217 Matching Annotations
  1. Nov 2022
    1. The @id keyword allows you to give a node a URI. This URI identifies the node. See Node Identifiers in the JSON-LD spec. (The equivalent in Microdata is the itemid attribute, and the equivalent in RDFa Lite is the resource attribute.)
  2. Oct 2022
  3. Sep 2022
  4. Aug 2022
  5. Jul 2022
    1. ```python doi_regexp = re.compile( r"(doi:\s|(?:https?://)?(?:dx.)?doi.org/)?(10.\d+(.\d+)/.+)$", flags=re.I ) """See http://en.wikipedia.org/wiki/Digital_object_identifier."""

      handle_regexp = re.compile( r"(hdl:\s|(?:https?://)?hdl.handle.net/)?" r"([^/.]+(.[^/.]+)/.)$", flags=re.I ) """See http://handle.net/rfc/rfc3651.html. <Handle> = <NamingAuthority> "/" <LocalName> <NamingAuthority> = (<NamingAuthority> ".") <NAsegment> <NAsegment> = Any UTF8 char except "/" and "." <LocalName> = Any UTF8 char """

      arxiv_post_2007_regexp = re.compile(r"(arxiv:)?(\d{4}).(\d{4,5})(v\d+)?$", flags=re.I) """See http://arxiv.org/help/arxiv_identifier and http://arxiv.org/help/arxiv_identifier_for_services."""

      arxiv_pre_2007_regexp = re.compile( r"(arxiv:)?([a-z-]+)(.[a-z]{2})?(/\d{4})(\d+)(v\d+)?$", flags=re.I ) """See http://arxiv.org/help/arxiv_identifier and http://arxiv.org/help/arxiv_identifier_for_services."""

      arxiv_post_2007_with_class_regexp = re.compile( r"(arxiv:)?(?:[a-z-]+)(?:.[a-z]{2})?/(\d{4}).(\d{4,5})(v\d+)?$", flags=re.I ) """Matches new style arXiv ID, with an old-style class specification; technically malformed, however appears in real data."""

      hal_regexp = re.compile(r"(hal:|HAL:)?([a-z]{3}[a-z]*-|(sic|mem|ijn)_)\d{8}(v\d+)?$") """Matches HAL identifiers (sic mem and ijn are old identifiers form)."""

      ads_regexp = re.compile(r"(ads:|ADS:)?(\d{4}[A-Za-z]\S{13}[A-Za-z.:])$") """See http://adsabs.harvard.edu/abs_doc/help_pages/data.html"""

      pmcid_regexp = re.compile(r"PMC\d+$", flags=re.I) """PubMed Central ID regular expression."""

      pmid_regexp = re.compile( r"(pmid:|https?://pubmed.ncbi.nlm.nih.gov/)?(\d+)/?$", flags=re.I ) """PubMed ID regular expression."""

      ark_suffix_regexp = re.compile(r"ark:/[0-9bcdfghjkmnpqrstvwxz]+/.+$") """See http://en.wikipedia.org/wiki/Archival_Resource_Key and https://confluence.ucop.edu/display/Curation/ARK."""

      lsid_regexp = re.compile(r"urn:lsid:[^:]+(:[^:]+){2,3}$", flags=re.I) """See http://en.wikipedia.org/wiki/LSID."""

      orcid_urls = ["http://orcid.org/", "https://orcid.org/"]

      gnd_regexp = re.compile( r"(gnd:|GND:)?(" r"(1|10)\d{7}[0-9X]|" r"[47]\d{6}-\d|" r"[1-9]\d{0,7}-[0-9X]|" r"3\d{7}[0-9X]" r")" ) """See https://www.wikidata.org/wiki/Property:P227."""

