone marrow with age, it is instead possible that various confounding factors, such as differentiation shortcuts or changes in the microenviroment, are involved.

      However, even when aged LT-HSCs and young LT-HSCs are transplanted into the same recipient mice, the timing of the appearance of different cell fractions in peripheral blood is similar (Figure 3 of this paper). Therefore, we have not obtained data suggesting that clear shortcuts exist in the differentiation process of aged HSCs into neutrophils or monocytes. Additionally, it is currently consensually accepted that myeloid cells, including neutrophils and monocytes, differentiate from GMPs1. Since there is no changes in the proportion of GMPs in the bone marrow with age, we concluded that the differentiation potential into myeloid cells remains consistent with aging.

      Reference

      (1) Akashi K and others, ‘A Clonogenic Common Myeloid Progenitor That Gives Rise to All Myeloid Lineages’, Nature, 404.6774 (2000), 193–97.

      Strengths: 

      The authors present an interesting observation and offer an alternative explanation of the origins of aged-associated myeloid-biased hematopoiesis. Their data regarding the role of the microenvironment in the spleen and thymus appears to be convincing. 

      Weaknesses: 

      Comment #2-5: "Then, we found that the myeloid lineage proportions from young and aged LT-HSCs were nearly comparable during the observation period after transplantation (Figure 3, B and C)."<br /> Given the large standard deviation and low n-numbers, the power of the analysis to detect differences between experimental groups is very low. Experimental groups with too large standard deviations (as displayed here) are difficult to interpret and might be inconclusive. The absence of clearly detectable differences between young and aged transplanted HSCs could thus simply be a false-negative result. The shown experimental results hence do not provide strong evidence for the author's interpretation of the data. The authors should add additional transplants and include a detailed power analysis to be able to detect differences between experimental groups with reasonable sensitivity.

      Response #2-5: Thank you for providing these insights. Regarding the sample size, we have addressed this in Response #2-1.

      Comment #2-6: Line 293: "Based on these findings, we concluded that myeloid-biased hematopoiesis observed following transplantation of aged HSCs was caused by a relative decrease in ST-HSC in the bulk-HSC compartment in aged mice rather than the selective expansion of myeloid-biased HSC clones."<br /> Couldn't that also be explained by an increase in myeloid-biased HSCs, as repeatedly reported and seen in the expansion of CD150+ HSCs? It is not intuitively clear why a reduction of ST-HSCs clones would lead to a myeloid bias. The author should try to explain more clearly where they believe the increased number of myeloid cells comes from. What is the source of myeloid cells if the authors believe they are not derived from the expanded population of myeloid-biased HSCs?

      Response #2-6: Thank you for pointing this out. We apologize for the insufficient explanation. We will explain using Figure 8 from the paper.

      First, our data show that LT-HSCs maintain their differentiation capacity with age, while ST-HSCs lose their self-renewal capacity earlier, so that only long-lived memory lymphocytes remain in the peripheral blood after the loss of self-renewal capacity in ST-HSCs (Figure 8, upper panel). In mouse bone marrow, the proportion of LT-HSCs increases with age, while the proportion of STHSCs relatively decreases (Figure 8, lower panel and Figure S5). 

      Our data show that merely reproducing the ratio of LT-HSCs to ST-HSCs observed in aged mice using young LT-HSCs and ST-HSCs can replicate myeloid-biased hematopoiesis. This suggests that the increase in LT-HSC and the relative decrease in ST-HSC within the HSC compartment with aging are likely to contribute to myeloid-biased hematopoiesis.

      As mentioned earlier, since the differentiation capacity of LT-HSCs remain unchaged with age, it seems more accurate to describe that the relative decrease in the proportion of STHSCs, which retain long-lived memory lymphocytes in peripheral blood, leads to a relative increase in myeloid cells in peripheral blood and thus causes myeloid-biased hematopoiesis.

      However, focusing on the increase in the proportion of LT-HSCs, it is also possible to explain that “with aging, the proportion of LT-HSCs capable of long-term myeloid hematopoiesis increases. As a result, from 16 weeks after transplantation, the influence of LT-HSCs maintaining the long-term ability to produce myeloid cells becomes relatively more significant, leading to an increase in the ratio of myeloid cells in the peripheral blood and causing myeloid-biased hematopoiesis.”

      Reviewer #3:

      Summary:

      In this manuscript, Nishi et al. propose a new model to explain the previously reported myeloid-biased hematopoiesis associated with aging. Traditionally, this phenotype has been explained by the expansion of myeloid-biased hematopoietic stem cell (HSC) clones during aging. Here, the authors question this idea and show how their Hoxb5 reporter model can discriminate long-term (LT) and short-term (ST) HSC and characterized their lineage output after transplant. From these analyses, the authors conclude that changes during aging in the LT/ST HSC proportion explain the myeloid bias observed. 

      Although the topic is appropriate and the new model provides a new way to think about lineage-biased output observed in multiple hematopoietic contexts, some of the experimental design choices, as well as some of the conclusions drawn from the results could be substantially improved. Also, they do not propose any potential mechanism to explain this process, which reduces the potential impact and novelty of the study. Specific concerns are outlined below. 

      Major 

      Comment #3-1: As a general comment, there are experimental details that are either missing or not clear. The main one is related to transplantation assays. What is the irradiation dose? The Methods sections indicates "recipient mice were lethally irradiated with single doses of 8.7 or 9.1 Gy". The only experimental schematic indicating the irradiation dose is Figure 7A, which uses 8.7 Gy. Also, although there is not a "standard", 11 Gy split in two doses is typically considered lethal irradiation, while 9.5 Gy is considered sublethal.

      Response #3-1: We agree with reviewer’s assessment about whether 8.7 Gy is myeloablative. To confirm this, it would typically be necessary to irradiate mice with different dose and observe if they do not survive. However, such an experiment is not ethically permissible at our facility. Instead, in our previous report1, we demonstrated that none of the mice subjected to pretreatment with 8.7 Gy could survive when non-LKS cells were transplanted, suggesting that

      8.7 Gy is enough to be myeloablative with the radiation equipment at our facility.

      Reference

      (1) Nishi K, Sakamaki T, Sadaoka K, Fujii M, Takaori-Kondo A, Chen JY, et al. Identification of the minimum requirements for successful haematopoietic stem cell transplantation. Br J Haematol. 2022;196(3):711–23. 

      Comment #3-2:  Is there any reason for these lower doses? Same question for giving a single dose and for performing irradiation a day before transplant. 

      Response #3-2: We appreciate the reviewer for these important comments. Although the 8.7 Gy dose used at our facility is lower than in other reports, we selected this dose to maintain consistency with our previous experiments. For the same reason, we used a single irradiation, not split.  Regarding the timing of irradiation, the method section specifies that irradiation timing is 12-24 hours prior to transplantation. In most experiments, irradiation is performed at 12 hours. However, due to experimental progress, there were occasional instances where nearly 24 hours elapsed between irradiation and transplantation. We provide this information to ensure accuracy.

      Comment #3-3: The manuscript would benefit from the inclusion of references to recent studies discussing hematopoietic biases and differentiation dynamics at a single-cell level (e.g., Yamamoto et. al 2018; Rodriguez-Fraticelli et al., 2020). Also, when discussing the discrepancy between studies claiming different biases within the HSC pool, the authors mentioned that Montecino-Rodriguez et al. 2019 showed preserved lymphoid potential with age. It would be good to acknowledge that this study used busulfan as the conditioning method instead of irradiation.

      Response #3-3: We agree with this comment and have incorporated this suggestion into the manuscript

      [P19, L451] In contrast, our findings should be considered in light of some limitations. In this report, we primarily performed ten to twenty cell transplantation assays. Therefore, the current theory should be revalidated using single-cell technology with lineage tracing system1-2. This approach will investigate changes in the self-renewal capacity of individual HSCs and their subsequent differentiation into progenitor cells and peripheral blood cells. Additionally, in this report we purified LT-HSCs by Hoxb5 reporter system. In contrast, various LT-HSC markers have been previously reported2-3.  Therefore, it is ideal to validate our findings using other LT-HSC makers.

      [P16, L368] Other studies suggest that blockage of lymphoid hematopoiesis in aged mice results in myeloid-skewed hematopoiesis through alternative mechanisms. However, this result should be interpreted carefully, since Busulfan was used for myeloablative treatment in this study4.   

      References

      (1) Yamamoto R, Wilkinson AC, Ooehara J, Lan X, Lai CY, Nakauchi Y, et al. LargeScale Clonal Analysis Resolves Aging of the Mouse Hematopoietic Stem Cell Compartment. Cell Stem Cell [Internet]. 2018;22(4):600-607.e4. Available from: https://doi.org/10.1016/j.stem.2018.03.013

      (2) Rodriguez-Fraticelli AE, Weinreb C, Wang SW, Migueles RP, Jankovic M, Usart M, et al. Single-cell lineage tracing unveils a role for TCF15 in haematopoiesis. Nature [Internet]. 2020;583(7817):585–9. Available from: http://dx.doi.org/10.1038/s41586-020-2503-6

      (3) Sanjuan-Pla A, Macaulay IC, Jensen CT, Woll PS, Luis TC, Mead A, et al. Plateletbiased stem cells reside at the apex of the haematopoietic stem-cell hierarchy. Nature.

      2013;502(7470):232–6. 

      (4) Montecino-Rodriguez E, Kong Y, Casero D, Rouault A, Dorshkind K, Pioli PD. Lymphoid-Biased Hematopoietic Stem Cells Are Maintained with Age and Efficiently Generate Lymphoid Progeny. Stem Cell Reports. 2019 Mar 5;12(3):584–96. 

      Comment #3-4: When representing the contribution to PB from transplanted cells, the authors show the % of each lineage within the donor-derived cells (Figures 3B-C, 5B, 6B-D, 7C-E, and S3 B-C). To have a better picture of total donor contribution, total PB and BM chimerism should be included for each transplantation assay. Also, for Figures 2C-D and Figures S2A-B, do the graphs represent 100% of the PB cells? Are there any radioresistant cells?

      Response #3-4: Thank you for highlighting this point. Indeed, donor contribution to total peripheral blood (PB) is important information. We have included the donor contribution data for each figure above mentioned.

      Author response image 4.

      In Figure 2C-D and Figure S2A-B, the percentage of donor chimerism in PB was defined as the percentage of CD45.1-CD45.2+ cells among total CD45.1-CD45.2+ and CD45.1+CD45.2+ cells as described in method section.

      Comment #3-5: For BM progenitor frequencies, the authors present the data as the frequency of cKit+ cells. This normalization might be misleading as changes in the proportion of cKit+ between the different experimental conditions could mask differences in these BM subpopulations. Representing this data as the frequency of BM single cells or as absolute numbers (e.g., per femur) would be valuable.

      Response #3-5: We appreciate the reviewer's comment on this point. 

      Firstly, as shown in Supplemental Figures S1B and S1C, we analyze the upstream (HSC, MPP, Flk2+) and downstream (CLP, MEP, CMP, GMP) fractions in different panels. Therefore, normalization is required to assess the differentiation of HSCs from upstream to downstream. Additionally, the reason for normalizing by c-Kit+ is that the bone marrow analysis was performed after enrichment using the Anti-c-Kit antibody for both upstream and downstream fractions. Based on this, we calculated the progenitor populations as a frequency within the c-Kit positive cells. Next, the results of normalizing the whole bone marrow cells (live cells) are shown in Author response image 2. 

      Similar to the results of normalizing c-Kit+ cells, myeloid progenitors remained unchanged, including a statistically significant decrease in CMP in aged mice. Additionally, there were no significant differences in CLP. In conclusion, similar results were obtained between the normalization with c-Kit and the normalization with whole bone marrow cells (live cells).

      However, as the reviewer pointed out, it is necessary to explain the reason for normalization with c-Kit. Therefore, we will add the following description.

      [P21, L502] For the combined analysis of the upstream (HSC, MPP, Flk2+) and downstream (CLP, MEP, CMP, GMP) fractions in Figures 1B and 7F, we normalized by c-Kit+ cells because we performed a c-Kit enrichment for the bone marrow analysis.

