- Apr 2022
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twitter.com twitter.com
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Dr Emma Hodcroft [@firefoxx66]. (2021, November 26). We now have B.1.1.529 sequences (designed at @nextstrain clade 21K) up in our Africa build. You can check them out below. These are from South Africa & Botswana—You can see the high number of mutations. CoVariants focal build & updates will come ASAP. https://t.co/fqBldneF5U [Tweet]. Twitter. https://twitter.com/firefoxx66/status/1464145615571623938
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twitter.com twitter.com
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ReconfigBehSci [@SciBeh]. ‘RT @firefoxx66: The @nextstrain Http://CoVariants.Org Focal Build for 21K (B.1.1.529) Is Now Live. Http://Nextstrain.Org/Groups/Neherlab/Ncov/21K As Previously…’. Tweet. Twitter, 26 November 2021. https://twitter.com/SciBeh/status/1464265981220560901.
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- Feb 2022
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elifesciences.org elifesciences.org
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Li, Z., Tomlinson, A. C., Wong, A. H., Zhou, D., Desforges, M., Talbot, P. J., Benlekbir, S., Rubinstein, J. L., & Rini, J. M. (2019). The human coronavirus HCoV-229E S-protein structure and receptor binding. ELife, 8, e51230. https://doi.org/10.7554/eLife.51230
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- Dec 2021
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twitter.com twitter.com
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Trevor Bedford. (2021, December 11). We find that logistic growth of Omicron sequence fraction looks similar between the UK, the US and Germany with roughly 1% of sequenced cases in all three countries being Omicron on Dec 1. 3/10 https://t.co/De0t2xreU9 [Tweet]. @trvrb. https://twitter.com/trvrb/status/1469784757261127685
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- Jun 2021
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twitter.com twitter.com
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ReconfigBehSci. (2021, June 14). RT @AdamJKucharski: Compare relationship between R and proportion of sequences consistent with the B.1.1.7 variant in autumn 2020 (below le… [Tweet]. @SciBeh. https://twitter.com/SciBeh/status/1404604886117797888
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pragmaticstudio.com pragmaticstudio.com
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cookie-based authentication goes something like this:
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Token-Based Authentication
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www.mutuallyhuman.com www.mutuallyhuman.com
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I’m going to represent tests as sequence diagrams (handily created via plantuml) rather than actually coding them out. For me the diagrams make it easier to talk about what the tests do without getting bogged down by how they do it.
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I’m going to add the API Server as an actor to my first test sequence to give some granularity as to what I’m actually testing.
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- May 2021
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journals.plos.org journals.plos.org
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It is worth noting that no instructions were provided to the participants with respect to sequence, yet this measure exhibited the largest effect size of any of the parameters measured
They should have mentioned this before. Not knowing what the function does, I'm curious to see how abysmal the sequence numbers were for the control group.
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- Apr 2021
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blogs.bmj.com blogs.bmj.com
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Nabavi, N., & Dobson, J. (2021, April 21). Covid-19 new variants—known unknowns. The BMJ Opinion. https://blogs.bmj.com/bmj/2021/04/21/covid-19-new-variants-known-unknowns/?utm_campaign=shareaholic&utm_medium=twitter&utm_source=socialnetwork
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www.bio-rad.com www.bio-rad.com
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unexpected extra cluster of positive droplets with fluorescence intensity less than the cluster containing the target of interest can be caused by a sequence variant in the target of interest
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- Mar 2021
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Volz, E., Mishra, S., Chand, M. et al. Assessing transmissibility of SARS-CoV-2 lineage B.1.1.7 in England. Nature (2021). https://doi.org/10.1038/s41586-021-03470-x
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virological.org virological.org
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Virological. ‘Recombinant SARS-CoV-2 Genomes Involving Lineage B.1.1.7 in the UK - SARS-CoV-2 Coronavirus / SARS-CoV-2 Molecular Evolution’, 17 March 2021. https://virological.org/t/recombinant-sars-cov-2-genomes-involving-lineage-b-1-1-7-in-the-uk/658.
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- Feb 2021
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en.wikipedia.org en.wikipedia.org
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A sequence diagram shows object interactions arranged in time sequence.
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- Sep 2020
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www.nature.com www.nature.com
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Krammer, Florian. ‘SARS-CoV-2 Vaccines in Development’. Nature, 23 September 2020, 1–16. https://doi.org/10.1038/s41586-020-2798-3.