      gnd_resolver_url = "http://d-nb.info/gnd/"

      sra_regexp = re.compile(r"[SED]R[APRSXZ]\d+$") """Sequence Read Archive regular expression. See https://www.ncbi.nlm.nih.gov/books/NBK56913/#search.what_do_the_different_sra_accessi """

      bioproject_regexp = re.compile(r"PRJ(NA|EA|EB|DB)\d+$") """BioProject regular expression. See https://www.ddbj.nig.ac.jp/bioproject/faq-e.html#project-accession https://www.ebi.ac.uk/ena/submit/project-format https://www.ncbi.nlm.nih.gov/bioproject/docs/faq/#under-what-circumstances-is-it-n """

      biosample_regexp = re.compile(r"SAM(N|EA|D)\d+$") """BioSample regular expression. See https://www.ddbj.nig.ac.jp/biosample/faq-e.html https://ena-docs.readthedocs.io/en/latest/submit/samples/programmatic.html#accession-numbers-in-the-receipt-xml https://www.ncbi.nlm.nih.gov/biosample/docs/submission/faq/ """

      ensembl_regexp = re.compile( r"({prefixes})(E|FM|G|GT|P|R|T)\d{{11}}$".format( prefixes="|".join(ENSEMBL_PREFIXES) ) ) """Ensembl regular expression. See https://asia.ensembl.org/info/genome/stable_ids/prefixes.html """

      uniprot_regexp = re.compile( r"([A-NR-Z]0-9{1,2})|" r"([OPQ][0-9][A-Z0-9]{3}[0-9])(.\d+)?$" ) """UniProt regular expression. See https://www.uniprot.org/help/accession_numbers """

      refseq_regexp = re.compile( r"((AC|NC|NG|NT|NW|NM|NR|XM|XR|AP|NP|YP|XP|WP)|" r"NZ[A-Z]{4})\d+(.\d+)?$" ) """RefSeq regular expression. See https://academic.oup.com/nar/article/44/D1/D733/2502674 (Table 1) """

      genome_regexp = re.compile(r"GC[AF]_\d+.\d+$") """GenBank or RefSeq genome assembly accession. See https://www.ebi.ac.uk/ena/browse/genome-assembly-database """

      geo_regexp = re.compile(r"G(PL|SM|SE|DS)\d+$") """Gene Expression Omnibus (GEO) accession. See https://www.ncbi.nlm.nih.gov/geo/info/overview.html#org """

      arrayexpress_array_regexp = re.compile( r"A-({codes})-\d+$".format(codes="|".join(ARRAYEXPRESS_CODES)) ) """ArrayExpress array accession. See https://www.ebi.ac.uk/arrayexpress/help/accession_codes.html """

      arrayexpress_experiment_regexp = re.compile( r"E-({codes})-\d+$".format(codes="|".join(ARRAYEXPRESS_CODES)) ) """ArrayExpress array accession. See https://www.ebi.ac.uk/arrayexpress/help/accession_codes.html """

      ascl_regexp = re.compile(r"^ascl:[0-9]{4}.[0-9]{3,4}$", flags=re.I) """ASCL regular expression."""

      swh_regexp = re.compile( r"swh:1:(cnt|dir|rel|rev|snp):[0-9a-f]{40}" r"(;(origin|visit|anchor|path|lines)=\S+)*$" ) """Matches Software Heritage identifiers."""

      ror_regexp = re.compile(r"(?:https?://)?(?:ror.org/)?(0\w{6}\d{2})$", flags=re.I) """See https://ror.org/facts/#core-components.""" ```

  6. Jun 2022
    1. The bearerURI for a VHF/FM service is compiled as follows:fm:<gcc>.<pi>.<frequency>The <frequency> element may be replaced by the asterisk ("*") character to signify any frequency. In this case the PIcode alone shall be used by the device to locate the source
      Table 4: Example of RadioDNS bearerURI construction for RDS/RBDS

      | GCC | PI | Frequency (MHz) | RadioDNS bearerURI | |-----|------|------------------|--------------------| | ce1 | c586 | 95,8 | fm:ce1.c586.09580 | | de0 | d1e0 | 103,9 | fm:de0.d1e0.10390 | | ce1 | c201 | many | fm:ce1.c201.* |

  7. May 2022
    1. ORCID est structuré conformément à la norme ISNI et les deux organisations ont signé un accord pour asseoir et améliorer leur interopérabilité. Ainsi, ORCID utilise l’ISNI pour l’identification des institutions auxquelles les chercheurs sont affiliés.
    1. Signposting is an approach to make the scholarly web more friendly to machines. It uses Typed Links as a means to clarify patterns that occur repeatedly in scholarly portals. For resources of any media type, these typed links are provided in HTTP Link headers. For HTML resources, they may additionally be provided in HTML link elements. Throughout this site, examples use the former approach.