      Comment #3-6: Regarding Figure 1B, the authors argue that if myeloid-biased HSC clones increase with age, they should see increased frequency of all components of the myeloid differentiation pathway (CMP, GMP, MEP). This would imply that their results (no changes or reduction in these myeloid subpopulations) suggest the absence of myeloid-biased HSC clones expansion with age. This reviewer believes that differentiation dynamics within the hematopoietic hierarchy can be more complex than a cascade of sequential and compartmentalized events (e.g., accelerated differentiation at the CMP level could cause exhaustion of this compartment and explain its reduction with age and why GMP and MEP are unchanged) and these conclusions should be considered more carefully.

      Response #3-6: We wish to thank the reviewer for this comment. We agree with that the differentiation pathway may not be a cascade of sequential events but could be influenced by various factors such as extrinsic factors.

      In Figure 1B, we hypothesized that there may be other mechanisms causing myeloidbiased hematopoiesis besides the age-related increase in myeloid-biased HSCs, given that the percentage of myeloid progenitor cells in the bone marrow did not change with age. However, we do not discuss the presence or absence of myeloid-biased HSCs based on the data in Figure 1B. 

      Our newly proposed theories—that the differentiation capacity of LT-HSCs remains unchanged with age and that age-related myeloid-biased hematopoiesis is due to changes in the ratio of LT-HSCs to ST-HSCs—are based on functional experiment results. As the reviewer pointed out, to discuss the presence or absence of myeloid-biased HSCs based on the data in Figure 1B, it is necessary to apply a system that can track HSC differentiation at single-cell level. The technology would clarify changes in the self-renewal capacity of individual HSCs and their differentiation into progenitor cells and peripheral blood cells. The authors believe that those single-cell technologies will be beneficial in understanding the differentiation of HSCs. Based on the above, the following statement has been added to the text.

      [P19, L451] In contrast, our findings should be considered in light of some limitations. In this report, we primarily performed ten to twenty cell transplantation assays. Therefore, the current theory should be revalidated using single-cell technology with lineage tracing system1-2. This approach will investigate changes in the self-renewal capacity of individual HSCs and their subsequent differentiation into progenitor cells and peripheral blood cells. 

      References

      (1) Yamamoto R, Wilkinson AC, Ooehara J, Lan X, Lai CY, Nakauchi Y, et al. LargeScale Clonal Analysis Resolves Aging of the Mouse Hematopoietic Stem Cell Compartment. Cell Stem Cell [Internet]. 2018;22(4):600-607.e4. Available from: https://doi.org/10.1016/j.stem.2018.03.013

      (2) Rodriguez-Fraticelli AE, Weinreb C, Wang SW, Migueles RP, Jankovic M, Usart M, et al. Single-cell lineage tracing unveils a role for TCF15 in haematopoiesis. Nature [Internet]. 2020;583(7817):585–9. Available from: http://dx.doi.org/10.1038/s41586-020-2503-6

      Comment #3-7: Within the few recipients showing good donor engraftment in Figure 2C, there is a big proportion of T cells that are "amplified" upon secondary transplantation (Figure 2D). Is this expected?

      Response #3-7: We wish to express our deep appreciation to the reviewer for insightful comment on this point. As the reviewers pointed out, in Figure 2D, a few recipients show a very high percentage of T cells. The authors had the same question and considered this phenomenon as follows:

      (1) One reason for the very high percentage of T cells is that we used 1 x 107 whole bone marrow cells in the secondary transplantation. Consequently, the donor cells in the secondary transplantation contained more T-cell progenitor cells, leading to a greater increase in T cells compared to the primary transplantation.

      (2) We also consider that this phenomenon may be influenced by the reduced selfrenewal capacity of aged LT-HSCs, resulting in decreased sustained production of myeloid cells in the secondary recipient mice. As a result, long-lived memory-type lymphocytes may preferentially remain in the peripheral blood, increasing the percentage of T cells in the secondary recipient mice.

      We have discussed our hypothesis regarding this interesting phenomenon. To further clarify the characteristics of the increased T-cell count in the secondary recipient mice, we will analyze TCR clonality and diversity in the future.

      Comment #3-8: Do the authors have any explanation for the high level of variability within the recipients of Hoxb5+ cells in Figure 2C?

      Response #3-8: We appreciate the reviewer's comment on this point. As noted in our previous report, transplantation of a sufficient number of HSCs results in stable donor chimerism, whereas a small number of HSCs leads to increased variability in donor chimerism1. Additionally, other studies have observed high variability when fewer than 10 HSCs are transplanted2-3. Based on this evidence, we consider that the transplantation of a small number of cells (10 cells) is the primary cause of the high level of variability observed.

      References

      (1) Nishi K, Sakamaki T, Sadaoka K, Fujii M, Takaori-Kondo A, Chen JY, et al. Identification of the minimum requirements for successful haematopoietic stem cell transplantation. Br J Haematol. 2022;196(3):711–23. 

      (2) Dykstra B, Olthof S, Schreuder J, Ritsema M, Haan G De. Clonal analysis reveals multiple functional defects of aged murine hematopoietic stem cells. J Exp Med. 2011 Dec 19;208(13):2691–703. 

      (3) Yamamoto R, Wilkinson AC, Ooehara J, Lan X, Lai CY, Nakauchi Y, et al. LargeScale Clonal Analysis Resolves Aging of the Mouse Hematopoietic Stem Cell Compartment. Cell Stem Cell [Internet]. 2018;22(4):600-607.e4. Available from: https://doi.org/10.1016/j.stem.2018.03.013

      Comment #3-9: Can the results from Figure 2E be interpreted as Hoxb5+ cells having a myeloid bias? (differences are more obvious/significant in neutrophils and monocytes).

      Response #3-9: Thank you for your insightful comments. Firstly, we have not obtained any data indicating that young LT-HSCs are myeloid biased HSCs so far. Therefore, we classify young LT-HSCs as balanced HSCs1. Secondly, our current data demonstrate no significant difference in differentiation capacity between young and aged LT-HSCs (see Figure 3 in this paper). Based on these findings, we interpret that aged LT-HSCs are balanced HSCs, similar to young LT-HSCs.

      Reference

      (1)  Chen JY, Miyanishi M, Wang SK, Yamazaki S, Sinha R, Kao KS, et al. Hoxb5 marks long-term haematopoietic stem cells and reveals a homogenous perivascular niche. Nature. 2016 Feb 10;530(7589):223–7. 

      Comment #3-10: Is Figure 2G considering all primary recipients or only the ones that were used for secondary transplants? The second option would be a fairer comparison.

      Response #3-10: We appreciate the reviewer's comment on this point. We considered all primary recipients in Figure 2G to ensure a fair comparison, given the influence of various factors such as the radiosensitivity of individual recipient mice1. Comparing only the primary recipients used in the secondary transplantation would result in n = 3 (primary recipient) vs. n = 12 (secondary recipient). Including all primary recipients yields n = 11 vs. n = 12, providing a more balanced comparison. Therefore, we analyzed all primary recipient mice to ensure the reliability of our results.

      Reference

      (1) Duran-Struuck R, Dysko RC. Principles of bone marrow transplantation (BMT): providing optimal veterinary and husbandry care to irradiated mice in BMT studies. J Am Assoc Lab Anim Sci. 2009; 48:11–22

      Comment #3-11: When discussing the transcriptional profile of young and aged HSCs, the authors claim that genes linked to myeloid differentiation remain unchanged in the LT-HSC fraction while there are significant changes in the ST-HSCs. However, 2 out of the 4 genes shown in Figure S4B show ratios higher than 1 in LT-HSCs.

      Response #3-11: Thank you for highlighting this important point. As the reviewer pointed out, when we analyze the expression of myeloid-related genes, some genes are elevated in aged LT-HSCs compared to young LT-HSCs. However, the GSEA analysis using myeloid-related gene sets, which include several hundred genes, shows no significant difference between young and aged LT-HSCs (see Figure S4C in this paper). Furthermore, functional experiments using the co-transplantation system show no difference in differentiation capacity between young and aged LT-HSCs (see Figure 3 in this paper). Based on these results, we conclude that LT-HSCs do not exhibit any change in differentiation capacity with aging.

      Comment #3-12: When determining the lymphoid bias in ST-HSCs, the authors focus on the T-cell subtype, not considering any other any other lymphoid population. Could the authors explain this?

      Response #3-12: We thank the reviewer for this comment. We conducted the experiments in Figure 5 to demonstrate that the hematopoiesis observed 16 weeks post-transplantation—when STHSCs are believed to lose their self-renewal capacity—is not due to de novo production of T cells from ST-HSCs. Instead, it is attributed to long-lived memory cells which can persistently remain in the peripheral blood.

      As noted by the reviewer, various memory cell types are present in peripheral blood. Our analysis focused on memory T cells due to the broad consensus on memory T cell markers1. 

      Our findings show that transplanted Hoxb5- HSCs do not continuously produce lymphoid cells, unlike lymphoid-biased HSCs. Rather, the loss of self-renewal capacity in Hoxb5- HSCs makes the presence of long-lived memory cells in the peripheral blood more apparent.

      Reference

      (1)  Yenyuwadee S, Sanchez-Trincado Lopez JL, Shah R, Rosato PC, Boussiotis VA. The evolving role of tissue-resident memory T cells in infections and cancer. Sci Adv. 2022;8(33). 

      Comment #3-13: Based on the reduced frequency of donor cells in the spleen and thymus, the authors conclude "the process of lymphoid lineage differentiation was impaired in the spleens and thymi of aged mice compared to young mice". An alternative explanation could be that differentiated cells do not successfully migrate from the bone marrow to these secondary lymphoid organs. Please consider this possibility when discussing the data.

      Response #3-13: We strongly appreciate the reviewer's comment on this point. In accordance with the reviewer's comment, we have incorporated this suggestion into our manuscript.

      [P15, L343] These results indicate that the process of lymphoid lineage differentiation is impaired in the spleens and thymi of aged mice compared to young mice, or that differentiating cells in the bone marrow do not successfully migrate into these secondary lymphoid organs. These factors contribute to the enhanced myeloid-biased hematopoiesis in peripheral blood due to a decrease in de novo lymphocyte production.

      Recommendations for the authors:

      Reviewer #2 (Recommendations For The Authors):

      Recommendation #2-1: To support their conclusions the authors need to provide higher n-numbers and provide a detailed power analysis of the transplants in the methods section.

      Response to Recommendation #2-1: Thank you for your important remarks. The power analysis for this experiment shows that power = 0.319, suggesting that more number may be needed. On the other hand, our method for determining the sample size in Figure 3 is as follows:

      (1) First, we checked whether myeloid biased change is detected in the bulk-HSC fraction (Figure S3). The results showed that the difference in myeloid output at 16 weeks after transplantation was statistically significant (young vs. aged = 7.2 ± 8.9 vs. 42.1 ± 35.5%, p = 0.01), even though n = 10.

      (2) Next, myeloid biased HSCs have been reported to be a fraction with high self-renewal ability (2004, Blood). If myeloid biased HSCs increase with aging, the increase in myeloid biased HSCs in LT-HSC fraction would be detected with higher sensitivity than in the bulk-HSC fraction used in Figure S3.

      (3) However, there was no difference not only in p-values but also in the mean itself, young vs aged = 51.4±31.5% vs 47.4±39.0%, p = 0.82, even though n = 8 in Figure 3. Since there was no difference in the mean itself, it is highly likely that no difference will be detected even if n is further increased.

      Regarding Figure S3, 5, 6, S6 and 7, we obtained a statistically significant difference and consider the sample size to be sufficient. 

      Recommendation #2-2: As the authors attempt to challenge the current model of the age-associated expansion of myeloid-biased HSCs (which has been observed and reproduced by many different groups), ideally additional strong evidence in the form of single-cell transplants is provided.

      Response to Recommendation #2-2: Thank you for the comments. As the reviewer pointed out, we hope we could reconfirm our results using single-cell level technology in the future.

      On the other hand, we have reported that the ratio of myeloid to lymphoid cells in the peripheral blood changes when the number of HSCs transplanted, or the number of supporting cells transplanted with HSCs, is varied1-2. Therefore, single-cell transplant data need to be interpreted very carefully to determine differentiation potential.

      From this viewpoint, future experiments will combine the Hoxb5 reporter system with a lineage tracing system that can track HSCs at the single-cell level over time. This approach will investigate changes in the self-renewal capacity of individual HSCs and their subsequent differentiation into progenitor cells and peripheral blood cells. We have reflected this comment by adding the following sentences in the manuscript.