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- Aug 2020
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www.nature.com www.nature.com
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Corbett, K. S., Edwards, D. K., Leist, S. R., Abiona, O. M., Boyoglu-Barnum, S., Gillespie, R. A., Himansu, S., Schäfer, A., Ziwawo, C. T., DiPiazza, A. T., Dinnon, K. H., Elbashir, S. M., Shaw, C. A., Woods, A., Fritch, E. J., Martinez, D. R., Bock, K. W., Minai, M., Nagata, B. M., … Graham, B. S. (2020). SARS-CoV-2 mRNA vaccine design enabled by prototype pathogen preparedness. Nature, 1–8. https://doi.org/10.1038/s41586-020-2622-0
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- Mar 2020
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www.education.gouv.fr www.education.gouv.fr
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Mon enfant doit-il faire la séquence d’observation prévue sur une des semaines à venir?La santé des Français est la priorité du gouvernement. Au nom du principe de précaution, il est préconisé d’annuler ces séquences d’observation ou de les reporteren lien avec la structure d’accueil du stage.
Il est plus que préconisé à mon sens
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- Jan 2019
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urbigenous.net urbigenous.net
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Automatic Sequence Computer
The Harvard Mark 1 was an ASCC or an Automated Sequence Controlled Calculator(https://en.wikipedia.org/wiki/Harvard_Mark_I) - so Clarke was using this term for what was possibly the most powerful computer during his time. Our smartphones now are more powerful than several of these ASCCs
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- Oct 2018
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en.wikipedia.org en.wikipedia.org
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It has been demonstrated that this formulation is almost equivalent to a SLIM model,[9] which is an item-item model based recommender
So a pre-trained item model can be used to make such recommendations.
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- Jul 2018
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wendynorris.com wendynorris.com
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One of the foremost contributions of Saussure to semiology was his claim that indi- vidual signs are always part of larger systemic wholes and that the meaning of any particular sign is essentially a function of the way in which it is related to other signs within the same system of signification. Finding out the meaning of any particular sign thus is possible only within the context of the entire symbolic system within which it is anchored, since it is necessary to first examine its relations to other signs wit
This points to another friction point for SBTF data and the crowdsourcing process.
Sequences in social media timelines are often arbitrary per obscure user settings and unknown/uncontrollable algorithmic priorities. That affects data collection.
There are also SBTF processes that cause workflow frictions because of a lack of sequence specificity in order of social coordination activities or a desire for order from the volunteers.
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Along similar lines, while the sequential order in which we arrange items is usually indicative of their relative priority to us, the essence of such a symbolic relationship is by no means unproblematic
The sequence of events may be arbitrary and does not always signify importance.
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- Apr 2018
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www.uniprot.org www.uniprot.org
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AAIEAGRLFL
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- Aug 2017
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www.imdb.com www.imdb.com
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Indy flies to Nepal (followed by a Nazi agent, Toht (Ronald Lacey)) to confront Marion Ravenwood, who runs a restaurant and bar (and who can outdrink anyone) because he needs the headpiece to the Staff of Ra, whose crystals will allow him to determine the exact location of the Ark. Marion, still bitter over their breakup, nonetheless accepts when Indy offers her $3,000 and the promise of more when they return stateside. She is cryptic about the headpiece, and after Indy leaves she ponders it as she wears it around her neck.
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Toht and several Sherpa heavies enter the bar and hold Marion hostage, with Toht ready to torture her for the headpiece. Indy returns and a firefight erupts during which the fireplace is dislodged and the building begins burning down. Toht finds the headpiece but when he grabs it he's badly burned -- leaving an image of one side of the headpiece branded on his hand. He escapes while Indy and Marion do likewise and fly to Egypt to see Indy's pal, Sallah (John Rhys-Davies), who is working on the Nazi site and who reveals that the Nazis are aided by a French archaeologist (Belloq).
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Later, while shopping at a Cairo bazaar, Indy and Marion are attacked by sword-wielding Arabs working for Nazi agents. Indy fights them off but in the confusion Marion is trapped in a large basket and taken by two of the terrorists. The effort to track her down is held up by a man brandishing a sword in intimidating fashion. The swordsman is shot down in short order by a thoroughly unimpressed Indy.
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Annotators
URL
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- Apr 2017
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www.biostars.org www.biostars.org
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I'm the developer of pyGeno. Here's a little script that does just that for the Gene TPST2, by using segment trees
recipe for merging transcripts of a gene into a single compound transcript
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- Oct 2016
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biocontainers.pro biocontainers.pro
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blast
BLAST finds regions of similarity between biological sequences. The program compares nucleotide or protein sequences to sequence databases and calculates the statistical significance.
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- Feb 2016
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docs.google.com docs.google.com
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Generation Chronology
I propose this as a thing. The idea is to create a list of people who have some significance to me whose lives overlap in time.
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