      http HTTP/1.1 302 Found Server: Apache-Coyote/1.1 Vary: Accept Location: http://www.dlib.org/dlib/november15/vandesompel/11vandesompel.html Link: <http://orcid.org/0000-0002-0715-6126> ; rel="author", <http://orcid.org/0000-0003-3749-8116> ; rel="author" Expires: Tue, 31 May 2016 17:18:50 GMT Content-Type: text/html;charset=utf-8 Content-Length: 217 Date: Tue, 31 May 2016 16:38:15 GMT Connection: keep-alive

    1. Exemplar output (in JSON)

      json [ { "oci": "02001010806360107050663080702026306630509-0200101080636102703040309", "citing": "10.1186/1756-8722-6-59", "cited": "10.1186/ar3439", "creation": "2013", "timespan": "P2Y", "journal_sc": "no", "author_sc": "no" }, { "oci": "02001010806360107050663080702026306630509-0200101080636102704000806", "citing": "10.1186/1756-8722-6-59", "cited": "10.1186/ar4086", "creation": "2013", "timespan": "P1Y", "journal_sc": "no", "author_sc": "no" }, { "oci": "02001010806360107050663080702026306630509-020010200003619122437020001023704023707090006", "citing": "10.1186/1756-8722-6-59", "cited": "10.1200/jco.2012.42.7906", "creation": "2013", "timespan": "P0Y", "journal_sc": "no", "author_sc": "no" }, { "oci": "02001010806360107050663080702026306630509-02003010009360008080300010805370200010237060604070907", "citing": "10.1186/1756-8722-6-59", "cited": "10.3109/08830185.2012.664797", "creation": "2013", "timespan": "P0Y", "journal_sc": "no", "author_sc": "no" }

    1. COCI, the OpenCitations Index of Crossref open DOI-to-DOI citations

      COCI, the OpenCitations Index of Crossref open DOI-to-DOI citations, is an RDF dataset containing details of all the citations that are specified by the open references to DOI-identified works present in Crossref, as of the latest COCI update*

      [...]

      Open Citation Identifiers

      Each Open Citation Identifier [[OCI]] has a simple structure: the lower-case letters "oci" followed by a colon, followed by two numbers separated by a dash (e.g. https://w3id.org/oc/index/coci/ci/02001010806360107050663080702026306630509-02001010806360107050663080702026305630301), in which the first number identifies the citing work and the second number identifies the cited work.

    1. |Prefix|Supplier|Identifier type|Example| |--- |--- |--- |--- | |010|Wikidata|Wikidata Identifier (QID)|oci:01027931310-01022252312| |020|Crossref|Digital Object Identifier (DOI)|oci:02001010806360107050663080702026306630509-02001010806360107050663080702026305630301| |030|OpenCitations Corpus|OpenCitations Corpus Internal Identifier|oci:0301-03018| |040|Dryad|Digital Object Identifier (DOI)|oci:040050006013613273410133708070900-04003070302361019113701000000040801| |050|CROCI|Digital Object Identifier (DOI)|oci:05001000106361937321411281422370200010237000837000001-050010008073602000009020002|

    1. http://geohash.org/c216ne:Mt_Hood http://geohash.org/?q=45.37,-121.7&format=gpx http://geohash.org/?q=45.37,-121.7&format=url&redirect=0

      • osm — open the location in OpenStreetMaps
      • gmaps — open the location in Google Maps
      • gc — go to the nearest geocaches in Geocaching.com
      • gpx — go directly to GPX download page
      • garmin — go directly to Garmin download page
      • text — show coordinates as plain text
      • url — show Geohash URL as plain text
      • maxlen — maximum length of the Geohash
    1. hash://sha256/9f86d081884c7d659a2feaa0?type=text/plain#top \__/ \____/ \______________________/ \_____________/ \_/ | | | | | scheme algorithm hash query fragment

    1. Creating a New Identifier

      If you would like to add or update a permanent identifier of the form https://w3id.org/..., the preferred procedure is to perform the following steps:

      The maintainers of this system will then act on that Pull Request and merge it into this system's content. You will then be able to see your changes in the repository and via resolution of the identifier you created or edited.