      [P19, L451] In contrast, our findings should be considered in light of some limitations. In this report, we primarily performed ten to twenty transplantation assays. Therefore, the current theory should be revalidated using single-cell technology. This approach will investigate changes in the self-renewal capacity of individual HSCs and their subsequent differentiation into progenitor cells and peripheral blood cells.

      References

      (1) Nishi K, Sakamaki T, Sadaoka K, Fujii M, Takaori-Kondo A, Chen JY, et al. Identification of the minimum requirements for successful haematopoietic stem cell transplantation. Br J Haematol. 2022;196(3):711–23. 

      (2) Sakamaki T, Kao KS, Nishi K, Chen JY, Sadaoka K, Fujii M, et al. Hoxb5 defines the heterogeneity of self-renewal capacity in the hematopoietic stem cell compartment. Biochem Biophys Res Commun [Internet]. 2021;539:34–41. Available from: https://doi.org/10.1016/j.bbrc.2020.12.077

      Minor points:

      Recommendation #2-3: Figure 1: "Comprehensive analysis of hematopoietic alternations with age shows a discrepancy of age-associated changes between peripheral blood and bone marrow"

      [Comment to the authors]: For clarity, the nature of the discrepancy should be stated clearly.

      Response to Recommendation #2-3: Thank you for this important comment. Following the reviewer’s recommendation, we have revised the manuscript as follows

      [P7, L139] Our analysis of hematopoietic alternations with age revealed that age-associated transition patterns of immunophenotypically defined HSC and CMP in BM were not paralleled with myeloid cell in PB (Fig. 1 C).

      Recommendation #2-4: Figure 1B "(B) Average frequency of immunophenotypically defined HSC and progenitor cells in BM of 2-3-month mice (n = 6), 6-month mice (n = 6), 12-13-month mice (n = 6), {greater than or equal to} 23-month mice (n = 7).

      [Comment to the authors]: It should be stated in the figure and legend that the values are normalized to the 2-3-month-old mice.

      Response to Recommendation #2-4: Thank you for this comment. Figure 1B presents the actual measured values of each fraction in c-Kit positive cells in the bone marrow, without any normalization.

      Recommendation #2-5: "We 127 found that the frequency of immunophenotypically defined HSC in BM rapidly increased 128 up to the age of 12 months. After the age, they remained plateaued throughout the 129 observation period (Fig. 1 B)."

      [Comment to the authors]: The evidence for a 'plateau', where HSC numbers don't change after 12 months is weak. It appears that the numbers increase continuously (although less steep) after 12 months. I thus recommend adjusting the wording to better reflect the data.

      Response to Recommendation #2-5: We thank the reviewer for the comments above and have incorporated these suggestions in our revision as follows. 

      [P6, L126] We found that the frequency of immunophenotypically defined HSC in BM rapidly increased up to the age of 12 months. After the age, the rate of increase in their frequency appeared to slow down.

      Recommendation #2-6: Figure 2G: [Comment to the authors]: Please add the required statistics, please check carefully all figures for missing statistical tests.

      Response to Recommendation #2-6: Thank you for these important comments. In response, we have added the results of the significance tests for Figures 1A, 1C, 4C, and S5.

      Recommendation #2-7: "If bulk-HSCs isolated from aged mice are already enriched by myeloid-biased HSC clones, we should see more myeloid-biased phenotypes 16 weeks after primary and the secondary transplantation. However, we found that kinetics of the proportion of myeloid cells in PB were similar across primary and the secondary transplantation and that the proportion of myeloid cells gradually decreased over time (Fig. 2 G). These results suggest the following two possibilities: either myeloid-biased HSCs do not expand in the LT-HSC fraction, or the expansion of myeloid-biased clones in 2-year-old mice has already peaked."

      [Comment to the authors]: Other possible explanations include that the observed reduction in myeloid reconstitution over 16 weeks reflects the time required to return to homeostasis. In other words, it takes time until the blood system approaches a balanced output.

      Response to Recommendation #2-7: We agree with the reviewer's comment. As the reviewer pointed out, the gradual decrease in the proportion of myeloid cells over time is not related to our two hypotheses in this part of the manuscript but rather to the hematopoietic system's process of returning to a homeostatic state after transplantation. Therefore, the original sentence could be misleading, as it is part of the section discussing whether age-associated expansion of myeloid-biased HSCs is observed. Based on the above, we have revised the sentence as follows.

      [P8, L179] However, we found that kinetics of the proportion of myeloid cells in PB were similar across the primary and the secondary transplantation (Fig. 2 G). These results suggest the following two possibilities: either myeloid-biased HSCs do not expand in the LTHSC fraction, or the expansion of myeloid-biased clones in 2-year-old mice has already peaked.

      Recommendation #2-8: It is also important to consider that the transplant results are highly variable (see large standard deviation), therefore the sensitivity to detect smaller but relevant changes is low in the shown experiments. As the statistical analysis of these experiments is missing and the power seems low these results should be interpreted with caution. For instance, it appears that the secondary transplants on average produce more myeloid cells as expected and predicted by the classical clonal expansion model.

      Regarding "expansion of myeloid-biased clones in 2-year-old mice has already peaked". This is what the author suggested above. It might thus not be surprising that HSCs from 2-year-old mice show little to no increased myeloid expansion.

      Response to Recommendation #2-8: Thank you for providing these insights. The primary findings of our study are based on functional experiments presented in Figures 2, 3, 5, 6, and 7. In Figure 3, there was no significant difference between young and aged LT-HSCs, with mean values of 51.4±31.5% and 47.4±39.0%, respectively (p = 0.82). Given the lack of difference in the mean values, it is unlikely that increasing the sample size would reveal a significant change. For ethical reasons, to minimize the use of additional animals, we conclude that LT-HSCs exhibit no change in lineage output throughout life based on the data in Figure 3. Statistically significant differences observed in Figures 2, 5, 6, and 7 further support our conclusions.

      Additionally, because whole bone marrow cells were transplanted in the secondary transplantation, there may be various confounding factors beyond the differentiation potential of HSCs. Therefore, we consider that caution is necessary when evaluating the differentiation capacity of HSCs in the context of the second transplantation.

      Recommendation #2-9: Figure 7C: [Comment to the authors]: The star * indicates with analyzed BM. As stars are typically used as indicators of significance, this can be confusing for the reader. I thus suggest using another symbol.

      Response to Recommendation #2-9: We appreciate the reviewer for this comment and have incorporated the suggestion in the revised manuscript. We have decided to use † instead of the star*.

      Reviewer #3 (Recommendations For The Authors):

      Recommendation #3.1: In Figure 1A, the authors show the frequency of PB lineages (lymphoid vs myeloid) in mice of different ages. It would be great if they could show the same data for each subpopulation including these two main categories individually (granulocytes, monocytes, B cells, T cells...).

      Response to Recommendation #3-1: We thank for this suggestion. We provide the frequency of PB lineages (granulocytes, monocytes, B cells, T cells, and NK cells) in mice of different ages.

      Author response image 5.

      Average frequency of neutrophils, monocytes, B cells, T cells, and NK cells in PB analyzed in Figure 1A. Dots show all individual mice. *P < 0.05. **P < 0.01. Data and error bars represent means ± standard deviation. 

      Recommendation #3.2: It would be great if data from young mice could be shown in parallel to the graphs in Figure 2A.

      Response to Recommendation #3-2: We thank the reviewer for the comments above and have incorporated these suggestions in Figure 2A. 

      [P34, L916] (A) Hoxb5 reporter expression in bulk-HSC, MPP, Flk2+, and Lin-Sca1-c-Kit+ populations in the 2-year-old Hoxb5-tri-mCherry mice (Upper panel) and 3-month-old Hoxb5_tri-mCherry mice (Lower panel). Values indicate the percentage of mCherry+ cells ± standard deviation in each fraction (_n = 3). 

      Recommendation #3.3: Do the authors have any explanation for the high level of variability within the recipients of Hoxb5+ cells in Figure 2C?

      Response to Recommendation #3-3: Thank you for providing these insights. As noted in our previous report, transplantation of a sufficient number of HSCs results in stable donor chimerism, whereas a small number of HSCs leads to increased variability in donor chimerism1. Additionally, other studies have observed high variability when fewer than 10 HSCs are transplanted2-3. Based on this evidence, we consider that the transplantation of a small number of cells (10 cells) is the primary cause of the high level of variability observed.

      References

      (1) Nishi K, Sakamaki T, Sadaoka K, Fujii M, Takaori-Kondo A, Chen JY, et al. Identification of the minimum requirements for successful haematopoietic stem cell transplantation. Br J Haematol. 2022;196(3):711–23. 

      (2) Dykstra B, Olthof S, Schreuder J, Ritsema M, Haan G De. Clonal analysis reveals multiple functional defects of aged murine hematopoietic stem cells. J Exp Med. 2011 Dec 19;208(13):2691–703. 

      (3) Yamamoto R, Wilkinson AC, Ooehara J, Lan X, Lai CY, Nakauchi Y, et al. LargeScale Clonal Analysis Resolves Aging of the Mouse Hematopoietic Stem Cell Compartment. Cell Stem Cell [Internet]. 2018;22(4):600-607.e4. Available from: https://doi.org/10.1016/j.stem.2018.03.013

      Recommendation #3.4: Are the differences in Figure 3D statistically significant? If yes, please add statistics. Same for Figure 4C.

      Response to Recommendation #3-4: Thank you for providing these insights. For Figure 3D, we performed an ANOVA analysis for each fraction; however, the results were not statistically significant. In contrast, for Figure 4C, we have added the results of significance tests for comparisons between Young LT-HSC vs. Young Bulk-HSC.

      Recommendation #3.5: As a general comment, although the results in this study are interesting, the use of a Hoxb5 lineage tracing mouse model would be more valuable for this purpose than the Hoxb5 reporter used here. The lineage tracing model would allow for the assessment of lineage bias without the caveats introduced by the transplantation assays.

      Response to Recommendation #3-5: We appreciate the reviewer for the important comments. Following the reviewer’s recommendation, we have revised the manuscript as follows

      [P19, L451] In contrast, our findings should be considered in light of some limitations. In this report, we primarily performed ten to twenty transplantation assays. Therefore, the current theory should be revalidated using single-cell technology with lineage tracing system1-2. This approach will investigate changes in the self-renewal capacity of individual HSCs and their subsequent differentiation into progenitor cells and peripheral blood cells. 

      References

      (1) Yamamoto R, Wilkinson AC, Ooehara J, Lan X, Lai CY, Nakauchi Y, et al. LargeScale Clonal Analysis Resolves Aging of the Mouse Hematopoietic Stem Cell Compartment. Cell Stem Cell [Internet]. 2018;22(4):600-607.e4. Available from: https://doi.org/10.1016/j.stem.2018.03.013

      (2) Rodriguez-Fraticelli AE, Weinreb C, Wang SW, Migueles RP, Jankovic M, Usart M, et al. Single-cell lineage tracing unveils a role for TCF15 in haematopoiesis. Nature [Internet]. 2020;583(7817):585–9. Available from: http://dx.doi.org/10.1038/s41586-020-2503-6

    2. eLife Assessment

      The manuscript provides useful findings to explore the heterogeneity of hematopoietic stem cells and age-related myeloid-biased hematopoiesis. The results presented in this study are incomplete and additional data are necessary to bolster the conclusions. Certain aspects of the methods, experimental design, and data analyses remain inadequate and only partially support the central claims.

    3. Reviewer #1 (Public review):

      Summary

      In this study, Nishi et al. claim that the ratio of long-term hematopoietic stem cell (LT-HSC) versus short-term HSC (ST-HSC) determines the lineage output of HSCs and reduced ratio of ST-HSC in aged mice causes myeloid-biased hematopoiesis. Authors used Hoxb5 reporter mice to isolated LT-HSC and ST-HSC and performed molecular analyses and transplantation assays to support their arguments. How hematopoietic system becomes myeloid-biased upon aging is an important question with many implications in disease context as well. However, this study needs more definitive data.

      (1) Authors' experimental designs have some caveats to definitely support their claims. Authors claimed that aged LT-HSCs have no myeloid-biased clone expansion using transplantation assays. In these experiments, authors used 10 HSCs and young mice as recipients. Given the huge expansion of old HSC by number and known heterogeneity in immunophenotypically defined HSC populations, it is questionable how 10 out of so many old HSCs (an average of 300,000 up to 500,000 cells per mouse; Mitchell et al., Nature Cell Biology, 2023) can faithfully represent old HSC population. The Hoxb5+ old HSC primary and secondary recipient mice data (Fig. 2C and D) support this concern. In addition, they only used young recipients. Considering the importance of inflammatory aged niche in the myeloid-biased lineage output, transplanting young vs old LT-HSCs into aged mice will complete the whole picture.

      (2) Authors' molecular data analyses need more rigor with unbiased approaches. They claimed that neither aged LT-HSCs nor aged ST-HSCs exhibited myeloid or lymphoid gene set enrichment but aged bulk HSCs, which are just a sum of LT-HSCs and ST-HSCs by their gating scheme (Fig. 4A), showed the "tendency" of enrichment of myeloid-related genes based on the selected gene set (Fig. 4D). Although the proportion of ST-HSCs is reduced in bulk HSCs upon aging, since ST-HSCs do not exhibit lymphoid gene set enrichment based on their data, it is hard to understand how aged bulk HSCs have more myeloid gene set enrichment compared to young bulk HSCs. This bulk HSC data rather suggest that there could be a trend toward certain lineage bias (although not significant) in aged LT-HSCs or ST-HSCs. Authors need to verify the molecular lineage priming of LT-HSCs and ST-HSCs using another comprehensive dataset.

      (3) Although authors could not find any molecular evidence for myeloid-biased hematopoiesis from old HSCs (either LT or ST), they argued that the ratio between LT-HSC and ST-HSC causes myeloid-biased hematopoiesis upon aging based on young HSC experiments (Fig. 6). However, old ST-HSC functional data showed that they barely contribute to blood production unlike young Hoxb5- HSCs (ST-HSC) in the transplantation setting (Fig. 2). Is there any evidence that in unperturbed native old hematopoiesis, old Hoxb5- HSCs (ST-HSC) still contribute to blood production? If so, what are their lineage potential/output? Without this information, it is hard to argue that the different ratio causes myeloid-biased hematopoiesis in aging context.

    4. Reviewer #2 (Public review):

      Summary:

      Nishi et al, investigate the well-known and previously described phenomenon of age-associated myeloid-biased hematopoiesis. Using a previously established HoxB5mCherry mouse model, they used HoxB5+ and HoxB5- HSCs to discriminate cells with long-term (LT-HSCs) and short-term (ST-HSCs) reconstitution potential and compared these populations to immunophenotypically defined 'bulk HSCs' that consists of a mixture of LT-HSC and ST-HSCs. They then isolated these HSC populations from young and aged mice to test their function and myeloid bias in non-competitive and competitive transplants into young and aged recipients. Based on quantification of hematopoietic cell frequencies in the bone marrow, peripheral blood, and in some experiments the spleen and thymus, the authors argue against the currently held belief that myeloid-biased HSCs expand with age.

      While aspects of their work are fascinating and might have merit, several issues weaken the overall strength of the arguments and interpretation. Multiple experiments were done with a very low number of recipient mice, showed very large standard deviations, and had no statistically detectable difference between experimental groups. While the authors conclude that these experimental groups are not different, the displayed results seem too variable to conclude anything with certainty. The sensitivity of the performed experiments (e.g. Fig 3; Fig 6C, D) is too low to detect even reasonably strong differences between experimental groups and is thus inadequate to support the author's claims. This weakness of the study is not acknowledged in the text and is also not discussed. To support their conclusions the authors need to provide higher n-numbers and provide a detailed power analysis of the transplants in the methods section.

      As the authors attempt to challenge the current model of the age-associated expansion of myeloid-biased HSCs (which has been observed and reproduced by many different groups), ideally additional strong evidence in the form of single-cell transplants is provided.

      It is also unclear why the authors believe that the observed reduction of ST-HSCs relative to LT-HSCs explains the myeloid-biased phenotype observed in the peripheral blood. This point seems counterintuitive and requires further explanation.

      Based on my understanding of the presented data, the authors argue that myeloid-biased HSCs do not exist, as<br /> a) they detect no difference between young/aged HSCs after transplant (mind low n-numbers and large std!!!); b) myeloid progenitors downstream of HSCs only show minor or no changes in frequency and c) aged LT-HSCs do not outperform young LT-HSC in myeloid output LT-HScs in competitive transplants (mind low n-numbers and large std!!!).<br /> However, given the low n-numbers and high variance of the results, the argument seems weak and the presented data does not support the claims sufficiently. That the number of downstream progenitors does not change could be explained by other mechanisms, for instance, the frequently reported differentiation short-cuts of HSCs and/or changes in the microenvironment.

      Strengths:

      The authors present an interesting observation and offer an alternative explanation of the origins of aged-associated myeloid-biased hematopoiesis. Their data regarding the role of the microenvironment in the spleen and thymus appears to be convincing.

      Weaknesses:

      "Then, we found that the myeloid lineage proportions from young and aged LT-HSCs were nearly comparable during the observation period after transplantation (Fig. 3, B and C)."<br /> [Comment to the authors]: Given the large standard deviation and low n-numbers, the power of the analysis to detect differences between experimental groups is very low. Experimental groups with too large standard deviations (as displayed here) are difficult to interpret and might be inconclusive. The absence of clearly detectable differences between young and aged transplanted HSCs could thus simply be a false-negative result. The shown experimental results hence do not provide strong evidence for the author's interpretation of the data. The authors should add additional transplants and include a detailed power analysis to be able to detect differences between experimental groups with reasonable sensitivity.

      Line 293: "Based on these findings, we concluded that myeloid-biased hematopoiesis observed following transplantation of aged HSCs was caused by a relative decrease in ST-HSC in the bulk-HSC compartment in aged mice rather than the selective expansion of myeloid-biased HSC clones."<br /> Couldn't that also be explained by an increase in myeloid-biased HSCs, as repeatedly reported and seen in the expansion of CD150+ HSCs? It is not intuitively clear why a reduction of ST-HSCs clones would lead to a myeloid bias. The author should try to explain more clearly where they believe the increased number of myeloid cells comes from. What is the source of myeloid cells if the authors believe they are not derived from the expanded population of myeloid-biased HSCs?

    5. Reviewer #3 (Public review):

      In this manuscript, Nishi et al. propose a new model to explain the previously reported myeloid-biased hematopoiesis associated with aging. Traditionally, this phenotype has been explained by the expansion of myeloid-biased hematopoietic stem cell (HSC) clones during aging. Here, the authors question this idea and show how their Hoxb5 reporter model can discriminate long-term (LT) and short-term (ST) HSC and characterized their lineage output after transplant. From these analyses, the authors conclude that changes during aging in the LT/ST HSC proportion explain the myeloid bias observed.

      Although the topic is appropriate and the new model provides a new way to think about lineage-biased output observed in multiple hematopoietic contexts, some of the experimental design choices, as well as some of the conclusions drawn from the results could be substantially improved. Also, they do not propose any potential mechanism to explain this process, which reduces the potential impact and novelty of the study.

      The authors have satisfactorily replied to some of my comments. However, there are multiple key aspects that still remain unresolved.

    1. For instance, if a learner says to him ' Howshall I emphasise this idea?', the genius-writer willprobably be entirely at a loss : he will be unable tounderstand the state of mind of anyone who feels adifficulty here. He himself does the thing unconsciouslyand automatically : he ' knoweth not how '.

      It's difficult to teach when you've forgotten how you learned a thing yourself. It's hard to un-know a topic to empathize with the beginner.

    2. he English education does notencourage learners to think. They are generally told toreproduce the ideas of others, and, unless the questioncomes straight out of the Text-book, they often findthemselves quite unable to answer it.

      This statement follows the broad thesis that imitation is far easier than innovation.

    3. I often noticed that most Candidates inExaminations used to begin to write their Essays atonce. They never realised that their minds were there-by being distracted and divided among many differentprocesses, each of which is particularly hard even whentaken alone. For all at once their minds are being-called upon to Collect Ideas, to Select and decide whichare important, etc., to Arrange the Selected Ideas, andto Express them. To try all this as a single action is" most extraordinarily unscientific, even if a few brilliantgeniuses here and there have succeeded in the attempt.

      One of the major affordances of using a zettelkasten or card index for writing is that it forces the writer to break things down into their constituent parts, thereby making the entire process of writing far easier and less complex. One can separately focus their attention on the smaller steps of collecting, selecting, and arranging the material before beginning to actually write.

    4. For I do not think that the reason why so many peoplefail to write good Essays or to make good Speechesis so much that they are barren of Ideas, or that theirGrammar is bad, or even that their Expression is verybad ;

      he capitalizes five words here to emphasize their importance... I wonder what he says in his section on capitalization???

    5. I shall go upon the principleupon which the Romans went in their conquests, viz.' DIVIDE ET IMPERA ', ' Isolate what you have to master,and master it part by part'.
    6. The lesson surely is that to emphasise, in this way, anIdea which is felt to be important, is not an automaticprocess to most people ; it is not done instinctively, andby the light of nature. They may feel that the Ideaought to be Emphasised, but they do not know themeans.
    7. you will have to Collect and make a list ofyour Ideas (Headings and Sub- Headings) for the Essayor Speech. You will have to Select, deciding whichare to be used and which are not. You will have toArrange the selected Headings. And then you willhave to Express them — in itself not a simple task.

      the list of broad parts of writing an essay

    8. They haveto move step by step and with effort over the groundwhich the genius covers with a flying leap.
    9. He must analysethe whole stroke, and must not attempt to do it asif it were a single unit. It is true that the bornplayer, by the light of genius, does the whole stroke asa whole stroke, and perhaps is not aware that it can feedivided into parts : he may even deny it. None theless it has often been proved that it can be divided intoparts, and that to master each part separately is a mucheasier .process than to -master the whole -at once. It is -notgoing too far to say that for average people to masterthe whole stroke at once is an absolute impossibility.

      Interesting to see this tennis analogy in writing in 1905 from a top-notch player who will win a silver metal in the 1908 Olympics...

    10. Miles, Eustace Hamilton. How to Prepare Essays, Lectures, Articles, Books, Speeches and Letters, with Hints on Writing for the Press. London: Rivingtons, 1905. http://archive.org/details/howtoprepareessa00mileuoft.

    1. Memory is enhanced when con-cepts can be acted out by the learner

      Another takeaway from this chapter that piqued my interest was the discussion about how dramatic play and acting can be a good way of integrating knowledge. It says "Memory is enhanced when concepts can be acted out by the learner" (Harlan, Rivkin 12). This was interesting to me because one of the questions I get the most about acting is "How do you memorize all of those lines?" I could never really put it into a concise or logical way as to how I can do it, but reading about how acting out concepts can enhance memory makes total sense! In my case, the concept that is being acted out is the character I am playing, including their lines, emotions, and physical movements.

    Annotators

    1. One employee suggested that Adobe should come up with "a long-term communication and marketing plan outside of blog posts," and meet with the company's most prominent critics on YouTube and social media to "correct the misinformation head-on.""Watching the misinformation spread on social media like wildfire is really disheartening," this person wrote in Slack. "Still, a loud 'F Adobe' and 'Cancel Adobe' rhetoric is happening within the independent creator community that needs to be addressed."A third worker said the internal communication review process might be broken. "What are we doing meaningfully to prevent this or is this only acted on when called out?" the person wrote.
    2. It's unclear how this information is accessed, and whether the creators of the data can opt out or get paid.
    3. Adobe upset many artists and designers recently by implying it would use their content to train AI models. The company had to quell those concerns with a blog post denying this.But some Adobe employees are still not happy with the response, and they are calling for improved communication with customers.According to screenshots of an internal Slack channel, obtained by Business Insider, Adobe employees complained about the company's poor response to the controversy and demanded a better long-term communication plan. They pointed out that Adobe got embroiled in similar controversies in the past, adding the internal review process needed to be fixed. This story is available exclusively to Business Insider subscribers. Become an Insider and start reading now. Have an account? Log in. "If our goal is truly to prioritize our users' best interests (which, to be honest, I sometimes question), it's astonishing how poor our communication can be," one of the people wrote in Slack. "The general perception is: Adobe is an evil company that will do whatever it takes to F its users.""Let's avoid becoming like IBM, which seems to be surviving primarily due to its entrenched market position and legacy systems," this Adobe employee added.
  2. docdrop.org docdrop.org
    1. "It's a lot of pressure for them. It's the one thing my husband and I don't like about this school. Academically, you have to [work hard] to get into top schools, unfortunately, [but] they're taking the fun out of it."