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    1. GeneName: DICER1 syndrome (pleuropulmonary blastoma familial tumor susceptibility syndrome), PMID (PubMed ID): 29762508, HGNCID: 17098, Inheritance pattern: autosomal-dominant disease, Disease entity: Plueropulomary Blastoma, Mutation: Somatic, Zygosity: heterozygous, Variant: multiple variants, Family information: NA, Case: young children, CasePresentingHPO: N/A, CasePreviousTesting: N/A, Gnomade #: N/A , Mutation type: deletion

  8. Apr 2022
    1. ORCID identifier types

      | Name | Description | Resolution Prefix | Case sensitive | Primary use | |----------------|---------------------------------------------------------------------------------|-------------------------------------------------|--------------------|-----------------| | agr | agr: Agricola | false | work | | ark | ark: Archival Resource Key Identifier | true | work | | arxiv | arxiv: ArXiv | https://arxiv.org/abs/ | false | work | | asin | asin: Amazon Standard Identification Number | http://www.amazon.com/dp/ | false | work | | asin-tld | asin-tld: ASIN top-level domain | false | work | | authenticusid | authenticusid: AuthenticusID | https://www.authenticus.pt/ | false | work | | bibcode | Bibcode | http://adsabs.harvard.edu/abs/ | true | work | | cba | cba: Chinese Biological Abstracts | false | work | | cienciaiul | cienciaiul: Ciência-IUL Identifier | https://ciencia.iscte-iul.pt/id/ | false | work | | cit | cit: CiteSeer | false | work | | ctx | ctx: CiteExplore submission | false | work | | dnb | dnb: German National Library identifier | https://d-nb.info/ | false | work | | doi | doi: Digital object identifier | https://doi.org/ | false | work | | eid | Scopus Identifier | false | work | | emdb | emdb: Electron Microscopy Data Bank | https://www.ebi.ac.uk/emdb/ | true | work | | empiar | empiar: Electron Microscopy Public Image Archive | https://www.ebi.ac.uk/empiar/ | true | work | | ethos | ethos: EThOS Peristent ID | http://ethos.bl.uk/OrderDetails.do?uin= | false | work | | grant_number | grant number | false | work | | hal | hal: Hyper Articles en Ligne | https://hal.archives-ouvertes.fr/view/resolver/ | false | work | | handle | handle: Handle | http://hdl.handle.net/ | false | work | | hir | hir: NHS Evidence | false | work | | isbn | isbn: International Standard Book Number | https://www.worldcat.org/isbn/ | false | work | | ismn | ismn: International Standard Music Number | false | work | | issn | issn: International Standard Serial Number. Includes print and electronic ISSN. | https://portal.issn.org/resource/ISSN/ | false | work | | jfm | jfm: Jahrbuch über die Fortschritte der Mathematik | http://zbmath.org/?format=complete&q=an%3A | false | work | | jstor | jstor: JSTOR abstract | http://www.jstor.org/stable/ | false | work | | kuid | kuid: KoreaMed Unique Identifier | https://koreamed.org/article/ | false | work | | lccn | lccn: Library of Congress Control Number | http://lccn.loc.gov/ | false | work | | lensid | lensid: Lens ID | https://www.lens.org/ | false | work | | mr | mr: Mathematical Reviews | http://www.ams.org/mathscinet-getitem?mr= | false | work | | oclc | oclc: Online Computer Library Center | http://www.worldcat.org/oclc/ | false | work | | ol | ol: Open Library | http://openlibrary.org/b/ | false | work | | osti | osti: Office of Scientific and Technical Information | https://www.osti.gov/biblio/ | false | work | | other-id | Other identifier type | false | work | | pat | Patent number | false | work | | pdb | pdb: Protein Data Bank identifier | http://identifiers.org/pdb/ | false | work | | pmc | pmc: PubMed Central article number | https://europepmc.org/article/pmc/ | false | work | | pmid | pmid: PubMed Unique Identifier | https://pubmed.ncbi.nlm.nih.gov/ | false | work | | ppr | ppr: Europe PMC Preprint Identifier | https://europepmc.org/article/PPR/ | false | work | | proposal-id | Proposal ID | false | work | | rfc | rfc: Request for Comments | https://tools.ietf.org/html/ | false | work | | rrid | rrid: Research Resource IDentifier | https://identifiers.org/rrid/ | true | work | | source-work-id | Non-standard ID from work data source | false | work | | ssrn | ssrn: Social Science Research Network | http://papers.ssrn.com/abstract_id= | false | work | | uri | uri: URI | true | work | | urn | urn: URN | false | work | | wosuid | wosuid: Web of Science™ identifier | false | work | | zbl | zbl: Zentralblatt MATH | http://zbmath.org/?format=complete&q= | false | work |