      I like this quote because it tells people the drawback of having a school with lots of opportunities. kids don't have time to be kids and that's something that they can't get back. they work hard to compete against one another, striving to be better than on another that they forget to be themselves and do the things that they want to do. In another class that i was in, we talked about how competition has a certain limit and eventually everyone will be trying to reach goals that are impossible for someone to achieve. If every kid have these good grades and extracurricular activities, the disparity between people from these students and everyone else competing for top school admission will continue to grow.

    1. A wired connection to headphones, receivers, or powered speakers

      Just fucking kill me.

      Despite knowing this had to be the truth - unless God had finally answered at least one of my prayers about intervening directly with The Bluetooth Specification - I'd never actually plugged my QuietComfort 45s into any one of the devices upon which I've had Lossless audio turned on for years... until just now.

    1. Legally, police officers can’t strike. But they can “work-to-rule,” doing only the most necessary duties.

      Yet we see this all the times, police officers taking course of their own actions and doing what they want. We saw this in the Geroge Floyd incident which officers took serious aggression without any harmful intent from Mr. Floyd. I think after that incident however, officers were more tamed given they recognized the amount of blacklashing the officers in the incident got.

    2. Proactive policing also disrupts communal life, which can drain social control of group-level violence.

      Proactive policing can disrupt communal life by increasing surveillance and law enforcement presence, which may weaken trust and cooperation within communities. The social bonds can undermine informal social controls that lead to worse results.

    1. eLife Assessment

      This valuable study investigates both online responses to, and offline replay of, visual motion sequences. Sophisticated EEG analyses provide solid evidence for both feature-specific and non-specific sequence representations, though the explanation of the statistical methods used is currently incomplete.

    2. Reviewer #1 (Public review):

      Summary:

      The study identifies two types of activation: one that is cue-triggered and non-specific to motion directions, and another that is specific to the exposed motion directions but occurs in a reversed manner. The finding that activity in the medial temporal lobe (MTL) preceded that in the visual cortex suggests that the visual cortex may serve as a platform for the manifestation of replay events, which potentially enhance visual sequence learning.

      Strengths:

      Identifying the two types of activation after exposure to a sequence of motion directions is very interesting. The experimental design, procedures, and analyses are solid. The findings are interesting and novel.

      Weaknesses:

      It was not immediately clear to me why the second type of activation was suggested to occur spontaneously. The procedural differences in the analyses that distinguished between the two types of activation need to be a little better clarified.

    3. Reviewer #2 (Public review):

      This paper shows and analyzes an interesting phenomenon. It shows that when people are exposed to sequences of moving dots (that is moving dots in one direction, followed by another direction, etc.), showing either the starting movement direction or ending movement direction causes a coarse-grained brain response that is similar to that elicited by the complete sequence of 4 directions. However, they show by decoding the sensor responses that this brain activity actually does not carry information about the actual sequence and the motion directions, at least not on the time scale of the initial sequence. They also show a reverse reply on a highly compressed time scale, which is elicited during the period of elevated activity, and activated by the first and last elements of the sequence, but not others. Additionally, these replays seem to occur during periods of cortical ripples, similar to what is found in animal studies.

      These results are intriguing. They are based on MEG recordings in humans, and finding such replays in humans is novel. Also, this is based on what seems to be sophisticated statistical analysis. However, this is the main problem with this paper. The statistical analysis is not explained well at all, and therefore its validity is hard to evaluate. I am not at all saying it is incorrect; what I am saying is that given how it is explained, it cannot be evaluated.

    1. eLife Assessment

      This important study advances our understanding of the role of dopamine in modulating pair bonding in mandarin voles by examining dopamine signaling within the nucleus accumbens across various social stimuli using state-of-the-art causal perturbations. The evidence supporting the findings is compelling, particularly cutting-edge approaches for measuring dopamine release as well as the activity of dopamine receptor populations during social bonding. However, statistical analyses were found to lack rigor and clarity, and the lack of complementary experiments in females was noted as a weakness. Additionally, the manuscript would be strengthened by placing findings within a broader framework, such as by highlighting similarities and/or differences between mandarin and prairie voles.

    2. Reviewer #1 (Public review):

      These experiments are some of the first to assess the role of dopamine release and the activity of D1 and D2 MSNs in pair bond formation in Mandarin voles. This is a novel and comprehensive study that presents exciting data about how the dopamine system is involved in pair bonding. The authors provide very detailed methods and clearly presented results. Here they show dopamine release in the NAc shell is enhanced when male voles encounter their pair bonded partner 7 days after co-habitation. In addition, D2 MSN activity decreases whereas D1 MSN activity increases when sniffing the pair-bonded partner.

      The authors do not provide justification for why they only use males in the current study, without discussing sex as a biological variable these data can only inform readers about one sex (which in pair-bonded animals by definition have 2 sexes). In addition, the authors do not use an isosbestic control wavelength in photometry experiments, although they do use EGFP control mice which show no effects of these interventions, a within-subject control such as an isosbestic excitation wavelength could give more confidence in these data and rule out motion artefacts within subjects.

      There is an existing literature (cited in this manuscript) from Aragona et al., (particularly Aragona et al., 2006) which has highlighted key differences in the roles of rostral versus caudal NAc shell dopamine in pair bond formation and maintenance. Specifically, they report that dopamine transmission promoting pair bonding only occurs in the rostral shell and not the caudal shell or core regions. Given that the authors have targeted more caudally a discussion of how these results fit with previous work and why there may be differences in these areas is warranted.

      The authors could discuss the differences between pair bond formation and pair bond maintenance more deeply.

      The authors have successfully characterised the involvement of dopamine release, changes in D1 and D2 MSNs, and projections to the VP in pair bonding voles. Their conclusions are supported by their data and they make a number of very reasonable discussion points acknowledging various limitations.

    3. Reviewer #2 (Public review):

      Summary:

      Using in vivo fiber-photometry the authors first establish that DA release when contacting their partner mouse increases with days of cohabitation while this increase is not observed when contacting a stranger mouse. Similar effects are found in D1-MSNs and D2-MSNs with the D1-MSN responses increasing and D2-MSN responses decreasing with days of cohabitation. They then use slice physiology to identify underlying plasticity/adaptation mechanisms that could contribute to the changes in D1/D2-MSN responses. Last, to address causality the authors use chemogenetic tools to selectively inhibit or activate NAc shell D1 or D2 neurons that project to the ventral pallidum. They found that D2 inhibition facilitates bond formation while D2 excitation inhibits bond formation. In contrast, both D1-MSN activation and inhibition inhibit bond formation.

      Strengths:

      The strength of the manuscript lies in combining in vivo physiology to demonstrate circuit engagement and chemogenetic manipulation studies to address circuit involvement in pair bond formation in a monogamous vole.

      Weaknesses:

      Weaknesses include that a large set of experiments within the manuscript are dependent on using short promoters for D1 and D2 receptors in viral vectors. As the authors acknowledge this approach can lead to ectopic expression and the presented immunohistochemistry supports this notion. It seems to me that the presented quantification underestimates the degree of ectopic expression that is observed by eye when looking at the presented immunohistochemistry. However, given that Cre transgenic animals are not available for Microtus mandarinus and given the distinct physiological and behavioral outcomes when imaging and manipulating both viral-targeted populations this concern is minor.

      The slice physiology experiments provide some interesting outcomes but it is unclear how they can be linked to the in vivo physiological outcomes and some of the outcomes don't match intuitively (e.g. cohabitation enhances excitatory/inhibitory balance in D2-MSNs but the degree of contact-induced inhibition is enhanced in D2-MSN).

      One interesting finding is that the relationship between D2-MSN and pair bond formation is quite clear (inhibition facilitates while excitation inhibits pair bond formation). In contrast, the role of D1-MSNs is more complicated since both excitation and inhibition disrupt pair bond formation. This is not convincingly discussed.

      It seemed a missed opportunity that physiological readout is limited to males. I understand though that adding females may be beyond the scope of this manuscript.

    4. Reviewer #3 (Public review):

      Summary:

      The manuscript is evaluating changes in dopamine signaling in the nucleus accumbens following pair bonding and exposure to various stimuli in mandarin voles. In addition, the authors present chemogenetic data that demonstrate excitation and inhibition of D1 and D2 MSN affect pair bond formation.

      Strengths:

      The experimental designs are strong. The approaches are innovative and use cutting-edge methods. The manuscript is well written.

      Weaknesses:

      The statistical results are not presented, and not all statistical analyses are appropriate. Additionally, some details of methods are absent.

    1. An interesting point that was made was the fact that the developers have to put constraints on the data and the fields that can be used. They do this to fit their specific target audience, but it is also interesting that people who do not fit these data constraints must find ways to make themselves fit in in order to use social media apps. Developers should prioritize inclusiveness more.

    1. I found that the protesting donkey is a perfect analogy for the situation with bots. It's hard to punish the protesting donkeys, who are, in this case, the people using the bots that were programmed by programmers for using bots that they don't understand the purpose of.

  3. learn-us-east-1-prod-fleet02-xythos.content.blackboardcdn.com learn-us-east-1-prod-fleet02-xythos.content.blackboardcdn.com
    1. etween 1929 and 1932, international trade dropped from $36billion to only $12 billion. American exports fell by 78 percent. Com-bined with overproduction and declining domestic consumption, the tar-iff exacerbated the world’s economic collapse.

      The United States was and still is a major global economic superpower. The American Great Depression was so extreme, it did more than just damage the United States.

    2. “Change is in the very air Americans breathe, and consumer changesare the very bricks out of which we are building our new kind of civi-lization,” announced marketing expert and home economist ChristineFrederick in her influential 1929 monograph, Selling Mrs. Consumer.

      Did the beginning of the mass consumerism era start when the industrial revolution started to take off? How is American consumer culture different today than it was when it started?

    3. Women reacted to the war preparations by joining several militaryand civilian organizations. Their enrollment and actions in these orga-nizations proved to be a pioneering effort for American women in war.

      How did this affect the way that women were viewed through the lens of misogyny? Did this help shatter the barrier between what was considered traditionally male and traditionally female?

    4. Confronted by both the benefitsand the ravages of industrialization, many Americans asked themselves,“What Would Jesus Do?” In 1896, Charles Sheldon, a Congregationalminister in Topeka, Kansas, published In His Steps: What Would JesusDo?

      Religion was also used to justify and bring the need for a reform. Using Christianity, the religion the country and government was based on

    5. In1890, New York City journalist Jacob Riis published How the OtherHalf Lives, a scathing indictment of living and working conditions in thecity’s slums. Riis not only vividly described the squalor he saw, he docu-mented it with photography, giving readers an unflinching view of urbanpoverty. Riis’s book led to housing reform in New York and other citiesand helped instill the idea that society bore at least some responsibilityfor alleviating poverty.

      Publication and reports brought more attention to the situation causing the government and people to take action.

    6. XII. equal rights and the new Deal

      The New Deal did little to exercise rights to African Americans

    1. is designed to assist students without a background or appreciation of Medieval history.

      I also agree with this statement. Because without this knowledge, we tend to undervalue the effort required to advance existing technology into something more modern and improved.

    1. It is by such means that these evangelicalworkers snatch away from the gates of Hell numbers of souls which would never haveenjoyed a blissful eternity without the charitable aid of these generous missionaries.

      This provides another example of the perspective that was commonly held by missionaries; that they were saving souls by converting them.

    1. Question #1. Where is the location of the study and why do you think there are complex human dimension of wildlife conflicts higher than other locations in North America? - As we read the article we can learn that the location of the study is in a 23,700km^2 area of southwestern Alberta and was bounded by the HighWood River to the north, British Columbia to the west, and Montana to the South. In my opinion, I think that there are complex human dimensions of wildlife conflict higher here than in other locations in North America due to a over population that lack of protective barriers between humans and wildlife areas and the increase in urban zones or cities. What do you think could be a good solving solution to this problem between wildlife and humans?

    2. Ecology and Society 22(3): 4https://www.ecologyandsociety.org/vol22/iss3/art4/Fig. 3. Large carnivore incidents by species and type (grizzlybear, Ursus arctos; black bear, Ursus americanus; wolf, Canislupus; and cougar, Puma concolor). Percentages are cumulativeover 1999 through 2014

      Personal Question: How would this data change if we compared these species in a more remote ares with less human involvement vs an area that is frequently populated with people such as the Lake Tahoe area?

    3. Similar to the patterns found by our occurrence record review,crops, food waste, and livestock carcasses feature prominently inthe diet of ursids across the globe; killing of livestock occurs lessfrequently (Newsome et al. 2015). Both black bears and grizzlybears preferentially select mixed diets (Erlenbach et al. 2014,Coogan and Raubenheimer 2016, Costello et al. 2016). Forexample, in a recent study in Wyoming bears consumed 1–20different foods per day, with an average of 7.3 (Costello et al.2016). Black bear use of human-settled areas and associated foodsources often increases when natural foods are scarce (Howe etal. 2010, Baruch-Mordo et al. 2014, Lewis et al. 2014). Althoughnot monitored, a poor berry year and decreased natural foods in2014 could explain some of the observed 2014 increase in blackbear incidents. In our study, black bear incidents werepredominately attributable to attractants including garbage,birdfeeders, and vegetation.

      Question 2:

      According to this paper, bears and wolves have very different diets. Bears are considered omnivores and will eat both vegetation and meat depending on the season and what is available. They also feed on food that has been set out by humans such as bird feed and garbage. Wolves on the other hand are strictly carnivorous and do not feed on vegetation.

    1. If we could establish an identity for the narrator, we felt, we might bewell on the way to an explanation of how this document — let me call it thatfor the sake of brevity — came into being.

      Satirical

    Annotators

    1. he policies that spring from ecological economics aim to reduce wealth inequality, via salary and luxury caps; to regulate advertisements for Earth-damaging products; and to reduce the workweek to alleviate employment pressures (to name a few

      siehe 10.1038/d41586-022-04412-x

    2. Argumente für die Verbindung von ecological economics, Dekolonisierung, degrowth, notwendiger ökologischer Transformation und Bioregionalismus. Der verbindende Faktor ist das Wachstum der Wirtschaft in den High Income Countries durch Ausbeutung von global verteilten ökologischen Ressourcen.

    1. The artifacts were contained incardboard boxes and plastic washing-up bins and stored on open shelves.

      idk much about storing artifacts but I don't think it should be stored in a cardboard box.

    1. Quakers

      What are the most important of the Quakers' beliefs?

      Cite your sources.

    2. the Tsar’s own challenges with religious sectarians in Russia

      What were these challenges?

      Cite your sources.

    3. British tobacco merchants monopoly rights in Russia, expanding the market for a key colonial American export.

      Explain this chain! British tobacco merchants sold to Russia, yet it expanded the US market. How did this work?

      Cite your sources.

    4. rapid industrialization

      Describe how and when industriallization took place in each country, Russia and the US.

      Cite your sources.

    5. subsequent emancipation

      When did slavery end in Russia and in the US? In what ways was the emancipation of slaves similar and different in each country?

      Cite your sources.

    6. internal colonization across a great plain;

      How do these compare? How big (square miles) was the Russian Empire in the 18th Century? What about the United States?

      Cite your sources.

    1. Statements

      an instruction that tells the computer to perform a specific action

    1. The desire for the salvation of these newconverts inflamed him, or better intoxicated him so that last year he did the impossible tocome back to them; he took to the sea, but instead of landing on their beaches, he wasthrown on foreign lands and was finally obliged to return to France.

      This demonstrates the concept that we discussed in class that these missionaries thought of them selves as being sent by god to save the "savages". They genuinely thought that converting to Catholicism was the best thing that could be done for Indigenous peoples. This particular passage demonstrates the extremes that missionaries were willing to endure in order to achieve this goal.

    2. He spoke the foreign language of the Abenakis of this territory, and by his great virtue, byhis religious conversations, he prepared many infidels for the faith; he even converted manyof them by teaching them the articles of our faith in a simple but effective way.The previous year, in 1654, the second of the two missionaries, the most venerable FatherBalthazar of Paris had already returned to France. This father speaks the language of thenatives of the region where he lived, as well as the French language, and with the help ofGod, he converted more Abenakis than all the other missionaries.

      De Paris references two other missionaries who had great success in converting many Indigenous people and highlights a key feature of both of these men; the fact that they could converse with the Indigenous peoples that they worked with. Having learned the language likely facilitated their abilities to gain trust and form relationships with these communities which likely enabled them to convert more people.

    1. Figure 1

      The figure title is too long. It simply needs to describe that the graph shows the relationship between Concentration of Sugar and Density.

      An appropriate title would be "Relationship Between Sugar Concentration and Density"

    2. , the

      There should have either been a tiny more explanation or just a period there. "...beaker. The..."

    3. from a total of six standards: 0, 2, 4, 8and 16 percent sugar

      I don't think this is needed. The method should only state what you used.

    4. graduated cylinder

      Should specify the volume

    5. 10 mL

      Probably shouldnt say the 10 mL pipette measured out 10mL of fluid. just say itonce.

    6. Questions 1-5 in the lab packet

      Reader does not have access to the lab packet.

    1. grams

      The volume was in milliliters (mL).

    2. Density of solids and liquids

      The words longer than three letters should be capitalized.

      It should be "Density of Solids and Liquids"

    3. balance

      The type of balance used isn't specified.

    4. PreparaƟon and Materials

      There doesn't need to be a sub header introducing each step. Especially if the sub header is introducing new materials. It is better to just say, the 50mL beaker was filled with solution B.

    5. were taken via

      "the volumetric pipette was filled with 10mL"

    6. this graph

      This is not passive voice because the author was pointing out a specified graph.

    7. Foremost,

      Unneeded. This could have started as: "The 50mL beaker was measured by an electronic balance."

    8. The cylinder

      What was its volume? What type of cylinder was it?

    9. the balance.

      Present tense.

    10. The mass of the liquid was calculated by subtracƟng the iniƟal mass of the beaker fromthe final mass of the beaker and liquid. The volume of the liquid was 10.00 mL, as it is aconstant. The density was determined using equaƟon 1.

      This should be passive voice.

    11. 𝑑𝑒𝑛𝑠𝑖𝑡𝑦 = ௠௔

      This should have gone into the introduction section.

    12. od by the finalvolume.

      This is incorrect, as the students should have used the difference between the final volume and the initial volume, to get the volume of the rod.

    1. Even top stars including Raheem Sterling, Paul Pogba and Marcus Rashford were subjected to sickening online hate, prompting players to organise a boycott of social media for 24 hours last April as part of the #Enough campaign.

      I can research the #Enough campaign more

    2. If we beat Leicester for example, I'll have Leicester fans calling me a whatever. It's not right, but that's what will happen. If we draw and I make a mistake, I'll get something. If we win, I'll still get aggro.

      he receives constant backlash no matter the result

    3. "Years ago, [after a game], the first thing the players do is get their phone, call the wife or their girlfriend, their father or mother. In this moment, the first thing they do is to post something in Instagram.

      showcases the shift in just a few years and how important social media has been made

    4. inescapable part of modern life.

      this is coming from arguably the best manager in the world

    5. young kids

      popular with the younger athletes

    6. That player, subconsciously, is thinking 'Don't mess up; I don't want to look a fool on the internet

      this can't be healthy for mental health

    7. Its biggest strength is its biggest weakness: the real time, almost entirely unfiltered interaction between anyone, anywhere in the world.

      the fact that it's unfiltered interactions is probably the most important part here

    1. 123, 96, 244, 159, and 124 degrees

      observe the numbers on the angles are multiples of 30

    2. people who took the time to make the samples provided by

      Yes, I should have mentioned that.

    3. SmartScan

      need to flatten image; caption not quite matches the content, it is not a PtTe2 image, it is an image of a PtTe2 flake on top of a substrate.

    4. found to be 835.3 nm with an

      Looking at the fit; you can see that it is a very poor fit, so the correlation length must be much less known. It is the average particle size, but here you only have one particle (flake), so the error would be quite large.

    5. nanoAfm

      nanoAFMr is the correct spelling; needs citation!

    6. igure 3: Image

      This is not the topography, but the error image.

    7. 2024913_PHYS545_JCCBAB_AFM_T020200122Si16

      not needed in the report; again in the notebook, but in the report those details are "hidden" in the code portion.

    8. T020200122Si16

      Sample name is good for notebooks; however, in the report, we rename the sample usually to something simpler, such as the gold sample, etc.

    9. seconds

      s, also use 333.2 kHz (note the spacing)

    1. Essential Understandings Regarding Montana Indians 18In 1830, President Andrew Jackson asked Congress to pass a bill providing for the removal of all easterntribes to west of the Mississippi River, which was designated as “Indian Territory.”

      Didn't know that all previous treaties were just ignored.

    2. hey entered into treaties ofcommerce and military alliances with Indian nations

      Didn't know there was military alliances with tribes during the colonial period

    1. calibration standard

      The calibration standard was determined by the class and it should not be mentioned where the data came from just how it was obtained

    2. With that information it is used to gather the density of the rod. First subtractthe initial volume from the final volume, take the answer and input it into equation 1 asthe volume or “v” in this case, the result given is the density of the rod.

      This part should be in past tense

    3. with percent sucrose on thex-axis and density on the y-axis.

      This information could already have been interpreted from Figure 1

    4. That completes thesteps and then repeat the process three times for each beverage i

      This isn't in past tense, and its also in a step by step process. Should be restated at "The steps are then repeated."

    5. 1Density

      This title isn't the most formal, doesn't quite make sense.

    6. There was a measurement of the initial volume and finalvolume.

      This should be stated before adding the metal rod in.

    7. the x value should be % sucrose

    8. Picture

      The graph should go in the R+D Section.

    9. ther the three density reco

      This is an equation disguised as a method, and thus should have gone into the introduction section.

    10. approximately 11 mL with wate

      You shouldn't be less specific. You should say something like, "The graduated cylinder was filled half way."

    11. y=mx+b

      This should have gone in the introduction section, with the rest of the equations used in the lab.

    12. 𝑚

      Does not explain the measurement the "m" value is using

    13. After doing the three trials calculate the averagedensity by adding to

      Still not passive voice

    14. First subtractthe initial volume from the final volume, take the answer and input it into equation 1 asthe volume or “v” in this case, the result given is the density of the rod

      Not in passive voice.

    1. calculate

      should be in the passive voice

    2. use

      use the passive voice

    3. To calculate the sugar content for the cranberry juice and the root beer, first calculatethe average density of the celebration standard, 2% sugar. This is found by first subtracting thefinal mass of both the beaker and the liquid by the initial mass of just the beaker to find theliquid's mass of the 2% sugar. Then using the density equation d=m/v where d= density, v=volume and m=mass. Use the mass found by subtracting the final and initial and divide it bythe constant 10 mL of 2% sugar. Then repeat this for each trial, it was repeated 2 more times fora total of 3 more times. Using the 3 density’s find the average by adding all the desitys of 2%sugar and dividing it by 3. These calculations where completed for both the cranberry juice andthe root beer. After calculating each of those using the calibration standard averages of theclass for the sugar % create a plot graph and a trend line (Graph 1). Using the trend lineequation where x represents the % sugar content and y represents the density in g/mL,substitute the average density of both cranberry juice and the root beer into the y of the trendline equation. Then solve for x, the % sugar content.

      Past tense, equation needs proper format and check grammar.

    4. fill the 10 mL volumetric pipette and filler to 10.00 mLof 2% sugar

      the end of sentence is repeated and can just be said with "Then the pipette was filled up to 10mL of 2% sugar." or some other replaceable sentence and remove first part.

    5. To begin use a 125 mL Erlenmeyer flask and fill it with about 50 mL of 2% sugar liquid.Measure a 50 mL beaker by using a balance, record value. Then using that 50 mL beaker and a10 mL volumetric pipette plus pipette filler, fill the 10 mL volumetric pipette and filler to 10.00 mLof 2% sugar. Put the liquid in the volumetric pipette into the 50mL beaker that was previouslymeasured. Next measure and record the mass of the beaker using the balance. This processwas repeated 2 more times for a total of 3 trials Then using a cranberry juice using the samesteps and doing a total of 3 trials. Once more do the same steps using root beer for a total of 3trials.