  9. Mar 2022
    1. The URN “urn:iso:std:iso:19719:ed-1:v1:en,fr” denotes the first version of the first edition of ISO 19719, which is published bilingually in English and French.
    1. What Is A DMR Radio ID? A Radio ID is a unique number assigned to you (and your callsign) by the RadioID.net Team. Like a telephone number or IP address, your Radio ID identifies you as a unique radio user on the various DMR networks and repeaters around the world.
    1. N2T keeps identifiers persistent, forwarding them to the best known web addresses Partners with EZID.cdlib.org, Identifiers.org, Archive.org, YAMZ.net metadictionary Any kind of name – ARK, DOI, URN, Handle, PMID, PDB, Taxon, GRID, arxiv, ISSN, ...

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    URL

    1. Archival Resource Keys (ARKs) serve as persistent identifiers, or stable, trusted references for information objects. Among other things, they aim to be web addresses (URLs) that don’t return 404 Page Not Found errors.
  10. Feb 2022
    1. In a nutshell, an MBID is a 36 character Universally Unique Identifier that is permanently assigned to each entity in the database, i.e. artists, release groups, releases, recordings, works, labels, areas, places and URLs. MBIDs are also assigned to Tracks, though tracks do not share many other properties of entities. For example, the artist Queen has an artist MBID of 0383dadf-2a4e-4d10-a46a-e9e041da8eb3, and their song Bohemian Rhapsody has a recording MBID of b1a9c0e9-d987-4042-ae91-78d6a3267d69.
    1. Contemporary digital learning technologies generate, store, and share terabytes of learner data—which must flow seamlessly and securely across systems. To enable interoperability and ensure systems can perform at-scale, the ADL Initiative is developing the Data and Training Analytics Simulated Input Modeler (DATASIM), a tool for producing simulated learner data that can mimic millions of diverse user interactions. view image full screen DATASIM application screen capture. DATASIM is an open-source platform for generating realistic Experience Application Programming Interface (xAPI) data at very large scale. The xAPI statements model realistic behaviors for a cohort of simulated learner/users, producing tailorable streams of data that can be used to benchmark and stress-test systems. DATASIM requires no specialized hardware, and it includes a user-friendly graphical interface that allows precise control over the simulation parameters and learner attributes.
    1. The video profile of the xAPI was created to identify and standardize the common types of interactions that can be tracked in any video player.
  11. Jan 2022
    1. xAPI Wrapper Tutorial Introduction This tutorial will demonstrate how to integrate xAPI Wrapper with existing content to capture and dispatch learning records to an LRS.

      roll your own JSON rather than using a service like xapi.ly

    1. Storyline 360 xAPI Updates (Winter 2021)Exciting xAPI update for Storyline users! Articulate has updated Storyline 360 to support custom xAPI statements alongside a few other xAPI-related updates. (These changes will likely come to Storyline 3 soon, though not as of November 30, 2021.)
    1. Making xAPI Easier Use the xapi.ly® Statement Builder to get more and better xAPI data from elearning created in common authoring platforms. xapi.ly helps you create the JavaScript triggers to send a wide variety of rich xAPI statements to the Learning Record Store (LRS) of your choice.

      criteria for use and pricing listed on site