      Needs to be in past tense. Also use actual equation set up.

    6. Next measure and record the mass of the beaker using the balance. This processwas repeated 2 more times for a total of 3

      It goes from steps back to past tense. It doesn't entirely make sense given that this should all be in past tense and not in a step by step format like how this sentence describes. The first sentence is in present tense to begin with, instead it should be "The mass of the beaker was then recorded using a balance."

    7. Using a balance, place weigh paper on it and zero the scale. Using that measure a metalrod and record measurement. Then take a 25 mL graduated cylinder and fill about half withwater then record the exact volume. In the graduated cylinder add the metal rod, record the newvolume.

      This should be written in past tense.

    8. Using a balance, place weigh paper on it and zero the scale. Using that measure a metalrod and record measurement.

      The methods section should be in the past tense. This section is in the present tense.

    9. Using a balance, place weigh paper on it and zero the scale. Using that measure a metalrod and record measurement. Then take a 25 mL graduated cylinder and fill about half withwater then record the exact volume. In the graduated cylinder add the metal rod, record the newvolume

      This section is in the present tense and should be in the past tense.

    10. To calculate the density of a metal rod, the mass and volume of the metal rod needed tobe found.

      Nothing should "need" to be found out, the methods section should state that it was found and how,

    11. Then using the density equation d=m/v where d= density, v=volume and m=mass

      these equations should be formatted rather than just written in regular text.

    12. Using a balance, place weigh paper on it and zero the scale. Using that measure a metalrod and record measurement. Then take a 25 mL graduated cylinder and fill about half withwater then record the exact volume

      These sentences are not all complete sentences and not in passive tense.

    1. Guest right don’t mean so much as it used to,” said the girl. “Notsince m’lady come back from the wedding. Some o’ them swingingdown by the river gured they was guests too.

      nooo

    2. “It was you killed the dog, m’lady,”

      ?///

    3. “Lady Stoneheart.”“Some call her that. Some call her other things. The Silent Sister.Mother Merciless. The Hangwoma

      fire names

    Annotators

    1. Upperhalf,humanhalf,twistedintheirdirection;alookofjoyandterrorintheinfant’seyes

      My initial reaction to this description of the infant was definitely shocking, and made me think more about societies standards for people because of the animal like description for this human. Also, looking closer at the second part of the sentence, the infant seems to feel free but terrified.

    1. . Connection with like-minded individuals from around the world 2. Access to valuable knowledge and expertise from online communities 3. Opportunities for collaboration and group projects 4. A sense of belonging and community

      Great Sections for the paper.

    1. After five years of unrequited toil, and unspeakable hardship in convict camps, - five years of slaving by the side of human brutes, and of nightly herding with them in vermin-haunted huts, - Ben Davis had become like them.

      The author is trying to convey the harsh reality of what injustice does to a person, and he is criticizing how many of his time do not see this suffering or choose to ignore it.

    2. There was a moment of breathless silence. Then a wild burst of grief from the prisoner's wife, to which his two children, not understanding it all, but vaguely conscious of some calamity, added their voices in two long, discordant wails, which would have been ludicrous had they not been heart-rending.

      This quote conveys realism by showing the range of human emotions such a verdict would cause.

    3. He had no doubt of the prisoner's guilt. There had been a great deal of petty thieving in the county, and several gentlemen had suggested to him the necessity for greater severity in punishing it. The jury were all white men.

      Possibly criticizing the Southern justice system during of time.

    4. "I 've got a monst'us good appetite ter-day. I feels good, too. I paid Majah Ransom de intrus' on de mortgage dis mawnin' an' a hund'ed dollahs besides, an' I spec's ter hab de balance ready by de fust of nex' Jiniwary; an' den we won't owe nobody a cent. I tell yer dere ain' nothin' like propputy ter make a pusson feel like a man. But w'at 's de Page 295 matter wid yer, Nancy ? Is sump'n' skeered yer?"

      The author is implying a strong southern using dialect to implement realism values.

    1. In how we’ve been talking about accessible design, the way we’ve been phrasing things has implied a separation between designers who make things, and the disabled people who things are made for. And unfortunately, as researcher Dr. Cynthia Bennett points out, disabled people are often excluded from designing for themselves, or even when they do participate in the design, they aren’t considered to be the “real designers.” You can see Dr. Bennet’s research talk on this in the following Youtube Video:

      It's paradoxical how people with disabilities are barred from designing systems that are meant to support them. The stigma of people with disabilities as people who are lesser than, or less capable of designing is an outdated notion. Designing for the disabled population from a purely able bodied perspective is a myopic view of the issue, and is bound to overlook issues.

    1. while avoiding perverse incentives

      I don't understand quite yet how perverse incentives are avoided. All the author mentions is that tasks can be "tracked, weighted and exposed", but how, and will that be enough? What's the incentive to track other tasks? Aren't we already all too busy with our own tasks anyways? It depends a lot on how those tasks are actually created, who will have input and control etc...

    1. Social engineering, where they try to gain access to information or locations by tricking people. For example:

      The flaw of many systems both in technology and in business supply chains is the human aspect. While technical and cybersecurity systems become more and more effective year by year, the vulnerabilities in human behavior is usually the weak link.

    1. What incentives do social media companies have to protect privacy?

      I think there are a handful of incentives that social media companies have to protect privacy. If a company offers good privacy to its users, they will respect the company more and are more likely to use it. Also if the company protects privacy there is less chance of them having to pay fines for violating people's privacy.

    2. What are your biggest concerns around privacy on social media?

      My biggest concern regarding privacy on social media and the internet in general is when people's actions shift from offline to online. This is when people's actions on the internet and in real life get muddied and it becomes really dangerous and difficult to prosecute.

    1. Datasets can be poisoned unintentionally. For example, many scientists posted online surveys that people can get paid to take. Getting useful results depended on a wide range of people taking them. But when one TikToker’s video about taking them went viral, the surveys got filled out with mostly one narrow demographic, preventing many of the datasets from being used as intended.

      Ensuring the integrity of datasets is vital to ensure their applications are useful. An issue presented in this case where the population taking such surveys overrepresents a certain consumer segment means that the output of any model that uses such survey data wouldn't be representative of the wider population.

    1. Social media sites then make their money by selling targeted advertising, meaning selling ads to specific groups of people with specific interests. So, for example, if you are selling spider stuffed animal toys, most people might not be interested, but if you could find the people who want those toys and only show your ads to them, your advertising campaign might be successful, and those users might be happy to find out about your stuffed animal toys. But targeting advertising can be used in less ethical ways, such as targeting gambling ads at children, or at users who are addicted to gambling, or the 2016 Trump campaign ‘target[ing] 3.5m black Americans to deter them from voting’ { requestKernel: true, binderOptions: { repo: "binder-examples/jupyter-stacks-datascience", ref: "master", }, codeMirrorConfig: { theme: "abcdef", mode: "python" }, kernelOptions: { kernelName: "python3", path: "./ch08_data_mining" }, predefinedOutput: true } kernelName = 'python3'

      Social media sites are financially incentivized to collect our data to sell to advertised. However, this has some unintended consequences such as targeting gambling ads towards children and perpetuating addictions. Consumer rights regarding data is paramount to ensure such practices are used ethically.

    1. In the Black Lives Matters protests of 2020, Dallas Police made an app where they asked people to upload videos of protesters doing anything illegal. In support of the protesters, K-pop fans swarmed the app and uploaded as many K-pop videos as they could eventually leading to the app crashing and becoming unusable, and thus protecting the protesters from this attempt at Police surveillance.

      First of all this is hilarious. However, this does veer near vigilantism which raises some ethical questions. At what point should individuals/unregulated groups take justice into their own hands. The issue arises in who gets to define what justice is and is not.

    1. Hazing: Causing difficulty or suffering for people who are new to a group Satire: (e.g., A Modest Proposal) which takes a known form, but does something unexpected or disruptive with it. Practical jokes / pranks

      All though these activities are trolling-adjacent I think there something special about truly trolling somebody on the internet. The fact that they don't know a thing about you and there's nothing about it is the cherry on top, which can never be recreated offline.

    1. Inauthentic interaction can even be valuable. We might outright lie to someone to cover our tracks when planning them a surprise party. Once the surprise is revealed, the inauthentic interactions can be retrospectively reinterpreted, and offense is not taken.

      The idea that inauthentic interaction is still valuable is an interesting concept. The entire concept of acting and theater is predicated on the paradoxical concept of authentic inauthenticity. The basis of a medium of artistic expression is the imitation of authenticity, yet it is this basis that allows them to connect authentically with the audience.

    1. St. Francis de Sales is the patron saint of deaf individuals. He is also the patron of journalists and writers because of his many written religious works. Because of these publications, he is depicted with a book in the left hand and a quill pen in the right. His feast day is January 24th.
    1. Stores and homes were looted and set on fire. When Tulsa firefighters arrived, they were turned away by white vigilantes. A number of eyewitness accounts described private aircraft being used to shoot into black crowds and drop turpentine firebombs onto black-owned buildings, suggesting the well-organized attack might have been planned in advance.

      The racism and hate were so extreme that many deaths and many lives lost. The suggestion that this was an organized attack just go to show how much hate they had.

    2. Women gained increased opportunities to work outside the home. The number of professional women rose significantly in the 1920s. But limits still existed,

      Equality was in the grasp but still the was the impression that women are only useful in the home.

    3. It was the decade of the “New Woman,” in which only 10 percent of married women (but nearly half of unmarried women) worked outside the home. It was a decade in which new technologies decreased time requirements for household chores, and one in which standards of cleanliness and order in the home rose to often impossible standards.

      This decade allowed for women to do more things instead of just housework. Equality seemed more and more attainable in this decade as women had more opportunities just as the men.

    4. The 1920s also witnessed the maturation of professional sports. Play-by-play radio broadcasts of collegiate and professional sporting events marked a new era for sports, despite the racial segregation in most.

      Sports has a way of changing the focus on to only the sport and its outcome. It was a new form of entertainment and a way that different peoples can come together.

    5. “Change is in the very air Americans breathe, and consumer changes are the very bricks out of which we are building our new kind of civilization,” announced marketing expert and home economist Christine Frederick in her influential 1929 book, Selling Mrs. Consumer (which she incidentally dedicated to Herbert Hoover).

      Most people aren't ready for a change and like things to stay the way they are, but I think people have to accept that life is always changing.

    6. In addition to his very clear support of business interests over labor, Harding’s presidency would go down in history as among the most corrupt.

      Harding actions for the wealthy to pay less taxes only made those who were not pay more to make up for it. Harding claimed to bring America back to normalcy but only pushed further away.

    1. natural

      I know this is contentious territory in this group, but the relationship between "natural" and "ethical" is complicated. There are many things that are natural but unethical. The real question is: what are the criteria that we might use to judge natural things as being ethical or unethical? Singer seems to have some.

    2. A levelized morality that is rational, global, and actively meliorist fits almost perfectly with this new-age liberalism. This levelized morality can be calculated and outsourced just the same as a manufacturing job. If, for example, it’s more efficient to make an air conditioner in Mexico than in Ohio, then you gut the town in Ohio and ship the parts from Mexico. With EA’s levelized morality, if your money is most effective fighting malaria in Africa, then you stop caring about your neighbors and outsource your moral caring there.

      I see the comparison here, and think that there is merit to it. The "outsourcing" point is particularly strong--i.e. it is tempting to outsource moral actions to simplified optimization functions, which entice us to jump to conclusions about what is good. The question, though, is whether or not Singer encourages this. That is a tougher case. My sense is that Singer would NOT explicitly endorse that kind of behavior, even if he DOES implicitly endorse it, as a way to nudge people to become "more moral than they might otherwise be" according to his tastes.

    3. All humans lean on moral frameworks to make daily decisions, structure their lives, decide what to do with their time, and determine how to act in the world, including elites.

      Important point. People, especially those who are not philosophers, outsource their moral decision-making and opinion-forming to their "cave" of opinion, and moral habits formed therein.

    4. What I want to convince you of is that the values of neoliberalism don’t just dictate our economic lives but also influence our moral and spiritual lives, and that neoliberalism does so by asserting values that directly conflict with what it is to be human. Fortunately, there is a convenient way to investigate this influence. Gray’s list (“individualist, egalitarian, universalist, and meliorist”), is essentially the philosophy of Peter Singer.

      Calling this out as the thrust of the piece. Is Rudy able to defend this point? (FWIW seems like it's still an interesting argument, even if the neolib/lib distinction is not make perfectly clear.)

    1. There were times when it generated “hallucinations”—that is, it would suggest standards that didn’t make sense or align with the lesson. The key to avoiding these pitfalls was to treat AI as part of a human-centered workflow. AI is great for doing the heavy lifting, but I’ve learned that it’s not meant to produce a final deliverable on its own.

      AI drawbacks and issues

    2. Instead of using the basic chat function, I trained a custom GPT (generative pre-trained transformer) for CEFR standards alignment. I started by uploading a PDF of the CEFR standards, including the rubric specifically designed for teaching world languages.

      AI use described

    3. My team had initially developed our curriculum to align with the ACTFL standards, which are widely used in the United States for world language education, but we decided to show how our curriculum also meets the CEFR standards. It felt like a daunting task. That’s where AI turned what could have been a tedious process into something far more manageable—and teachers can do the same thing with their lessons.

      Problem proposed and AI as the solution.

    1. a dominant belief that “native English = standardEnglish = international intelligibility” (also reigning in the Anglophonecampus examined in Beirut), where students are required to conform toand reproduce putatively fixed and standardized native English speaker(NES)10 norms and criteria of correctness in their academic studies,continues to hold sway (Jenkins 2014, 122)

      This is a predominate view of language even in anglophone Africa. I can confidently speak at least to my experience as a Ghanaian. Up until university, I was taught to aspire to a native-like (standard English) proficiency in speaking and writing which also equates to white-English. As an English major and a sociolinguist, I learned to deconstruct that notion. My class room experiences helped me challenge that supposed ideal of reaching 'native English' = 'Standard English'.

    2. English as a secondlanguage (ESL) course series until demonstrating “mastery” of learningoutcomes through passing final proficiency exams.

      Doesn't UW have something like this? What do such policies mean? Are they in contrast to the translingual approach to pedagogy that we have been preaching?

    3. explicitly stated language policies that position English in relation to thewealth of language resources of the resident and international studentpopulations increasingly defining it

      This brings me to ask, 'Does UW have an explicit language policy? As instructors, how do we acknowledge the linguistic diversity in our classes and teaching materials?

    1. Three sentences on what I just read,

      I believe that BAP is aware of his place in history just like I assume Yuval does. Both authors are not writing as bots recording facts but provide a specialized idological prism to see our current civilization through. Each prisim has its own take, Yuval trying to articulate what the Silicon Valley "Open Conspiracy" types dream of. BAP trying to remind us what it was like to actually be part of history.

      The "Why don't CEO's have Harrem's" is the one thing here that is going to stick with me. The women of today are so different from the past. In fact maybe the "Brave New World" reality of nameless sex with strangers and nude play as children is a more desireable world to the Incel, video game, monster can drinking of today.

      It seems like the Puritan/Christian sexual practices have really shaped the west into becoming what it is today. I believe most men get their sense of identity from the type of sex they have access to. What's weird about modernity is that we are talking about sex rahter than women with the inherent consideration of children.

      This population collapse, as articulated on the Georga Guide Stones, is going to be interesting.

      What is the Opposite of "The Open Conspiracy"

    2. Unfortunately, too much of our era has an emotionally negative predisposition toward too many things, including our current elites, and for reasons that are mimetic rather than justified, whether rationally or even by our impulses to breed.

      I think this is why Curtis Yarvin's first instruction in Gray Mirror is to detach

    3. “I will add only that Nietzsche says somewhere that it is the duty of a philosopher to promote precisely those virtues or tendencies of spirit that are most lacking in one’s own time…”  For all its pretense to the contrary, that is exactly what this book does not achieve.

      I think we could use more "Bronce Age Mindset" right now. But if every other philsopher was promoting that and not just Bap and his little cult +Andrew Tate I agree we might have a problem.

    4. “The chief intention of this study has been to offer an explanation for why the ancient city perceived philosophers as dangerous and as associated with tyrants — to argue that there was something to the ancient prejudice that philosophy was associated with tyranny.”

      Philosphers are a type of Tyrant?

      They create memetic prisons that design people's behaviors.

      They stop people from acting instread requiring people to think and think and think

      Ah philosophers are the origional beurocrats

      I wonder what Greek Philosophers would think of Ayn Rand Objectivism

    1. ChatGPT cybersecurity use cases could provide considerable relief for understaffed SOC teams and help the organization by reducing overall cyber-risk exposure levels.

      A defensive use for cybersecurity from ChatGPT

    2. In the context of ChatGPT, using reverse psychology can entail phrasing your questions or statements in a way that indirectly prompts the AI to generate the desired response.

      A method of bypassing ChatGPT

    3. Using this method, you attempt to override the base data and settings the developers have imbued into ChatGPT.

      Jailbreaking method

    4. jailbreaking” originated in the realm of technology, where it referred to bypassing restrictions on electronic devices to gain greater control over software and hardware

      Jailbreaking ChatGPT to gain greater control

    5. This allows defenders to speed up and automate the incident response process

      Defense

    6. The evolving GenAI tools have been a double-edge sword in cybersecurity

      Important

    7. Generative AI (GenAI) models has been the highlight of digital transformation in the year 2022.

      Important

    8. We believe that this work will contribute to the growing knowledge of GenAI from a cybersecurity perspective, helping the stakeholders better understand the risk, develop an effective defense, and support a secured digital environment.

      This is the bias of the authors for this particular subject

    9. there are ways to bypass the restrictions imposed on these models using jailbreaking, reverse psychology and other techniques,

      Techniques used to bypass GenAI safeguards put in to prevent these attacks

    1. The

      It’s the first study with enough data to do this kind of comparison, and it offers strong evidence about the factors that influence people’s chances of moving beyond the economic status they were born into. Some of the key factors include education, family structure, and the economic setup of the cities people live in.

    1. Caesar cried 'Help me, Cassius, or I sink!' I, as Aeneas, our great ancestor, Did from the flames of Troy upon his shoulderMythological ReferenceTrojan War[Click to launch video.] The old Anchises bear, so from the waves of Tiber Did I the tirèd Caesar.

      This is a simile because there is a comparison God and him.

    2. The troubled Tiber chafing with her shores

      This is pathos and personification.

    3. In awe of such a thing as I myself. I was born free as Caesar, so were you; We both have fed as well, and we can both Endure the winter's cold as well as he.

      This piece shows the themes of equality and the value of every individual.

    1. And the same principle applies excellently to those who not being rich take old age hard; for neither would the reasonable man find it altogether easy to endure old age conjoined with poverty, nor would the unreasonable man by the attainment of riches ever attain to self-contentment and a cheerful temper.

      Connect Cephalus’s discussion of the value of wealth (329e ff. (Greek)) with Aristotle’s comments about the connection between wealth and happiness (eudaimonia) (NE I.4 1095a18-26 (Greek), I.5 1096a5-7 (Greek), I.8 1099a31-1099b9 (Greek), I.9 1099b26-29 (Greek)). (Christiana Olfert)

    1. Looking up a topic up on the internet, getting ideas, and writing about it is very different from copying sections from an article without attribution. Similarly, direct copying from content produced by generative AI tools requires disclosure, but using that content for ideation does not. Consider also the need for accountability. Blindly trusting in generative AI output is unwise and often unethical. AI output cannot be cited because it is not referenceable. Validating AI output by consulting reliable sources to arrive at a sound conclusion is surely reasonable.

      Sounds like we should be teaching people to skip the middleman (middle bot?) and just go to the “reliable sources,” then, huh?

    1. One of the early ways of social communication across the internet was with Email, which originated in the 1960s and 1970s. These allowed people to send messages to each other, and look up if any new messages had been sent to them.

      It's also interesting to know that the first ever version of the internet was just a connection of multiple computers at first and then evolved into this network where users could only read, to now doing so many stuff with it.

    1. Come lovely and soothing death, Undulate round the world, serenely arriving, arriving, In the day, in the night, to all, to each, Sooner or later delicate death. Prais’d be the fathomless universe, For life and joy, and for objects and knowledge curious, And for love, sweet love—but praise! praise! praise! For the sure-enwinding arms of cool-enfolding death. Dark mother always gliding near with soft feet, Have none chanted for thee a chant of fullest welcome? Then I chant it for thee, I glorify thee above all, I bring thee a song that when thou must indeed come, come unfalteringly. Approach strong deliveress, When it is so, when thou hast taken them I joyously sing the dead, Lost in the loving floating ocean of thee, Laved in the flood of thy bliss O death. From me to thee glad serenades, Dances for thee I propose saluting thee, adornments and feastings for thee, And the sights of the open landscape and the high-spread sky are fitting, And life and the fields, and the huge and thoughtful night. The night in silence under many a star, The ocean shore and the husky whispering wave whose voice I know, And the soul turning to thee O vast and well-veil’d death, And the body gratefully nestling close to thee. Over the tree-tops I float thee a song, Over the rising and sinking waves, over the myriad fields and the prairies wide, Over the dense-pack’d cities all and the teeming wharves and ways, I float this carol with joy, with joy to thee O death.

      In the seven consecutive unrhymed four-line stanzas, Whitman provides the song's lyrics. An apostrophe directly addresses the celebration of death in these stanzas. Whitman wishes for death to arrive since he believes it will eventually come to everyone, day or night, and he sees it as a peaceful incident. He praises the universe and love in the second of these stanzas, but he also hails death, as if it were an equal partner in love. He addresses death as a mother and welcomes her in the song's third verse. The fifth verse claims that Whitman will sing with the dead when their time comes since death is an ocean of love and happiness, using the bird's song as a metaphor. This subject is carried over into the last three stanzas of the bird's song. Death, for body and soul alike, is welcome wherever it occurs. The song in favor of death is spread throughout the nation, over cities, fields, and prairies, as the final verse makes clear. It is a song of joy even if it is a song of death.

    2. Comrades mine and I in the midst, and their memory ever to keep, for the dead I loved so well, For the sweetest, wisest soul of all my days and lands—and this for his dear sake, Lilac and star and bird twined with the chant of my soul,

      Whitman leaves behind his vision of the battlefield, the lilac plant blooming in the dooryard, the sight of the evening star, and the song of the bird and the song it inspired in him. But for the sake of the deceased guy he loved, he will always remember them all.

    3. Sadly sinking and fainting, as warning and warning, and yet again bursting with joy,

      Leaves all of these memories behind with joy

    1. I bequeath myself to the dirt to grow from the grass I love, If you want me again look for me under your boot-soles.

      death? Decomposing in the earth? Reminds me of Wendell Berry's poems about dying and nature

    2. My lovers suffocate me, Crowding my lips, thick in the pores of my skin, Jostling me through streets and public halls, coming naked to me at night, Crying by day Ahoy! from the rocks of the river, swinging and chirping over my head, Calling my name from flower-beds, vines, tangled underbrush, Lighting on every moment of my life, Bussing my body with soft balsamic busses, Noiselessly passing handfuls out of their hearts and giving them to be mine.

      he lives a busy life I guess

    3. Making a fetich of the first rock or stump, powowing with sticks in the circle of obis, Helping the llama or brahmin as he trims the lamps of the idols, Dancing yet through the streets in a phallic procession,

      not sure what's going on here...

    1. I found it really interesting how updates and information was shared before the rise of the internet. Particularly the grafiti updates. I think that it was a creative way to share information to a large amount of people.

  4. docdrop.org docdrop.org
    1. whites

      This part of the reaiding racial disparities in housing opportunities in the mid-20th century. White Americans had the privilege of choosing where to live. At the same time, Black Americans were restricted by racial covenants—legal agreements that prevented the sale of property to non-white buyers—and racist realtors, limiting their housing options to industrial suburbs like Ferguson, located on the north side of the city.

    1. I found it interesting that as the popularity of social media grew the urge to create a version of social media that had no restrictions grew as-well. I think this led tot he creation of 4Chan and Something Awful. This goes to show how Social Media can turn morally unethical really quickly.